Search of human proteins with 110347414

Search of human proteins with 110347414

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|110347414 fibroblast growth factor receptor substrate 2
[Homo sapiens]
         (508 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|110347414 fibroblast growth factor receptor substrate 2 [Homo...  1040   0.0  
gi|110347408 fibroblast growth factor receptor substrate 2 [Homo...  1040   0.0  
gi|5730059 fibroblast growth factor receptor substrate 3 [Homo s...   441   e-123
gi|4503357 docking protein 1 [Homo sapiens]                            60   6e-09
gi|47575849 docking protein 6 [Homo sapiens]                           55   2e-07
gi|41406050 docking protein 2 [Homo sapiens]                           54   4e-07
gi|221554537 docking protein 3 isoform 1 [Homo sapiens]                52   2e-06
gi|29544726 docking protein 5 [Homo sapiens]                           50   5e-06
gi|20070302 docking protein 4 [Homo sapiens]                           50   6e-06
gi|110349719 titin isoform N2-A [Homo sapiens]                         36   0.095
gi|110349717 titin isoform novex-2 [Homo sapiens]                      36   0.095
gi|110349713 titin isoform novex-1 [Homo sapiens]                      36   0.095
gi|110349715 titin isoform N2-B [Homo sapiens]                         36   0.095
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit...    35   0.21 
gi|111185957 downstream of tyrosine kinase 7 [Homo sapiens]            34   0.28 
gi|7662230 ring finger protein 40 [Homo sapiens]                       34   0.28 
gi|208022661 hypothetical protein LOC57701 [Homo sapiens]              34   0.36 
gi|44771211 mediator complex subunit 13-like [Homo sapiens]            33   0.61 
gi|122692281 hypothetical protein LOC645369 [Homo sapiens]             33   0.61 
gi|61102725 la related protein isoform 2 [Homo sapiens]                33   0.61 
gi|39725634 la related protein isoform 1 [Homo sapiens]                33   0.61 
gi|50658061 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member...    32   1.0  
gi|208431824 forkhead box I3 [Homo sapiens]                            32   1.0  
gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]            32   1.0  
gi|238624188 diffuse panbronchiolitis critical region 1 protein ...    32   1.4  
gi|30061567 La ribonucleoprotein domain family member 2 isoform ...    32   1.4  
gi|10863935 reticulon 1 isoform A [Homo sapiens]                       32   1.4  
gi|5031805 insulin receptor substrate 1 [Homo sapiens]                 32   1.8  
gi|148612879 polyhomeotic like 3 [Homo sapiens]                        32   1.8  
gi|239755199 PREDICTED: hypothetical protein [Homo sapiens]            31   2.3  

>gi|110347414 fibroblast growth factor receptor substrate 2 [Homo
           sapiens]
          Length = 508

 Score = 1040 bits (2688), Expect = 0.0
 Identities = 508/508 (100%), Positives = 508/508 (100%)

Query: 1   MGSCCSCPDKDTVPDNHRNKFKVINVDDDGNELGSGIMELTDTELILYTRKRDSVKWHYL 60
           MGSCCSCPDKDTVPDNHRNKFKVINVDDDGNELGSGIMELTDTELILYTRKRDSVKWHYL
Sbjct: 1   MGSCCSCPDKDTVPDNHRNKFKVINVDDDGNELGSGIMELTDTELILYTRKRDSVKWHYL 60

Query: 61  CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSINVVEEPVVER 120
           CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSINVVEEPVVER
Sbjct: 61  CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSINVVEEPVVER 120

Query: 121 NNHQTELEVPRTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVGE 180
           NNHQTELEVPRTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVGE
Sbjct: 121 NNHQTELEVPRTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVGE 180

Query: 181 ESTHPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSNAESSTPKEEPSSIEDRDP 240
           ESTHPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSNAESSTPKEEPSSIEDRDP
Sbjct: 181 ESTHPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSNAESSTPKEEPSSIEDRDP 240

Query: 241 QILLEPEGVKFVLGPTPVQKQLMEKEKLEQLGRDQVSGSGANNTEWDTGYDSDERRDAPS 300
           QILLEPEGVKFVLGPTPVQKQLMEKEKLEQLGRDQVSGSGANNTEWDTGYDSDERRDAPS
Sbjct: 241 QILLEPEGVKFVLGPTPVQKQLMEKEKLEQLGRDQVSGSGANNTEWDTGYDSDERRDAPS 300

Query: 301 VNKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNINNSAQRRTALLNYENLPSLPPVWE 360
           VNKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNINNSAQRRTALLNYENLPSLPPVWE
Sbjct: 301 VNKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNINNSAQRRTALLNYENLPSLPPVWE 360

Query: 361 ARKLSRDEDDNLGPKTPSLNGYHNNLDPMHNYVNTENVTVPASAHKIEYSRRRDCTPTVF 420
           ARKLSRDEDDNLGPKTPSLNGYHNNLDPMHNYVNTENVTVPASAHKIEYSRRRDCTPTVF
Sbjct: 361 ARKLSRDEDDNLGPKTPSLNGYHNNLDPMHNYVNTENVTVPASAHKIEYSRRRDCTPTVF 420

Query: 421 NFDIRRPSLEHRQLNYIQVDLEGGSDSDNPQTPKTPTTPLPQTPTRRTELYAVIDIERTA 480
           NFDIRRPSLEHRQLNYIQVDLEGGSDSDNPQTPKTPTTPLPQTPTRRTELYAVIDIERTA
Sbjct: 421 NFDIRRPSLEHRQLNYIQVDLEGGSDSDNPQTPKTPTTPLPQTPTRRTELYAVIDIERTA 480

Query: 481 AMSNLQKALPRDDGTSRKTRHNSTDLPM 508
           AMSNLQKALPRDDGTSRKTRHNSTDLPM
Sbjct: 481 AMSNLQKALPRDDGTSRKTRHNSTDLPM 508


>gi|110347408 fibroblast growth factor receptor substrate 2 [Homo
           sapiens]
          Length = 508

 Score = 1040 bits (2688), Expect = 0.0
 Identities = 508/508 (100%), Positives = 508/508 (100%)

Query: 1   MGSCCSCPDKDTVPDNHRNKFKVINVDDDGNELGSGIMELTDTELILYTRKRDSVKWHYL 60
           MGSCCSCPDKDTVPDNHRNKFKVINVDDDGNELGSGIMELTDTELILYTRKRDSVKWHYL
Sbjct: 1   MGSCCSCPDKDTVPDNHRNKFKVINVDDDGNELGSGIMELTDTELILYTRKRDSVKWHYL 60

Query: 61  CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSINVVEEPVVER 120
           CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSINVVEEPVVER
Sbjct: 61  CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSINVVEEPVVER 120

Query: 121 NNHQTELEVPRTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVGE 180
           NNHQTELEVPRTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVGE
Sbjct: 121 NNHQTELEVPRTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVGE 180

Query: 181 ESTHPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSNAESSTPKEEPSSIEDRDP 240
           ESTHPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSNAESSTPKEEPSSIEDRDP
Sbjct: 181 ESTHPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSNAESSTPKEEPSSIEDRDP 240

Query: 241 QILLEPEGVKFVLGPTPVQKQLMEKEKLEQLGRDQVSGSGANNTEWDTGYDSDERRDAPS 300
           QILLEPEGVKFVLGPTPVQKQLMEKEKLEQLGRDQVSGSGANNTEWDTGYDSDERRDAPS
Sbjct: 241 QILLEPEGVKFVLGPTPVQKQLMEKEKLEQLGRDQVSGSGANNTEWDTGYDSDERRDAPS 300

Query: 301 VNKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNINNSAQRRTALLNYENLPSLPPVWE 360
           VNKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNINNSAQRRTALLNYENLPSLPPVWE
Sbjct: 301 VNKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNINNSAQRRTALLNYENLPSLPPVWE 360

Query: 361 ARKLSRDEDDNLGPKTPSLNGYHNNLDPMHNYVNTENVTVPASAHKIEYSRRRDCTPTVF 420
           ARKLSRDEDDNLGPKTPSLNGYHNNLDPMHNYVNTENVTVPASAHKIEYSRRRDCTPTVF
Sbjct: 361 ARKLSRDEDDNLGPKTPSLNGYHNNLDPMHNYVNTENVTVPASAHKIEYSRRRDCTPTVF 420

Query: 421 NFDIRRPSLEHRQLNYIQVDLEGGSDSDNPQTPKTPTTPLPQTPTRRTELYAVIDIERTA 480
           NFDIRRPSLEHRQLNYIQVDLEGGSDSDNPQTPKTPTTPLPQTPTRRTELYAVIDIERTA
Sbjct: 421 NFDIRRPSLEHRQLNYIQVDLEGGSDSDNPQTPKTPTTPLPQTPTRRTELYAVIDIERTA 480

Query: 481 AMSNLQKALPRDDGTSRKTRHNSTDLPM 508
           AMSNLQKALPRDDGTSRKTRHNSTDLPM
Sbjct: 481 AMSNLQKALPRDDGTSRKTRHNSTDLPM 508


>gi|5730059 fibroblast growth factor receptor substrate 3 [Homo
           sapiens]
          Length = 492

 Score =  441 bits (1133), Expect = e-123
 Identities = 249/522 (47%), Positives = 327/522 (62%), Gaps = 44/522 (8%)

Query: 1   MGSCCSCPDKDTVPDNHRNKFKVINVDDDGNELGSGIMELTDTELILYTRKRDSVKWHYL 60
           MGSCCSC ++D+VPDNH  KFKV NVDD+G ELGSG+MELT +EL+L+  +R++V+W YL
Sbjct: 1   MGSCCSCLNRDSVPDNHPTKFKVTNVDDEGVELGSGVMELTQSELVLHLHRREAVRWPYL 60

Query: 61  CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSINVVEEPV-VE 119
           CLRRYGYDSNLFSFESGRRCQTGQGIFAFKC+RAEE+FN+LQ++MQ NSINV+EEPV + 
Sbjct: 61  CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEPVIIT 120

Query: 120 RNNHQTELEVPRTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVG 179
           RN+H  EL++PR P+ P   G+   +  NG P     G+     + R  S  S R PS+G
Sbjct: 121 RNSHPAELDLPRAPQPPNALGYTVSSFSNGCP-----GEGPRFSAPRRLSTSSLRHPSLG 175

Query: 180 EESTHPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSNAESSTP-KEEPSSIEDR 238
           EESTH L+  +EQ HTYVNT   +++ +       PL       E   P   +    + R
Sbjct: 176 EESTHALIAPDEQSHTYVNTPASEDDHRRGRHCLQPL------PEGQAPFLPQARGPDQR 229

Query: 239 DPQILLEPEGVKFVLGPTPVQKQLMEKEKLEQLGRDQVSGSGANNTEWDTGYDSDERRDA 298
           DPQ+ L+P  VKFVLGPTP ++ +++ + L     D    +  NN E  +        + 
Sbjct: 230 DPQVFLQPGQVKFVLGPTPARRHMVKCQGLCPSLHDPPHHN--NNNEAPS--------EC 279

Query: 299 PSVNKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNINNSAQRRTALLNYENLPSLPPV 358
           P+  K  YEN+ G       G+ RG     S  +    N  A RR ALL+YENLP LPPV
Sbjct: 280 PAQPKCTYENVTG-------GLWRGAGWRLSPEE-PGWNGLAHRRAALLHYENLPPLPPV 331

Query: 359 WEARKL-----SRDEDDNLGPKTPSLNGYHNNLD---PMHNYVNTENVTVPASAHKIEYS 410
           WE++       + D+ D+    TPS NG+ +  +   P+    +T        +  +  +
Sbjct: 332 WESQAQQLGGEAGDDGDSRDGLTPSSNGFPDGEEDETPLQKPTSTRAAIRSHGSFPVPLT 391

Query: 411 RRRDCTPTVFNFDIRRPSLE-HRQLNYIQVDLE--GGSDSDNPQTPKTPTTPLPQT-PTR 466
           RRR  +P VFNFD RRP  E  RQLNYIQV+L+  GG     PQ P +P  P+P T P R
Sbjct: 392 RRRG-SPRVFNFDFRRPGPEPPRQLNYIQVELKGWGGDRPKGPQNPSSPQAPMPTTHPAR 450

Query: 467 RTELYAVIDIERTAAMSNLQKALPRDDGTSRKTRHNSTDLPM 508
            ++ YAVID+++T AMSNLQ+ALPRDDGT+RKTRHNSTDLP+
Sbjct: 451 SSDSYAVIDLKKTVAMSNLQRALPRDDGTARKTRHNSTDLPL 492


>gi|4503357 docking protein 1 [Homo sapiens]
          Length = 481

 Score = 59.7 bits (143), Expect = 6e-09
 Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 41/235 (17%)

Query: 34  GSGIMELTDTELILYTRKRDS------VKWHYLCLRRYGYDSNLFSFESGRRCQTGQGIF 87
           GS ++ +    L L T    S      + W Y  LRRYG D  +FSFE+GRRC +G G F
Sbjct: 172 GSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTF 231

Query: 88  AFKCARAEELFNMLQEIMQNNSINVVE---EPVVERNNHQTELEVPRTPRTPTTPGFAAQ 144
            F+ A+  ++F  ++  +              V+  ++H+ E+   + P +P  P     
Sbjct: 232 TFQTAQGNDIFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLP-SPPGPQELLD 290

Query: 145 NLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVGEESTHPLLVAEEQVHTYVNTTGVQE 204
           + P  Y             +    S+  A  PS     + PL     Q        GVQ 
Sbjct: 291 SPPALY-------------AEPLDSLRIAPCPSQDSLYSDPLDSTSAQA-----GEGVQR 332

Query: 205 ERKNRTSVHVPLEARVSNAESSTPKEEPSSIEDRDPQILLEPEGVKFVLGPTPVQ 259
           ++     ++   + ++  A+ + PKE+P         I  EPEG    L P P Q
Sbjct: 333 KKPLYWDLYEHAQQQLLKAKLTDPKEDP---------IYDEPEG----LAPVPPQ 374


>gi|47575849 docking protein 6 [Homo sapiens]
          Length = 331

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 48/169 (28%), Positives = 69/169 (40%), Gaps = 22/169 (13%)

Query: 34  GSGIMELTDTELILYTRKRDSVK---WHYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFK 90
           G   M++T   + L+      VK   W    LRRYG DS  F+FESGR C TG+G+F F+
Sbjct: 153 GECTMQITHENIYLWDIHNAKVKLVMWPLSSLRRYGRDSTWFTFESGRMCDTGEGLFTFQ 212

Query: 91  CARAEELFNMLQEIMQNNSINVVEE------PVVERNNHQTELEVPRT-------PRTPT 137
               E    M+ + + + ++ + E+       + ++   QT L  P T       PR+  
Sbjct: 213 TREGE----MIYQKVHSATLAIAEQHERLMLEMEQKARLQTSLTEPMTLSKSISLPRSAY 268

Query: 138 TPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVGEESTHPL 186
                 QN           G  SS  S        A  P   EE+  PL
Sbjct: 269 WHHITRQNSVGEIYSLQGHGFGSSKMSRAQTFPSYA--PEQSEEAQQPL 315


>gi|41406050 docking protein 2 [Homo sapiens]
          Length = 412

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)

Query: 57  WHYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIM--QNNSINVVE 114
           W Y  LRR+G D   FSFE+GRRC +G+G F F+  +  E+F  L+E +  Q N+     
Sbjct: 194 WPYRFLRRFGRDKVTFSFEAGRRCVSGEGNFEFETRQGNEIFLALEEAISAQKNAAPATP 253

Query: 115 EP 116
           +P
Sbjct: 254 QP 255


>gi|221554537 docking protein 3 isoform 1 [Homo sapiens]
          Length = 496

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 55/232 (23%), Positives = 82/232 (35%), Gaps = 32/232 (13%)

Query: 57  WHYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSINVVEEP 116
           W Y  LR++G D  +FSFE+GRRC +G+G+FAF    A +L               V   
Sbjct: 259 WPYHFLRKFGSDKGVFSFEAGRRCHSGEGLFAFSTPCAPDL------------CRAVAGA 306

Query: 117 VVERNNHQTELEVPRTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLP 176
           +  +     EL  P+    P      + + P      P        P    P+     L 
Sbjct: 307 IARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMP--------PGPEPPTSRKMHLA 358

Query: 177 SVGEESTHPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSNAESS--------TP 228
             G +S  PLL+  E             +R +    +  L   +   E+S         P
Sbjct: 359 EPGPQSL-PLLLGPEPNDLASGLYASVCKRASGPPGNEHLYENLCVLEASPTLHGGEPEP 417

Query: 229 KEEPSSIEDRDPQILLEPEGVKFVLGPTPVQKQLMEKEKLEQLGRDQVSGSG 280
            E P S       I    + + +   P P     +E +    L  DQV G+G
Sbjct: 418 HEGPGSRSPTTSPIYHNGQDLSW---PGPANDSTLEAQYRRLLELDQVEGTG 466


>gi|29544726 docking protein 5 [Homo sapiens]
          Length = 306

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)

Query: 34  GSGIMELTDTELILYTRKRDSVK---WHYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFK 90
           G   +++T   + L+  +   VK   W    LRRYG D+  F+FE+GR C+TG+G+F F+
Sbjct: 153 GECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTTWFTFEAGRMCETGEGLFIFQ 212

Query: 91  CARAEELF 98
               E ++
Sbjct: 213 TRDGEAIY 220


>gi|20070302 docking protein 4 [Homo sapiens]
          Length = 326

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 55  VKWHYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIM-----QNNS 109
           V W    LRRYG D+  F+FE+GR C  G+G++ F+    E+++  +         Q+  
Sbjct: 177 VSWPLCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKR 236

Query: 110 INVVEEPVVERNNHQTE-LEVPRTPRT 135
           + +  E  V   N  TE    P TP T
Sbjct: 237 VLLEMEKNVRLLNKGTEHYSYPCTPTT 263


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 35.8 bits (81), Expect = 0.095
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 6/53 (11%)

Query: 447   SDNPQTPKTPTTPLPQTPTRRTELYAVIDIERTAAMSNLQKALPRDDGTSRKT 499
             S+ P TPKTP  P P+ P+   E   V+D+ +++   +L  + P+DDG SR T
Sbjct: 30316 SEEPVTPKTPLNP-PEPPSNPPE---VLDVTKSSV--SLSWSRPKDDGGSRVT 30362


>gi|110349717 titin isoform novex-2 [Homo sapiens]
          Length = 27118

 Score = 35.8 bits (81), Expect = 0.095
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 6/53 (11%)

Query: 447   SDNPQTPKTPTTPLPQTPTRRTELYAVIDIERTAAMSNLQKALPRDDGTSRKT 499
             S+ P TPKTP  P P+ P+   E   V+D+ +++   +L  + P+DDG SR T
Sbjct: 24011 SEEPVTPKTPLNP-PEPPSNPPE---VLDVTKSSV--SLSWSRPKDDGGSRVT 24057


>gi|110349713 titin isoform novex-1 [Homo sapiens]
          Length = 27051

 Score = 35.8 bits (81), Expect = 0.095
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 6/53 (11%)

Query: 447   SDNPQTPKTPTTPLPQTPTRRTELYAVIDIERTAAMSNLQKALPRDDGTSRKT 499
             S+ P TPKTP  P P+ P+   E   V+D+ +++   +L  + P+DDG SR T
Sbjct: 23944 SEEPVTPKTPLNP-PEPPSNPPE---VLDVTKSSV--SLSWSRPKDDGGSRVT 23990


>gi|110349715 titin isoform N2-B [Homo sapiens]
          Length = 26926

 Score = 35.8 bits (81), Expect = 0.095
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 6/53 (11%)

Query: 447   SDNPQTPKTPTTPLPQTPTRRTELYAVIDIERTAAMSNLQKALPRDDGTSRKT 499
             S+ P TPKTP  P P+ P+   E   V+D+ +++   +L  + P+DDG SR T
Sbjct: 23819 SEEPVTPKTPLNP-PEPPSNPPE---VLDVTKSSV--SLSWSRPKDDGGSRVT 23865


>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis
           critical region 1 [Homo sapiens]
          Length = 1400

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 87/386 (22%), Positives = 126/386 (32%), Gaps = 54/386 (13%)

Query: 119 ERNNHQTELEVPRTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSV 178
           E   H        T  +P  P    +  P    +  S    S+    R P       PS 
Sbjct: 441 EPTEHGERTANENTTPSPAEPTEHGERTPFANDKTTSSSAESTEHGERTPLANENTTPSP 500

Query: 179 GEESTHPLLVAEEQVHTYVNTTGVQEER------KNRTSVHVPLEARVSNA-ESSTPKE- 230
            E + +    A E  +T  +  G  E R      K   S   P E R + A E +TP   
Sbjct: 501 AEPTENRERTANE--NTTPSPAGPTENRETTANEKTTLSPVEPTENRETTANEKTTPSPA 558

Query: 231 EPSSIEDRDP-------QILLEP--EGVKFVLG-----PTPVQKQLMEKEKLEQLGRDQV 276
           EP+    R P           EP   G +  L      P+P +      E  E+   ++ 
Sbjct: 559 EPTENGQRTPFANEKTTSSSAEPTEHGERTPLANENTTPSPAEPT----ENRERTANEKT 614

Query: 277 SGSGANNTEWDTGYDSDERRDAPSVNKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNI 336
           + S A  TE          +  PS   L     NG   P A+     + TS+S   T++ 
Sbjct: 615 TPSPAEPTENGDRTPLANEKTTPS---LAEPTENGQRTPFANE----KTTSSSAEPTEH- 666

Query: 337 NNSAQRRTALLNYENLPSLPPVWEARKLSRDEDDNLGPKTPSLNGYHNN--------LDP 388
               + RT L N    PS     E R+ + +E+    P  P+ N              +P
Sbjct: 667 ----EERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENREMTANEKTTLFPAEP 722

Query: 389 MHNYVNTENV-TVPASAHKIEYSRRRDCTPTVFNFDIRRPSLEHRQLNYIQVD----LEG 443
             N   T N  T  + A   E  +R              P+ EH +   +  +       
Sbjct: 723 TENRERTANEKTTSSPAEPTENGQRTPFANEKTTSSSAEPT-EHGERTPLANENTTLSPA 781

Query: 444 GSDSDNPQTPKTPTTPLPQTPTRRTE 469
           G   +  +T    TTP P  PT   E
Sbjct: 782 GPTENRERTANEKTTPFPAEPTENRE 807



 Score = 30.0 bits (66), Expect = 5.2
 Identities = 71/352 (20%), Positives = 121/352 (34%), Gaps = 55/352 (15%)

Query: 177 SVGEESTHPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSNAESSTPKEEPSSIE 236
           S+ E + H    A E      NT    E  +NR         R +N  ++    EP+   
Sbjct: 343 SLAEPTEHGGRTANEN-----NTPSPAEPTENRE--------RTANENTTLSPAEPTENR 389

Query: 237 DRDPQILLEPEGVKFVLGPTPVQKQLMEK----------EKLEQLGRDQVSGSGANNTEW 286
           +R       P    F  GPT  ++    +          E  E+   +  + S A  TE 
Sbjct: 390 ERTANENTAP----FPAGPTENREMTANENTTLFPAEPTEHGERTANENTTPSPAEPTEH 445

Query: 287 DTGYDSDERRDAPSVNKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNINNSAQRRTAL 346
                ++    +P+         +G   P A+     + TS+S   T++       RT L
Sbjct: 446 GERTANENTTPSPAE-----PTEHGERTPFAND----KTTSSSAESTEH-----GERTPL 491

Query: 347 LNYENLPSLPPVWEARKLSRDEDDNLGPKTPSLN-----GYHNNLDPMHNYVNTENV--- 398
            N    PS     E R+ + +E+    P  P+ N          L P+    N E     
Sbjct: 492 ANENTTPSPAEPTENRERTANENTTPSPAGPTENRETTANEKTTLSPVEPTENRETTANE 551

Query: 399 -TVPASAHKIEYSRRRDCTPTVFNFDIRRPSLEHRQLNYIQVDLEGGSDSD----NPQTP 453
            T P+ A   E  +R              P+ EH +   +  +    S ++      +T 
Sbjct: 552 KTTPSPAEPTENGQRTPFANEKTTSSSAEPT-EHGERTPLANENTTPSPAEPTENRERTA 610

Query: 454 KTPTTPLPQTPTRRTELYAVIDIERTAAMSNLQKALPRDDGTSRKTRHNSTD 505
              TTP P  PT   +   + + + T +++   +   R    + KT  +S +
Sbjct: 611 NEKTTPSPAEPTENGDRTPLANEKTTPSLAEPTENGQRTPFANEKTTSSSAE 662


>gi|111185957 downstream of tyrosine kinase 7 [Homo sapiens]
          Length = 504

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 32  ELGSGIMELTDTELILYTRKRDSV--KWHYLCLRRYGYDSNLFSFESGRRCQTGQGIFAF 89
           E G   + L +  L+L      +V  +W    LRRYG   + F FE G RC    G+F  
Sbjct: 125 ESGPATLHLCNDVLVLARDIPPAVTGQWKLSDLRRYGAVPSGFIFEGGTRCGYWAGVFFL 184

Query: 90  KCARAEEL 97
             A  E++
Sbjct: 185 SSAEGEQI 192


>gi|7662230 ring finger protein 40 [Homo sapiens]
          Length = 1001

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 54/212 (25%), Positives = 80/212 (37%), Gaps = 44/212 (20%)

Query: 92  ARAEELFNMLQ-EIMQNNSINVVEEPV----------VERNNHQTELEVPRTPRTPTTPG 140
           A+  + + ML+ E  QN + N    P+          ++ +NHQ + +  R  R      
Sbjct: 453 AQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISSLQNHNHQLKGDAQRYKRK----- 507

Query: 141 FAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVGEESTHPLLVAEEQVH------ 194
                   G  R  + G A S P+  HP       P+ G+E   P  V+           
Sbjct: 508 LREVQAEIGKLRAQASGSAHSTPNLGHPEDSGVSAPAPGKEEGGPGPVSTPDNRKEMAPV 567

Query: 195 --TYVNTTGVQEERKNRTSVHVPLEARVSNAESSTPKEEPSSIEDRDPQI-----LLEPE 247
             T   TT V++E        VP E    + +  TP  +  S   R+P+      L E E
Sbjct: 568 PGTTTTTTSVKKEEL------VPSE---EDFQGITPGAQGPSSRGREPEARPKRELRERE 618

Query: 248 GVKFVLGPTPVQKQL----MEKEKLEQLGRDQ 275
           G    LGP PV   L     EK K+E+  R +
Sbjct: 619 GPS--LGPPPVASALSRADREKAKVEETKRKE 648


>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
          Length = 1334

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 17/107 (15%)

Query: 95  EELFNMLQEIMQNNSINVVEEPVVERNNHQTELEVPRTPRTPTTPGF-----AAQNLPNG 149
           E + ++ +   +  S      P+      Q  LEVP+ P    +PG        ++ P G
Sbjct: 557 ENILDLSRSTFRGPSPEPPPSPLQVPTYPQLTLEVPQAPEVLRSPGVPPSPCLPESYPYG 616

Query: 150 YPRYPSF---GDASSHP-------SSRHPSVGSARLPSVGEESTHPL 186
            P+  S    G  S HP       SS+ PS GS R P  G+  + PL
Sbjct: 617 SPQEKSLDKAGSESPHPGRRTPGNSSKKPSQGSGRRP--GDPGSTPL 661


>gi|44771211 mediator complex subunit 13-like [Homo sapiens]
          Length = 2210

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 12/105 (11%)

Query: 107  NNSINVVEEPVVERNNHQTELEVPRTPRTPTTPGFAAQNLPNGYPRYPSF--GDASSHPS 164
            N+   V+  P   R +  T    PRTPRTP TP         G  +Y S   G  +S PS
Sbjct: 1032 NSGAGVLPSPATPRFSVPT----PRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPASTPS 1087

Query: 165  SRHPSVGSARLPSVGEESTHPLLVAEEQVHTYVNTTGVQEERKNR 209
            +  P      L SV   +  P+  A     T + +  V    K+R
Sbjct: 1088 TTRP------LNSVEPATMQPIPEAHSLYVTLILSDSVMNIFKDR 1126


>gi|122692281 hypothetical protein LOC645369 [Homo sapiens]
          Length = 621

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 39/159 (24%), Positives = 56/159 (35%), Gaps = 30/159 (18%)

Query: 126 ELEVPRTPRTPTTPGFA---AQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVGEES 182
           +   P +P  P +PG A   +  L       P      S P+ R      +  PS   + 
Sbjct: 477 DYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKG 536

Query: 183 THPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSNAESSTPK---EEPSSIEDRD 239
             PL  A     + ++    Q     R S    + A V  AE S+P+   +EP + E   
Sbjct: 537 YTPLREAGTSTESVLDAVAGQ----TRDSA---VAAPVLGAEQSSPEGASQEPPTAEQ-- 587

Query: 240 PQILLEPEGVKFVLGPTPVQKQLMEKEKLEQLGRDQVSG 278
                          P PVQ+Q   KEKL  + R    G
Sbjct: 588 ---------------PQPVQRQFTNKEKLIMISRSHAIG 611


>gi|61102725 la related protein isoform 2 [Homo sapiens]
          Length = 1096

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 9/55 (16%)

Query: 449 NPQTPKTPTTPLPQTPTRRTELYAVIDIERTAAMSNLQKALPRDDGTSRKTRHNS 503
           N +TP+TP TP  +  ++ +  Y V+   RT     L   +PR     RKTRH+S
Sbjct: 779 NTRTPRTPRTPQLKDSSQTSRFYPVVKEGRT-----LDAKMPR----KRKTRHSS 824


>gi|39725634 la related protein isoform 1 [Homo sapiens]
          Length = 1019

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 9/55 (16%)

Query: 449 NPQTPKTPTTPLPQTPTRRTELYAVIDIERTAAMSNLQKALPRDDGTSRKTRHNS 503
           N +TP+TP TP  +  ++ +  Y V+   RT     L   +PR     RKTRH+S
Sbjct: 702 NTRTPRTPRTPQLKDSSQTSRFYPVVKEGRT-----LDAKMPR----KRKTRHSS 747


>gi|50658061 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
           [Homo sapiens]
          Length = 1168

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 9/152 (5%)

Query: 125 TELEVPRTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLP---SVGEE 181
           +E  +P  P  P +P  A +   N    +P        P+   P V   +L    SV  E
Sbjct: 573 SESHLPEEP-APLSPQQAFRRRANTLSHFPIECQEPPQPARGSPGVSQRKLMRYHSVSTE 631

Query: 182 STHPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSN----AESSTPKEEPSSIED 237
           + H     E + + ++  +G    +  R S    +  RV+      +SS+  E+ S + +
Sbjct: 632 TPHERKDFESKAN-HLGDSGGTPVKTRRHSWRQQIFLRVATPQKACDSSSRYEDYSELGE 690

Query: 238 RDPQILLEPEGVKFVLGPTPVQKQLMEKEKLE 269
             P+  LEP       GP P +K+   +E  E
Sbjct: 691 LPPRSPLEPVCEDGPFGPPPEEKKRTSRELRE 722


>gi|208431824 forkhead box I3 [Homo sapiens]
          Length = 420

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 163 PSSRHPSVGSARLPSVGEESTHPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSN 222
           P SRH  +  A+LPS G  S  P  ++E    T   +         R+S + P  A  S 
Sbjct: 335 PGSRHLGIQGAQLPSSGVFS--PTSISEASADTLQLSNSTSNSTGQRSSYYSPFPASTSG 392

Query: 223 AESS 226
            +SS
Sbjct: 393 GQSS 396


>gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]
          Length = 400

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 8/150 (5%)

Query: 253 LGPTPVQKQLMEKEKLEQLGRDQVSGSGANNTEWDTGYDSDERRDAPSVNKLVYENIN-G 311
           + P P   +  +K+ L  L R + SG+       D    SD    A    K++   ++ G
Sbjct: 160 VAPLPTIYKRQKKQDLTLLPRLECSGTNTTYCSLDLPSSSDPPILASQNTKIIDSELSDG 219

Query: 312 LSIPSASGVRRGRLTSTSTSDTQNINNSAQRRTALLNYENLPSLPPVWEARK------LS 365
           +++  A   R   + +      Q I ++++R+  LLN +   SL  V E RK      L+
Sbjct: 220 IAMLVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLN-QRFESLCAVLEERKGELLQALA 278

Query: 366 RDEDDNLGPKTPSLNGYHNNLDPMHNYVNT 395
           R++++ L      +  Y ++L+     V +
Sbjct: 279 REQEEKLQRVRGLIRQYGDHLEASSKLVES 308


>gi|238624188 diffuse panbronchiolitis critical region 1 protein
           [Homo sapiens]
          Length = 1393

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 73/374 (19%), Positives = 126/374 (33%), Gaps = 43/374 (11%)

Query: 158 DASSHPSSRHPSVGSARLPSVGEESTHPLLVAEEQVHTYVNTT---GVQEERKNRTSVHV 214
           + S        +V S +L +   ++    + A E   +    T   G      N  S   
Sbjct: 244 EESEKTEDSRTTVASDKLLTKTTKNIQETISANELTQSLAEPTEHGGRTANENNTPSPAE 303

Query: 215 PLEARVSNAESSTPKEEPSSIEDRDPQILLEPEGVKFVLGPTPVQKQLMEK--------- 265
           P E R   A  +T       IE+R+           F  GPT  ++    +         
Sbjct: 304 PTENRERTANENTTLSPAEPIENRERTA--NENTAPFPAGPTENREMTANENTTLFPAEP 361

Query: 266 -EKLEQLGRDQVSGSGANNTEWDTGYDSDERRDAPSVNKLVYENINGLSIPSASGVRRGR 324
            E  E+   +  + S A  TE      ++    +P+         +G   P A+     +
Sbjct: 362 TEHGERTANENTTPSPAEPTEHGERTANENTTPSPAE-----PTEHGERTPFAND----K 412

Query: 325 LTSTSTSDTQNINNSAQRRTALLNYENLPSLPPVWEARKLSRDEDDNLGPKTPSLN---- 380
            TS+S   T++       RT L N    PS     E R+ + +E+    P  P+ N    
Sbjct: 413 TTSSSAESTEH-----GERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENRETT 467

Query: 381 -GYHNNLDPMHNYVNTENV----TVPASAHKIEYSRRRDCTPTVFNFDIRRPSLEHRQLN 435
                 L P+    N E      T P+ A   E  +R              P+ EH +  
Sbjct: 468 ANEKTTLSPVEPTENRETTANEKTTPSPAEPTENGQRTPFANEKTTSSSAEPT-EHGERT 526

Query: 436 YIQVDLEGGSDSD----NPQTPKTPTTPLPQTPTRRTELYAVIDIERTAAMSNLQKALPR 491
            +  +    S ++      +T    TTP P  PT   +   + + + T +++   +   R
Sbjct: 527 PLANENTTPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEKTTPSLAEPTENGQR 586

Query: 492 DDGTSRKTRHNSTD 505
               + KT  +S +
Sbjct: 587 TPFANEKTTSSSAE 600


>gi|30061567 La ribonucleoprotein domain family member 2 isoform 1
           [Homo sapiens]
          Length = 914

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 10/58 (17%)

Query: 451 QTPKTPTTPLPQTPTRRTELYAVIDIERTAAMSNLQKALPRDDGTSRKTRHNSTDLPM 508
           +TPKTP TP  Q P +    Y V+            KA+       RKTRH ST+ P+
Sbjct: 600 RTPKTPRTPRLQDPNKTPRFYPVV---------KEPKAIDVKSPRKRKTRH-STNPPL 647


>gi|10863935 reticulon 1 isoform A [Homo sapiens]
          Length = 776

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 33/152 (21%), Positives = 59/152 (38%), Gaps = 23/152 (15%)

Query: 119 ERNNHQTELEVPRTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSV 178
           + N H T   +  +P    TPG          P  P         S     +  A    V
Sbjct: 129 KENGHVT---ISESPEELGTPG-------PSLPDVPGIESRGLFSSDSGIEMTPAESTEV 178

Query: 179 GEESTHPLLVAEEQVHTYVNTTGVQEERKNRTSVHVPLEARVSNAESSTPKEEPSSIEDR 238
            +    PL   + + + Y++ T   EE K++   H  LE            ++    +++
Sbjct: 179 NKILADPLDQMKAEAYKYIDITR-PEEVKHQEQHHPELE------------DKDLDFKNK 225

Query: 239 DPQILLEPEGVKFVLGPTPVQKQLMEKEKLEQ 270
           D  I ++PEGV+    P PV+ ++++   LE+
Sbjct: 226 DTDISIKPEGVREPDKPAPVEGKIIKDHLLEE 257


>gi|5031805 insulin receptor substrate 1 [Homo sapiens]
          Length = 1242

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 22/87 (25%)

Query: 62  LRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSINVVEEPVVERN 121
           +RR G+  N F  E GR   TG G F  +                      V++ VV +N
Sbjct: 211 IRRCGHSENFFFIEVGRSAVTGPGEFWMQ----------------------VDDSVVAQN 248

Query: 122 NHQTELEVPRTPRTPTTPGFAAQNLPN 148
            H+T LE  R       P   +Q+  N
Sbjct: 249 MHETILEAMRAMSDEFRPRSKSQSSSN 275


>gi|148612879 polyhomeotic like 3 [Homo sapiens]
          Length = 995

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 39/161 (24%), Positives = 61/161 (37%), Gaps = 36/161 (22%)

Query: 113 VEEPVVERNNHQTELEVP-------RTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSS 165
           V+ PVV +     E E+P       R  RTP  P  +   +  G              +S
Sbjct: 592 VDPPVVYQVEDVCEEEMPEESDECVRMDRTPPPPTLSPAAITVG---------RGEDLTS 642

Query: 166 RHPSVGSARLPSVGEESTHPLLVAEEQVHTYVNTTGV----QEERKNRTSVHVPLEARVS 221
            HP +    LP+V   S   +    +  H  V    +       R N TS+H        
Sbjct: 643 EHPLLEQVELPAVASVSASVIKSPSDPSHVSVPPPPLLLPAATTRSNSTSMH-------- 694

Query: 222 NAESSTPKEEPSSIEDRDPQILLEPEGVKFVLGPTPVQKQL 262
              SS P     SIE++ PQ +++P+ +  V+    +Q+ L
Sbjct: 695 ---SSIP-----SIENKPPQAIVKPQILTHVIEGFVIQEGL 727


>gi|239755199 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 279

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 34/138 (24%), Positives = 52/138 (37%), Gaps = 7/138 (5%)

Query: 109 SINVVEEPVVERNNHQTELEVPRTPRTPTT-PGFAAQNLPNGYPRYPSFGDASSHPSSRH 167
           SI+    P V  + H +       P  P+  P       P+ +P    F   S HP + H
Sbjct: 90  SIHPSIHPPVHLSTHPSTHPSIHPPIHPSIYPSIHLSTHPSIHPPIHPFIHPSIHPPT-H 148

Query: 168 PSVGSARLPSVGEESTHPLLVAEEQVHTYVN-TTGVQEERKNRTSVHVPLEARV--SNAE 224
           PS+ ++  P +   STHP        H  ++ T   +       S+H P    +  S   
Sbjct: 149 PSIHASTHPLIHHPSTHP--PTHPSTHPSIHPTIHPRAHPPIHPSIHSPTHPSIHPSTHP 206

Query: 225 SSTPKEEPSSIEDRDPQI 242
           S+ P   PS+     P I
Sbjct: 207 STHPLTHPSTYPSIHPTI 224


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.130    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,066,012
Number of Sequences: 37866
Number of extensions: 1150231
Number of successful extensions: 3935
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 3780
Number of HSP's gapped (non-prelim): 214
length of query: 508
length of database: 18,247,518
effective HSP length: 107
effective length of query: 401
effective length of database: 14,195,856
effective search space: 5692538256
effective search space used: 5692538256
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.