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Search of human proteins with 149944486
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149944486 hypothetical protein LOC389643 [Homo sapiens]
(796 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149944486 hypothetical protein LOC389643 [Homo sapiens] 1568 0.0
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 39 0.015
gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens] 38 0.042
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 35 0.21
gi|171184451 centrosome-associated protein 350 [Homo sapiens] 35 0.27
gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens] 35 0.27
gi|83716024 kinesin family member 21B [Homo sapiens] 35 0.36
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 34 0.47
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m... 34 0.47
gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens] 34 0.47
gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens] 34 0.47
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 34 0.61
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 34 0.61
gi|51317384 GLE1 RNA export mediator homolog isoform 1 [Homo sap... 33 0.80
gi|4557627 GLE1 RNA export mediator homolog isoform 2 [Homo sapi... 33 0.80
gi|122937416 hypothetical protein LOC85452 [Homo sapiens] 33 1.4
gi|198442878 tripartite motif-containing 17 isoform 3 [Homo sapi... 33 1.4
gi|68160935 tripartite motif-containing 17 isoform 2 [Homo sapiens] 33 1.4
gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens] 33 1.4
gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens] 33 1.4
gi|12711674 UPF3 regulator of nonsense transcripts homolog B iso... 33 1.4
gi|187608585 CASP8 and FADD-like apoptosis regulator isoform 2 [... 32 1.8
gi|187608577 CASP8 and FADD-like apoptosis regulator isoform 1 [... 32 1.8
gi|187608571 CASP8 and FADD-like apoptosis regulator isoform 1 [... 32 1.8
gi|7661636 SYF2 homolog, RNA splicing factor isoform 1 [Homo sap... 32 1.8
gi|27734911 DAZ interacting protein 1-like [Homo sapiens] 32 1.8
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 32 2.3
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 32 2.3
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 32 2.3
gi|34878777 ring finger protein 20 [Homo sapiens] 32 2.3
>gi|149944486 hypothetical protein LOC389643 [Homo sapiens]
Length = 796
Score = 1568 bits (4061), Expect = 0.0
Identities = 796/796 (100%), Positives = 796/796 (100%)
Query: 1 MAETKDVFGQEPHPVEDDLYKERTRKRRKSDRDQRFRAFPSMEQSALKEYEKLESRTRRV 60
MAETKDVFGQEPHPVEDDLYKERTRKRRKSDRDQRFRAFPSMEQSALKEYEKLESRTRRV
Sbjct: 1 MAETKDVFGQEPHPVEDDLYKERTRKRRKSDRDQRFRAFPSMEQSALKEYEKLESRTRRV 60
Query: 61 LSNTYQKLIQSVFLDDSIPNGVKYLINRLLALIEKPTVDPIYIALFGSTGAGKSSLINAI 120
LSNTYQKLIQSVFLDDSIPNGVKYLINRLLALIEKPTVDPIYIALFGSTGAGKSSLINAI
Sbjct: 61 LSNTYQKLIQSVFLDDSIPNGVKYLINRLLALIEKPTVDPIYIALFGSTGAGKSSLINAI 120
Query: 121 IQQAMFLPVSGESICTSCIVQVSSGCCVQYEAKIHLLSDQEWREELKNLTKLLHRTEELS 180
IQQAMFLPVSGESICTSCIVQVSSGCCVQYEAKIHLLSDQEWREELKNLTKLLHRTEELS
Sbjct: 121 IQQAMFLPVSGESICTSCIVQVSSGCCVQYEAKIHLLSDQEWREELKNLTKLLHRTEELS 180
Query: 181 REEADAWNRDEAVEEATWKLQMIYGNGAESKNYEELLRAKPKRKIPTSRVITLKAEEAEE 240
REEADAWNRDEAVEEATWKLQMIYGNGAESKNYEELLRAKPKRKIPTSRVITLKAEEAEE
Sbjct: 181 REEADAWNRDEAVEEATWKLQMIYGNGAESKNYEELLRAKPKRKIPTSRVITLKAEEAEE 240
Query: 241 LSIKLDPYIRTQRRDWDGEAAEMRIWPLIKHVEVTLPKSDLIPEGVVLVDIPGTGDFNSK 300
LSIKLDPYIRTQRRDWDGEAAEMRIWPLIKHVEVTLPKSDLIPEGVVLVDIPGTGDFNSK
Sbjct: 241 LSIKLDPYIRTQRRDWDGEAAEMRIWPLIKHVEVTLPKSDLIPEGVVLVDIPGTGDFNSK 300
Query: 301 RDEMWKKTIDKCSVIWVISDIERVSGGQAHEDLLNESIKACQRGFCRDVALVVTKMDKLH 360
RDEMWKKTIDKCSVIWVISDIERVSGGQAHEDLLNESIKACQRGFCRDVALVVTKMDKLH
Sbjct: 301 RDEMWKKTIDKCSVIWVISDIERVSGGQAHEDLLNESIKACQRGFCRDVALVVTKMDKLH 360
Query: 361 LPEYLRERKAGNQAIQSQREAVLERNEMIKLQRTRILKEKLKRKLPADFKVLEASDLVYT 420
LPEYLRERKAGNQAIQSQREAVLERNEMIKLQRTRILKEKLKRKLPADFKVLEASDLVYT
Sbjct: 361 LPEYLRERKAGNQAIQSQREAVLERNEMIKLQRTRILKEKLKRKLPADFKVLEASDLVYT 420
Query: 421 VSAQEYWQQALLTEEETEIPKLREYIRKSLLDKKKRTVTKYVTEAFGLLLLTDSFNSTQN 480
VSAQEYWQQALLTEEETEIPKLREYIRKSLLDKKKRTVTKYVTEAFGLLLLTDSFNSTQN
Sbjct: 421 VSAQEYWQQALLTEEETEIPKLREYIRKSLLDKKKRTVTKYVTEAFGLLLLTDSFNSTQN 480
Query: 481 LPNEHLHMSVLRRFAEEKVELLEKAIAQCFACMEQPLQEGVRTARTSYRCILRACLVRSK 540
LPNEHLHMSVLRRFAEEKVELLEKAIAQCFACMEQPLQEGVRTARTSYRCILRACLVRSK
Sbjct: 481 LPNEHLHMSVLRRFAEEKVELLEKAIAQCFACMEQPLQEGVRTARTSYRCILRACLVRSK 540
Query: 541 GNQGFHQTLKAVCLKNGIYASRTLARIDLNEALTQPVYDQIDPVFGSIFRTGKPTGSALM 600
GNQGFHQTLKAVCLKNGIYASRTLARIDLNEALTQPVYDQIDPVFGSIFRTGKPTGSALM
Sbjct: 541 GNQGFHQTLKAVCLKNGIYASRTLARIDLNEALTQPVYDQIDPVFGSIFRTGKPTGSALM 600
Query: 601 PHIDAFKQSLQEKMTEIGIRSGWKYDSCKKNFLIQEISAILGGLEDHILRRKRRIYESLT 660
PHIDAFKQSLQEKMTEIGIRSGWKYDSCKKNFLIQEISAILGGLEDHILRRKRRIYESLT
Sbjct: 601 PHIDAFKQSLQEKMTEIGIRSGWKYDSCKKNFLIQEISAILGGLEDHILRRKRRIYESLT 660
Query: 661 ASVQSDLKLCYEEAAQITGKKACERMKDAIRRGVDRQVAEGMFERAQERMQHQFQQLKTG 720
ASVQSDLKLCYEEAAQITGKKACERMKDAIRRGVDRQVAEGMFERAQERMQHQFQQLKTG
Sbjct: 661 ASVQSDLKLCYEEAAQITGKKACERMKDAIRRGVDRQVAEGMFERAQERMQHQFQQLKTG 720
Query: 721 IVEKVKGSITTMLALASSQGDGLYKELADVGSEYKEMEKLHRSLREVAENARLRKGMQEF 780
IVEKVKGSITTMLALASSQGDGLYKELADVGSEYKEMEKLHRSLREVAENARLRKGMQEF
Sbjct: 721 IVEKVKGSITTMLALASSQGDGLYKELADVGSEYKEMEKLHRSLREVAENARLRKGMQEF 780
Query: 781 LLRASPSKAGPPGTSL 796
LLRASPSKAGPPGTSL
Sbjct: 781 LLRASPSKAGPPGTSL 796
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 39.3 bits (90), Expect = 0.015
Identities = 64/319 (20%), Positives = 126/319 (39%), Gaps = 50/319 (15%)
Query: 149 QYEAKIHLLSDQEWREELKNLTKLLHRTEELSREEADAWNRDEAVEEATWKLQMIYGNGA 208
+ E KI + WR+E K + R EE +E+ + W ++E + E + I+
Sbjct: 441 EQEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIHEQ----EEIWRQKE 496
Query: 209 ESKNYEELLRAKPK---RKIPTSRVITLKAEEAEELSIKLDPYIRTQRRDWDGEA---AE 262
+ EE +R + + R+ R K E EE + + IR Q W E +
Sbjct: 497 KMHEQEEKIRKQEEKVWRQEEKIREQEEKIREQEEKMWRQEEKIREQEEMWREEEKMHEQ 556
Query: 263 MRIWPLIKHVEVTLPKSDLIPEGVVLVDIPGTGDFNSKRDEMWK---KTIDKCSVIWVIS 319
+IW K E + D+MW+ K ++ +W
Sbjct: 557 EKIWEEEKRQE--------------------------QEDKMWRQEEKIREQEEKVWRQE 590
Query: 320 D--IERVSGGQAHEDLL---NESIKACQRGFCRDVALVVTKMDKLHLPEYL---RERKAG 371
+ E+ Q E+ + E I+ + + + +K+ E + +E K G
Sbjct: 591 EKIREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEKIREQEEKIREQEEMTQEQEEKMG 650
Query: 372 NQ--AIQSQREAVLERNEMIKLQRTRILKEKLKRKLPADFKVLEASDLVYTVSAQEYWQQ 429
Q + Q E + E+ E + Q +I +E+ K+ + K+ E +++ + + Q+
Sbjct: 651 EQEEKMCEQEEKMQEQEETMWRQEEKI-REQEKKIREQEEKIREQEEMMQEQEEKMWEQE 709
Query: 430 ALLTEEETEIPKLREYIRK 448
+ E+E ++ + E +R+
Sbjct: 710 EKMCEQEEKMQEQEEKMRR 728
Score = 32.3 bits (72), Expect = 1.8
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 160 QEWREELKNLTKLLHRTEELSREEADAWNRDEAV-----EEATWKLQMIYGNGAESKNYE 214
QEW E+++ + + EE RE+ + R E + E+ + +M++ + + E
Sbjct: 310 QEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQE 369
Query: 215 ELLRAKPKRKIPTSRVITLKAEEAEELSIKL 245
E++ K ++ ++ K E+ EL K+
Sbjct: 370 EMMWEKEEKMRRQEEMMWEKEEKIRELEEKM 400
>gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens]
Length = 841
Score = 37.7 bits (86), Expect = 0.042
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 641 LGGLEDHILRRKRRIYESLTASVQSD---LKLCYEE-AAQITGKKACERMKDAIRRGVDR 696
+ G + RR + ESL Q LK C E+ AA++ GK+ E ++D
Sbjct: 518 MDGAKGWFERRLKEAEESLQQQQQEQEEALKQCREQHAAELKGKE--EELQDV------- 568
Query: 697 QVAEGMFERAQERMQHQFQQLKTGIVEKVKGSITTMLALASSQGDGLYKELA-DVGSEYK 755
E+AQE + + + + ++VK ++ L +G K+L + E K
Sbjct: 569 ---RDQLEQAQEERDCHLKTISS-LKQEVKDTVDGQRIL-EKKGSAALKDLKRQLHLERK 623
Query: 756 EMEKLHRSLREVAENARLRKGMQEFLLRA--SPSK 788
+KL L+++ N++ R G++E +L SPS+
Sbjct: 624 RADKLQERLQDILTNSKSRSGLEELVLSEMNSPSR 658
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 35.4 bits (80), Expect = 0.21
Identities = 58/310 (18%), Positives = 126/310 (40%), Gaps = 42/310 (13%)
Query: 160 QEWREELKNLTKLLHRTEELSREEADAWNRDEAVEEATWKLQMIYGNGAESKNYEELLRA 219
QEW E+++ + + EE RE+ + R E +M++ + + EE++
Sbjct: 371 QEWEEKIQEQEEKIREQEEKIREQEEKMRRQE---------EMMWEKEEKMRRQEEMMWE 421
Query: 220 KPKRKIPTSRVITLKAEEAEELSIKL---------------DPYIRTQRRDWDGEAAEMR 264
K ++ ++ K E+ EL K+ + IR Q + + EA R
Sbjct: 422 KEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWR 481
Query: 265 IWPLIKHVEVTLPKSD----LIPEGVVLVDIPGTGDFNSKRDEMWK--KTIDKCSVIWVI 318
I+ E + + + E + + + +++EMW+ + I + IW
Sbjct: 482 QEEKIREQEEKIREQEEKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQ 541
Query: 319 SDIERVSGGQAHEDLLNESIKACQRGFCRDVALVVTKMDKLHLPEYLRERKAGNQAIQSQ 378
+ + HE E I+ + R + + +K+ E R+ + I+ Q
Sbjct: 542 KE-------KIHEQ--EEKIRKQEEKMWRQEEKMHDQEEKIREQEEKVWRQ--EEKIREQ 590
Query: 379 REAVLERNEMIKLQRTRILKEKLKRKLPADFKVLEASDLVYTVSAQEYWQQALLTEEETE 438
E + E+ E I+ ++ + +E+ ++ + K+ E + + + Q+ + E+E +
Sbjct: 591 EEKIREQEEKIR-EQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEEKMRRQEEKIREQEKK 649
Query: 439 IPKLREYIRK 448
I + E IR+
Sbjct: 650 IREQEEKIRE 659
Score = 30.0 bits (66), Expect = 8.8
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 QYEAKIHLLSDQEWREELKNLTKLLHRTEELSREEADAWNRDEAVEE 195
+ E KI ++ WR+E K + R EE +E+ + W ++E + E
Sbjct: 488 EQEEKIREQEEKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIRE 534
>gi|171184451 centrosome-associated protein 350 [Homo sapiens]
Length = 3117
Score = 35.0 bits (79), Expect = 0.27
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 318 ISDIERVSG---GQAHEDLLNESIKACQRGFCRDVALVVTKMDKLHLPEYLRERKAGNQA 374
+SD+ERV G Q L + IKA Q+ RD+AL+ + KA +A
Sbjct: 1346 LSDVERVRGISLAQQESVSLAQIIKAQQQRHERDLALL--------------KLKAEQEA 1391
Query: 375 IQSQREAVLERNEMIKLQRTRILKEKLKRKLPADFKVLEA-SDLVYTVSAQEYWQQALLT 433
++SQR+ RN + ++ E L++ + + +V E + ++AQ+ L T
Sbjct: 1392 LESQRQLEETRN-----KAAQVHAESLQQVVQSQREVTEVLQEATCKIAAQQSETARLTT 1446
Query: 434 EEETEIPKLREYIRKSLLD 452
+ +I ++ E R + D
Sbjct: 1447 DAARQICEMAELTRTHISD 1465
>gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens]
Length = 625
Score = 35.0 bits (79), Expect = 0.27
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 685 RMKDAIRRGVDRQVAEGMFERAQERMQHQFQQLKTGIVEKVKGSITTMLALASSQGDGLY 744
R+K+A + + Q E+AQE + + + + ++VK ++ L +G
Sbjct: 475 RLKEAEGKEEELQDVRDQLEQAQEERDCHLKTISS-LKQEVKDTVDGQRIL-EKKGSAAL 532
Query: 745 KELA-DVGSEYKEMEKLHRSLREVAENARLRKGMQEFLLRA--SPSK 788
K+L + E K +KL L+++ N++ R G++E +L SPS+
Sbjct: 533 KDLKRQLHLERKRADKLQERLQDILTNSKSRSGLEELVLSEMNSPSR 579
>gi|83716024 kinesin family member 21B [Homo sapiens]
Length = 1624
Score = 34.7 bits (78), Expect = 0.36
Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 7/133 (5%)
Query: 671 YEEAAQITGKKACERMKDAIRRGVDRQVAEGMFERAQERMQHQFQQLKTGIVEKVKGSIT 730
Y+ ++ G+ E D R Q G + MQ + + + +
Sbjct: 402 YKAGKRVIGEDGAEGYSDLFRENAMLQKENGALRLRVKAMQEAIDAINNRVTQLMSQEAN 461
Query: 731 TMLALASSQGDGL-------YKELADVGSEYKEMEKLHRSLREVAENARLRKGMQEFLLR 783
+LA A + + +E+ ++ ++ E E ++ SLR A R
Sbjct: 462 LLLAKAGDGNEAIGALIQNYIREIEELRTKLLESEAMNESLRRSLSRASARSPYSLGASP 521
Query: 784 ASPSKAGPPGTSL 796
A+P+ G P +S+
Sbjct: 522 AAPAFGGSPASSM 534
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 34.3 bits (77), Expect = 0.47
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 151 EAKIHLLSDQEWREE--LKNLTKLLHRTEELSREEADAWNRDEAVEEATWKLQ 201
E KI ++ WR+E LK K+ + E++ R+E W ++E ++E K+Q
Sbjct: 475 EEKIQEQEEKTWRQEKLLKQEEKIWEQEEKMWRQEEKMWEQEEKMQEQEEKMQ 527
Score = 34.3 bits (77), Expect = 0.47
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 149 QYEAKIHLLSDQEWREELK---NLTKLLHRTEELSREEADAWNRDEAVEEATWKLQMIYG 205
+ E K+ ++ W +E K K+ + E++ +E W ++E ++E +LQ +
Sbjct: 500 EQEEKMWRQEEKMWEQEEKMQEQEEKMQRQEEKMREQEVRLWQQEEKMQEQEVRLQELEE 559
Query: 206 NGAESKNYEELL----RAKPKRKIPTSRVI---TLKAEEAEELSIKLDPY 248
+ ELL R +++PT I LK++EA+ L + D Y
Sbjct: 560 RLGKLGQKAELLGGAGRESGSQRLPTLTPILQVELKSQEAQSLQQQQDHY 609
Score = 32.3 bits (72), Expect = 1.8
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 149 QYEAKIHLLSDQEWREELKNLTKLLHRTEELSREEADAWNRDEAVEEATWKLQ----MIY 204
+ E KI D+ WR+E K+ + E++ +E W ++E + E K+Q ++
Sbjct: 336 EQEEKIREQEDKMWRQE----EKIREQEEKIREQEEKMWRQEEKIREQDEKIQEQEEEMW 391
Query: 205 GNGAESKNYEELLRAKPKRKIPTSRVITLKAEEAEELSIKLDPYIR 250
+ + EE + K R+ R K E EE + + IR
Sbjct: 392 RQEEKIREQEEKRQEKMWRQEKKMREQDEKIREQEEEMWRQEEKIR 437
Score = 30.4 bits (67), Expect = 6.7
Identities = 25/125 (20%), Positives = 55/125 (44%), Gaps = 14/125 (11%)
Query: 149 QYEAKIHLLSDQEWREELKNLTKLLHRTEELSREEADAWNRDEAV---EEATWKL----- 200
+ + KI ++ WR+E K + R E++ R+E +DE + EE W+
Sbjct: 378 EQDEKIQEQEEEMWRQEEKIREQEEKRQEKMWRQEKKMREQDEKIREQEEEMWRQEEKIR 437
Query: 201 ---QMIYGNGAESKNYEELLRAKPKRKIPTSRVITL---KAEEAEELSIKLDPYIRTQRR 254
+M+ + + EE ++ + ++ I K +E EE + + + ++ + +
Sbjct: 438 ELEEMMQDQEEKLREVEEKMQEEEEKMQEQEEKIQRQEEKIQEQEEKTWRQEKLLKQEEK 497
Query: 255 DWDGE 259
W+ E
Sbjct: 498 IWEQE 502
>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 34.3 bits (77), Expect = 0.47
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 151 EAKIHLLSDQEWREE--LKNLTKLLHRTEELSREEADAWNRDEAVEEATWKLQ 201
E KI ++ WR+E LK K+ + E++ R+E W ++E ++E K+Q
Sbjct: 475 EEKIQEQEEKTWRQEKLLKQEEKIWEQEEKMWRQEEKMWEQEEKMQEQEEKMQ 527
Score = 34.3 bits (77), Expect = 0.47
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 149 QYEAKIHLLSDQEWREELK---NLTKLLHRTEELSREEADAWNRDEAVEEATWKLQMIYG 205
+ E K+ ++ W +E K K+ + E++ +E W ++E ++E +LQ +
Sbjct: 500 EQEEKMWRQEEKMWEQEEKMQEQEEKMQRQEEKMREQEVRLWQQEEKMQEQEVRLQELEE 559
Query: 206 NGAESKNYEELL----RAKPKRKIPTSRVI---TLKAEEAEELSIKLDPY 248
+ ELL R +++PT I LK++EA+ L + D Y
Sbjct: 560 RLGKLGQKAELLGGAGRESGSQRLPTLTPILQVELKSQEAQSLQQQQDHY 609
Score = 32.3 bits (72), Expect = 1.8
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 149 QYEAKIHLLSDQEWREELKNLTKLLHRTEELSREEADAWNRDEAVEEATWKLQ----MIY 204
+ E KI D+ WR+E K+ + E++ +E W ++E + E K+Q ++
Sbjct: 336 EQEEKIREQEDKMWRQE----EKIREQEEKIREQEEKMWRQEEKIREQDEKIQEQEEEMW 391
Query: 205 GNGAESKNYEELLRAKPKRKIPTSRVITLKAEEAEELSIKLDPYIR 250
+ + EE + K R+ R K E EE + + IR
Sbjct: 392 RQEEKIREQEEKRQEKMWRQEKKMREQDEKIREQEEEMWRQEEKIR 437
Score = 30.4 bits (67), Expect = 6.7
Identities = 25/125 (20%), Positives = 55/125 (44%), Gaps = 14/125 (11%)
Query: 149 QYEAKIHLLSDQEWREELKNLTKLLHRTEELSREEADAWNRDEAV---EEATWKL----- 200
+ + KI ++ WR+E K + R E++ R+E +DE + EE W+
Sbjct: 378 EQDEKIQEQEEEMWRQEEKIREQEEKRQEKMWRQEKKMREQDEKIREQEEEMWRQEEKIR 437
Query: 201 ---QMIYGNGAESKNYEELLRAKPKRKIPTSRVITL---KAEEAEELSIKLDPYIRTQRR 254
+M+ + + EE ++ + ++ I K +E EE + + + ++ + +
Sbjct: 438 ELEEMMQDQEEKLREVEEKMQEEEEKMQEQEEKIQRQEEKIQEQEEKTWRQEKLLKQEEK 497
Query: 255 DWDGE 259
W+ E
Sbjct: 498 IWEQE 502
>gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 34.3 bits (77), Expect = 0.47
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 372 NQAIQSQREAVLERNEMIKL---QRTRILKEKLKRKLPADFKVLEASDLVYTVSAQE--- 425
+Q +Q Q + V E E IKL + TR L+EKLKR L + + ++L + + E
Sbjct: 1499 HQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHL--EENKISKTELDWFLQDLEREI 1556
Query: 426 -YWQQALLTEEETEIPKLREYIRKSLLDKKKRTVTKYVTEAFGLLLLTDSFNSTQNLPNE 484
WQQ E + + L++ I+K + T E L L S + L NE
Sbjct: 1557 KKWQQE-KKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKEHELHLDQSLEISNTLTNE 1615
Query: 485 HLHM-SVLRRFAEEKVELLEKAIAQCFACME 514
+ + +++ E+ E ++A+A + +E
Sbjct: 1616 KMKIEEYIKKGKEDYEESHQRAVAAEVSVLE 1646
>gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 34.3 bits (77), Expect = 0.47
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 372 NQAIQSQREAVLERNEMIKL---QRTRILKEKLKRKLPADFKVLEASDLVYTVSAQE--- 425
+Q +Q Q + V E E IKL + TR L+EKLKR L + + ++L + + E
Sbjct: 1499 HQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHL--EENKISKTELDWFLQDLEREI 1556
Query: 426 -YWQQALLTEEETEIPKLREYIRKSLLDKKKRTVTKYVTEAFGLLLLTDSFNSTQNLPNE 484
WQQ E + + L++ I+K + T E L L S + L NE
Sbjct: 1557 KKWQQE-KKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKEHELHLDQSLEISNTLTNE 1615
Query: 485 HLHM-SVLRRFAEEKVELLEKAIAQCFACME 514
+ + +++ E+ E ++A+A + +E
Sbjct: 1616 KMKIEEYIKKGKEDYEESHQRAVAAEVSVLE 1646
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 33.9 bits (76), Expect = 0.61
Identities = 60/315 (19%), Positives = 127/315 (40%), Gaps = 47/315 (14%)
Query: 160 QEWREELKNLTKLLHRTEELSREEADAWNRDEAVEEATWKLQMIYGNGAESKNYEELLRA 219
QEW E+++ + + EE RE+ + R E +M++ + + EE++
Sbjct: 310 QEWEEKIQEQEEKIREQEEKIREQEEKMRRQE---------EMMWEKEEKMRRQEEMMWE 360
Query: 220 KPKRKIPTSRVITLKAEEAEELSIKL---------------DPYIRTQRRDWDGEAAEMR 264
K ++ ++ K E+ EL K+ + IR Q + + EA R
Sbjct: 361 KEEKMRRLEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWR 420
Query: 265 IWPLIKHVEVTLPKSD----LIPEGVVLVDIPGTGDFNSKRDEMWK--KTIDKCSVIWVI 318
I+ E + + + E + + + +++EMW+ + I + IW
Sbjct: 421 QEEKIREQEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQ 480
Query: 319 SDIERVSGGQAHEDLLNESIKACQRGFCRDVALVVTKMDKLHLPE---YLRERKAGNQ-- 373
+ + HE E I+ + R + + +K+ E + +E K Q
Sbjct: 481 KE-------KMHE---QEKIRKQEEKVWRQEEKMHDQEEKIREQEEKMWRQEEKIREQEE 530
Query: 374 AIQSQREAVLERNEMIKLQRTRILKEKLKRKLPADFKVLEASDLVYTVSAQEYWQQALLT 433
I+ Q E + E+ EM++ Q ++ ++ + K+ K+ + + + Q+ +
Sbjct: 531 KIREQEEKIREQEEMMQEQEEKMGEQ--EEKMQEQEKMRRQEEKIREQEEKIREQKEKIR 588
Query: 434 EEETEIPKLREYIRK 448
E+E +I + E IR+
Sbjct: 589 EQEEKIWEQEEKIRE 603
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 33.9 bits (76), Expect = 0.61
Identities = 36/147 (24%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 358 KLHLPEYLRERKAGNQAIQSQREAVLERNEMIKLQRTRILKEKLKRKLPADFKVLEASDL 417
+L + YL+ + +Q I ++R+ + ER E ++ + KE+L+++ KV +A +
Sbjct: 551 QLAVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEE 610
Query: 418 VYTVSAQEYWQQALLTEEETEIPKLREYIRKSLLDKKKRTVTKYVTEAFGLLLLTDSFNS 477
A+E ++ +L E E +I K + +R+ L KK T+ +AF + + D
Sbjct: 611 RLRQEAKEREKERILQEHE-QIKK--KTVRERLEQIKK---TELGAKAFKDIDIED---- 660
Query: 478 TQNLPNEHLHMSVLRRFAEEKVELLEK 504
+ L + + + + +EK EL E+
Sbjct: 661 LEELDPDFIMAKQVEQLEKEKKELQER 687
>gi|51317384 GLE1 RNA export mediator homolog isoform 1 [Homo
sapiens]
Length = 698
Score = 33.5 bits (75), Expect = 0.80
Identities = 25/116 (21%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 137 SCIVQVSSGC----CVQYEAKIHLLSDQE----WREELKNLTKLLHRTEELSREEADAWN 188
S ++Q S G CV+ +H + E W+EE + + L + D W
Sbjct: 117 SMVLQSSRGIKVEGCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWK 176
Query: 189 RDEAVEEATWKLQMIYGNGAESKNYEELLRAKPKRKIPTSRVITLKAEEAEELSIK 244
+ +E +++ + E+ ++E L+A+ + + ++++ LK EAE+ +K
Sbjct: 177 ELKQHKEFQDLREVMEKSSREALGHQEKLKAEHRHR---AKILNLKLREAEQQRVK 229
>gi|4557627 GLE1 RNA export mediator homolog isoform 2 [Homo
sapiens]
Length = 659
Score = 33.5 bits (75), Expect = 0.80
Identities = 25/116 (21%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 137 SCIVQVSSGC----CVQYEAKIHLLSDQE----WREELKNLTKLLHRTEELSREEADAWN 188
S ++Q S G CV+ +H + E W+EE + + L + D W
Sbjct: 117 SMVLQSSRGIKVEGCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWK 176
Query: 189 RDEAVEEATWKLQMIYGNGAESKNYEELLRAKPKRKIPTSRVITLKAEEAEELSIK 244
+ +E +++ + E+ ++E L+A+ + + ++++ LK EAE+ +K
Sbjct: 177 ELKQHKEFQDLREVMEKSSREALGHQEKLKAEHRHR---AKILNLKLREAEQQRVK 229
>gi|122937416 hypothetical protein LOC85452 [Homo sapiens]
Length = 762
Score = 32.7 bits (73), Expect = 1.4
Identities = 43/194 (22%), Positives = 83/194 (42%), Gaps = 14/194 (7%)
Query: 296 DFNSKRDEMWKKTI-DKCSVIWVISDIERVSGGQAHEDLLNESIKACQRGFCRDVALVVT 354
+ ++ D++ KKT D+ + ++ + ++L E ++ R CR ++
Sbjct: 55 ELDTDADKLKKKTAEDRTQAFHLRQNLSALDKMHEEQELFTEKMRGELRA-CRQRRDLID 113
Query: 355 KMDKLHLPEYLRERKAGNQAIQSQREAVLERNEMIKLQRTRILKEKLKRKLPADFKVLEA 414
K + E E +AGN A + +AV R +L+ R L+ + + L E+
Sbjct: 114 KQQEAVAAEIATEEEAGNMAAVGRLQAV-SRRLFAELENERDLQSRTEAVLK------ES 166
Query: 415 SDLVYTVSAQEYWQQALLT--EEETEIPKLREYIRKS-LLDKKKRTVTKYVTEAFGLLLL 471
+ ++ + QE +A T EE E R +R + L +++ + K E LL +
Sbjct: 167 ENTMWHIEIQEGRLEAFRTADREEVEATGRRLQVRAAEQLCREQEALGK--VERNRLLRI 224
Query: 472 TDSFNSTQNLPNEH 485
S N+ + L H
Sbjct: 225 RKSLNTQKELGLRH 238
>gi|198442878 tripartite motif-containing 17 isoform 3 [Homo
sapiens]
Length = 343
Score = 32.7 bits (73), Expect = 1.4
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 24/118 (20%)
Query: 363 EYLRERKAGNQAIQSQREAVL-ERNEMIKLQRTRILKEKLKRKLPADFKVLEASDLVYTV 421
EYLRE+ +Q++ E L E +K +R RI+ E K L Y V
Sbjct: 151 EYLREQITRTGNLQAREEQSLAEWQGKVKERRERIVLEFEKMNL-------------YLV 197
Query: 422 SAQEYWQQALLTEEETEIPKLREYIRKSLLDKKKRTVTKYVTEAFGLLLLTDSFNSTQ 479
++ QAL TEEE +LRE + + LD++ ++ LLLL STQ
Sbjct: 198 EEEQRLLQALETEEEETASRLRESV--ACLDRQGHSLE--------LLLLQLEERSTQ 245
>gi|68160935 tripartite motif-containing 17 isoform 2 [Homo sapiens]
Length = 450
Score = 32.7 bits (73), Expect = 1.4
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 24/118 (20%)
Query: 363 EYLRERKAGNQAIQSQREAVL-ERNEMIKLQRTRILKEKLKRKLPADFKVLEASDLVYTV 421
EYLRE+ +Q++ E L E +K +R RI+ E K L Y V
Sbjct: 124 EYLREQITRTGNLQAREEQSLAEWQGKVKERRERIVLEFEKMNL-------------YLV 170
Query: 422 SAQEYWQQALLTEEETEIPKLREYIRKSLLDKKKRTVTKYVTEAFGLLLLTDSFNSTQ 479
++ QAL TEEE +LRE + + LD++ ++ LLLL STQ
Sbjct: 171 EEEQRLLQALETEEEETASRLRESV--ACLDRQGHSLE--------LLLLQLEERSTQ 218
>gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 32.7 bits (73), Expect = 1.4
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 24/118 (20%)
Query: 363 EYLRERKAGNQAIQSQREAVL-ERNEMIKLQRTRILKEKLKRKLPADFKVLEASDLVYTV 421
EYLRE+ +Q++ E L E +K +R RI+ E K L Y V
Sbjct: 151 EYLREQITRTGNLQAREEQSLAEWQGKVKERRERIVLEFEKMNL-------------YLV 197
Query: 422 SAQEYWQQALLTEEETEIPKLREYIRKSLLDKKKRTVTKYVTEAFGLLLLTDSFNSTQ 479
++ QAL TEEE +LRE + + LD++ ++ LLLL STQ
Sbjct: 198 EEEQRLLQALETEEEETASRLRESV--ACLDRQGHSLE--------LLLLQLEERSTQ 245
>gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 32.7 bits (73), Expect = 1.4
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 24/118 (20%)
Query: 363 EYLRERKAGNQAIQSQREAVL-ERNEMIKLQRTRILKEKLKRKLPADFKVLEASDLVYTV 421
EYLRE+ +Q++ E L E +K +R RI+ E K L Y V
Sbjct: 151 EYLREQITRTGNLQAREEQSLAEWQGKVKERRERIVLEFEKMNL-------------YLV 197
Query: 422 SAQEYWQQALLTEEETEIPKLREYIRKSLLDKKKRTVTKYVTEAFGLLLLTDSFNSTQ 479
++ QAL TEEE +LRE + + LD++ ++ LLLL STQ
Sbjct: 198 EEEQRLLQALETEEEETASRLRESV--ACLDRQGHSLE--------LLLLQLEERSTQ 245
>gi|12711674 UPF3 regulator of nonsense transcripts homolog B
isoform 2 [Homo sapiens]
Length = 470
Score = 32.7 bits (73), Expect = 1.4
Identities = 74/315 (23%), Positives = 123/315 (39%), Gaps = 65/315 (20%)
Query: 159 DQEWREELKNLT---KLLHRTEELSREEADAWNRDEAVEEATWKLQMIYGNGAESKNYEE 215
D E+R+ L++ + + T E EE +A NR+ ++ T L + KN +
Sbjct: 157 DPEYRKFLESYATDNEKMTSTPETLLEEIEAKNRELIAKKTTPLLSFL-------KNKQR 209
Query: 216 LLRAKPKRKIPTSRVITLKAEEAEELSIKLDPYIRTQRRDWDGEAAEMRIWPLIKHVEVT 275
+ + KR+ R I K + EE RR W E R K +E
Sbjct: 210 M--REEKREERRRREIERKRQREEE------------RRKWKEEEKRKR-----KDIE-K 249
Query: 276 LPKSDLIPEG--------VVLVDIPGTGDFNSKRDEMWKKTIDKCSVIWVISDIERVSGG 327
L K D IPE + L+ P GD K +DK + +SD ER SG
Sbjct: 250 LKKIDRIPERDKLKDEPKIKLLKKPEKGDEKELDKREKAKKLDKEN----LSD-ERASGQ 304
Query: 328 ------QAHEDLLNESIKACQRGFCRDVALVVTKMDKLHLPEYLRERKAGNQAIQSQREA 381
++ +L +E K + RD E RE + + I +RE
Sbjct: 305 SCTLPKRSDSELKDEKPKRPEDESGRDYR------------EREREYERDQERILRERER 352
Query: 382 VLERNEMIKLQRTRILKEKLKRKLPADFKVLEASDLVYTVSAQEYWQQALLTEEETEIPK 441
+ + E + Q+ R KEK ++ + K + D + + +++ + E+TE K
Sbjct: 353 LKRQEEERRRQKERYEKEKTFKRKEEEMK--KEKDTLRDKGKKAESTESIGSSEKTE--K 408
Query: 442 LREYIRKSLLDKKKR 456
E +++ + K R
Sbjct: 409 KEEVVKRDRIRNKDR 423
>gi|187608585 CASP8 and FADD-like apoptosis regulator isoform 2
[Homo sapiens]
Length = 221
Score = 32.3 bits (72), Expect = 1.8
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 331 EDLLNESIKACQRGFCRDVALVVTKMDKLHLPEYLRERKAGNQAIQSQREAVLERNEMIK 390
E+ L+ K CRDVA+ V + L + LRER G ++ E + +
Sbjct: 10 EEALDTDEKEMLLFLCRDVAIDVVPPNVRDLLDILRER--GKLSVGDLAEL------LYR 61
Query: 391 LQRTRILKEKLKRKLPA-DFKVLEASDLV--YTVSAQEYWQQALLTEEETEIPKLREYIR 447
++R +LK LK A + +L LV Y V E + ++ + I +++Y+
Sbjct: 62 VRRFDLLKRILKMDRKAVETHLLRNPHLVSDYRVLMAEIGEDLDKSDVSSLIFLMKDYMG 121
Query: 448 KSLLDKKKRTVTKYVTEAFGLLLLTDSFNSTQNLPNEHLHMSVLRRFAEEKVELLEKAIA 507
+ + K+K + V + L A ++++LLEK +
Sbjct: 122 RGKISKEKSFLDLVV------------------------ELEKLNLVAPDQLDLLEKCLK 157
Query: 508 QC----FACMEQPLQEGVRTARTSYRCILRACLVRS 539
Q ++ V+ A TSYR +L+A + +S
Sbjct: 158 NIHRIDLKTKIQKYKQSVQGAGTSYRNVLQAAIQKS 193
>gi|187608577 CASP8 and FADD-like apoptosis regulator isoform 1
[Homo sapiens]
Length = 480
Score = 32.3 bits (72), Expect = 1.8
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 331 EDLLNESIKACQRGFCRDVALVVTKMDKLHLPEYLRERKAGNQAIQSQREAVLERNEMIK 390
E+ L+ K CRDVA+ V + L + LRER G ++ E + +
Sbjct: 10 EEALDTDEKEMLLFLCRDVAIDVVPPNVRDLLDILRER--GKLSVGDLAEL------LYR 61
Query: 391 LQRTRILKEKLKRKLPA-DFKVLEASDLV--YTVSAQEYWQQALLTEEETEIPKLREYIR 447
++R +LK LK A + +L LV Y V E + ++ + I +++Y+
Sbjct: 62 VRRFDLLKRILKMDRKAVETHLLRNPHLVSDYRVLMAEIGEDLDKSDVSSLIFLMKDYMG 121
Query: 448 KSLLDKKKRTVTKYVTEAFGLLLLTDSFNSTQNLPNEHLHMSVLRRFAEEKVELLEKAIA 507
+ + K+K + V + L A ++++LLEK +
Sbjct: 122 RGKISKEKSFLDLVV------------------------ELEKLNLVAPDQLDLLEKCLK 157
Query: 508 QC----FACMEQPLQEGVRTARTSYRCILRACLVRS 539
Q ++ V+ A TSYR +L+A + +S
Sbjct: 158 NIHRIDLKTKIQKYKQSVQGAGTSYRNVLQAAIQKS 193
>gi|187608571 CASP8 and FADD-like apoptosis regulator isoform 1
[Homo sapiens]
Length = 480
Score = 32.3 bits (72), Expect = 1.8
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 331 EDLLNESIKACQRGFCRDVALVVTKMDKLHLPEYLRERKAGNQAIQSQREAVLERNEMIK 390
E+ L+ K CRDVA+ V + L + LRER G ++ E + +
Sbjct: 10 EEALDTDEKEMLLFLCRDVAIDVVPPNVRDLLDILRER--GKLSVGDLAEL------LYR 61
Query: 391 LQRTRILKEKLKRKLPA-DFKVLEASDLV--YTVSAQEYWQQALLTEEETEIPKLREYIR 447
++R +LK LK A + +L LV Y V E + ++ + I +++Y+
Sbjct: 62 VRRFDLLKRILKMDRKAVETHLLRNPHLVSDYRVLMAEIGEDLDKSDVSSLIFLMKDYMG 121
Query: 448 KSLLDKKKRTVTKYVTEAFGLLLLTDSFNSTQNLPNEHLHMSVLRRFAEEKVELLEKAIA 507
+ + K+K + V + L A ++++LLEK +
Sbjct: 122 RGKISKEKSFLDLVV------------------------ELEKLNLVAPDQLDLLEKCLK 157
Query: 508 QC----FACMEQPLQEGVRTARTSYRCILRACLVRS 539
Q ++ V+ A TSYR +L+A + +S
Sbjct: 158 NIHRIDLKTKIQKYKQSVQGAGTSYRNVLQAAIQKS 193
>gi|7661636 SYF2 homolog, RNA splicing factor isoform 1 [Homo
sapiens]
Length = 243
Score = 32.3 bits (72), Expect = 1.8
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 373 QAIQSQREAVLERNEMIKLQRTRILKEKLKRKLPADFKVLEASDLVYTVSAQEYWQQALL 432
Q ++ RE L RNE KL +++E + KLPA+++ +A L + + +E ++
Sbjct: 32 QRLRKFRELHLMRNEARKLNHQEVVEEDKRLKLPANWEAKKAR-LEWELKEEEKKKECAA 90
Query: 433 TEEETEIPKLRE 444
E+ E KL E
Sbjct: 91 RGEDYEKVKLLE 102
>gi|27734911 DAZ interacting protein 1-like [Homo sapiens]
Length = 767
Score = 32.3 bits (72), Expect = 1.8
Identities = 63/308 (20%), Positives = 124/308 (40%), Gaps = 38/308 (12%)
Query: 171 KLLHRTEELSREEADAWNRDEAVE--EATWKLQMIYGN-----GAESKNYEELLRAKPKR 223
+L+H+ E +++E D W E + KL+ ++ + ++ EE LRA
Sbjct: 239 ELIHQREIEAKKEFDKWKEQEWTKLYGEIDKLKKLFWDEFKNVAKQNSTLEEKLRALQSH 298
Query: 224 KIPTSRVITLKAEEAEELSIK------LDPYIRTQRRDWDGEAAEMRIWPLIKHVEVTLP 277
+ S++ +L+ EE+EE + L Q+ +W + E+ H E
Sbjct: 299 SVMESKLGSLRDEESEEWLRQARELQALREKTEIQKTEWKRKVKEL-------HEEHMAE 351
Query: 278 KSDLIPEGVVLVDIPGTGDFNSKRDEMWKKTIDKCSVIWVISDIERVSGGQAHEDLLNES 337
K +L E L + +D+ +C + + + ++ + A ++ + +S
Sbjct: 352 KKELQEENQRL-------QASLSQDQKKAAAQSQCQISTLRAQLQEQARIIASQEEMIQS 404
Query: 338 IKACQ-RGFCRDVALVVTKMDKLHLPEYLRERKAGNQAIQSQREAVLERNEMIKLQRTRI 396
+ + G + V T+ D PE E +Q Q + A L RN + I
Sbjct: 405 LSLRKVEGIHKVPKAVDTEEDS---PE---EEMEDSQDEQHKVLAALRRNPTLLKHFRPI 458
Query: 397 LKEKLKRKLPADFKVLEASDLVYTVSAQEYWQQALLTEEETEIPKLREYIRKSLLDKKKR 456
L++ L+ KL + +A + ++ + + L + E + K E++ SL K +
Sbjct: 459 LEDTLEEKLESMGIRKDAKGI--SIQTLRHLESLLRVQREQKARKFSEFL--SLRGKLVK 514
Query: 457 TVTKYVTE 464
VT E
Sbjct: 515 EVTSRAKE 522
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 32.0 bits (71), Expect = 2.3
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 28/161 (17%)
Query: 634 IQEISAILGGLEDHILRRKRRIYESLTASVQSDLKLCYEEAAQITGKKACERMKDAIRRG 693
+ E+ L ED LR L +VQ+ LK +E Q + ER RR
Sbjct: 1573 VTELEDELTAAEDAKLR--------LEVTVQA-LKTQHERDLQGRDEAGEER-----RRQ 1618
Query: 694 VDRQVAEGMFERAQERMQHQFQQLKTGIVEKVKGSITTMLALASSQGDG-------LYKE 746
+ +Q+ + ER +ER Q + L +K++G + + A +S G G L K
Sbjct: 1619 LAKQLRDAEVERDEERKQ---RTLAVAARKKLEGELEELKAQMASAGQGKEEAVKQLRKM 1675
Query: 747 LADVGSEYKEMEKLHRSLREV----AENARLRKGMQEFLLR 783
A + ++E+E+ S E+ E+ + KG++ +LR
Sbjct: 1676 QAQMKELWREVEETRTSREEIFSQNRESEKRLKGLEAEVLR 1716
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 32.0 bits (71), Expect = 2.3
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 28/161 (17%)
Query: 634 IQEISAILGGLEDHILRRKRRIYESLTASVQSDLKLCYEEAAQITGKKACERMKDAIRRG 693
+ E+ L ED LR L +VQ+ LK +E Q + ER RR
Sbjct: 1565 VTELEDELTAAEDAKLR--------LEVTVQA-LKTQHERDLQGRDEAGEER-----RRQ 1610
Query: 694 VDRQVAEGMFERAQERMQHQFQQLKTGIVEKVKGSITTMLALASSQGDG-------LYKE 746
+ +Q+ + ER +ER Q + L +K++G + + A +S G G L K
Sbjct: 1611 LAKQLRDAEVERDEERKQ---RTLAVAARKKLEGELEELKAQMASAGQGKEEAVKQLRKM 1667
Query: 747 LADVGSEYKEMEKLHRSLREV----AENARLRKGMQEFLLR 783
A + ++E+E+ S E+ E+ + KG++ +LR
Sbjct: 1668 QAQMKELWREVEETRTSREEIFSQNRESEKRLKGLEAEVLR 1708
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 32.0 bits (71), Expect = 2.3
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 28/161 (17%)
Query: 634 IQEISAILGGLEDHILRRKRRIYESLTASVQSDLKLCYEEAAQITGKKACERMKDAIRRG 693
+ E+ L ED LR L +VQ+ LK +E Q + ER RR
Sbjct: 1606 VTELEDELTAAEDAKLR--------LEVTVQA-LKTQHERDLQGRDEAGEER-----RRQ 1651
Query: 694 VDRQVAEGMFERAQERMQHQFQQLKTGIVEKVKGSITTMLALASSQGDG-------LYKE 746
+ +Q+ + ER +ER Q + L +K++G + + A +S G G L K
Sbjct: 1652 LAKQLRDAEVERDEERKQ---RTLAVAARKKLEGELEELKAQMASAGQGKEEAVKQLRKM 1708
Query: 747 LADVGSEYKEMEKLHRSLREV----AENARLRKGMQEFLLR 783
A + ++E+E+ S E+ E+ + KG++ +LR
Sbjct: 1709 QAQMKELWREVEETRTSREEIFSQNRESEKRLKGLEAEVLR 1749
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 32.0 bits (71), Expect = 2.3
Identities = 58/259 (22%), Positives = 111/259 (42%), Gaps = 25/259 (9%)
Query: 325 SGGQAHEDLLNESIKACQRGFCRDVALVVTKMDKLHLPEYLRERKAGNQAIQSQREAVLE 384
S + E L E +++ +R V+ +VT DKL L RK + EAV E
Sbjct: 165 SSSEEMESQLQERVESSRRA----VSQIVTVYDKLQEKVELLSRKLNSGDNLIVEEAVQE 220
Query: 385 RN-----EMIKLQRTRILKEKLKRKLPADFKVLEASDLVYTVSAQEYWQQALLTEEETEI 439
N E ++LQ L ++ R + +F L++ V T ++ ++++ + + +I
Sbjct: 221 LNSFLAQENMRLQELTDLLQEKHRTMSQEFSKLQSK--VETAESRVSVLESMIDDLQWDI 278
Query: 440 PKLREYIRKSLLDKKKRTVTKYVTEAFGLLLLTDSFNSTQNLPNEHLHMSVLRRFAEEKV 499
K+R+ R+ L++ V + V + + + +L + ++ R+F E
Sbjct: 279 DKIRK--REQRLNRHLAEVLERVNSKGYKV-----YGAGSSLYGGTITINA-RKFEEMNA 330
Query: 500 ELLE-KAIAQCFACMEQPLQEGVRTARTSYRCILRACLVRSKGNQGFHQTLKAVCLKNG- 557
EL E K +AQ C + L++ T + +RS Q +T + C+++
Sbjct: 331 ELEENKELAQNRLCELEKLRQDFEEVTTQNEKL--KVELRSAVEQVVKETPEYRCMQSQF 388
Query: 558 --IYASRTLARIDLNEALT 574
+Y + L+EA T
Sbjct: 389 SVLYNESLQLKAHLDEART 407
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,215,374
Number of Sequences: 37866
Number of extensions: 1199591
Number of successful extensions: 4664
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 4580
Number of HSP's gapped (non-prelim): 150
length of query: 796
length of database: 18,247,518
effective HSP length: 110
effective length of query: 686
effective length of database: 14,082,258
effective search space: 9660428988
effective search space used: 9660428988
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.