Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 149588660
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149588660 glutathione S-transferase, C-terminal domain
containing isoform 1 [Homo sapiens]
(633 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149588660 glutathione S-transferase, C-terminal domain contai... 1279 0.0
gi|154707916 glutathione S-transferase, C-terminal domain contai... 1003 0.0
gi|4758862 eukaryotic translation elongation factor 1 epsilon 1 ... 38 0.025
gi|87299628 biorientation of chromosomes in cell division 1-like... 33 0.61
gi|110349719 titin isoform N2-A [Homo sapiens] 33 0.80
gi|110349717 titin isoform novex-2 [Homo sapiens] 33 0.80
gi|110349713 titin isoform novex-1 [Homo sapiens] 33 0.80
gi|110349715 titin isoform N2-B [Homo sapiens] 33 0.80
gi|8659574 transcription factor E3 [Homo sapiens] 33 0.80
gi|33188443 microfilament and actin filament cross-linker protei... 33 1.0
gi|33188445 microfilament and actin filament cross-linker protei... 33 1.0
gi|9966827 PEST proteolytic signal containing nuclear protein [H... 32 1.8
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 31 3.0
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H... 31 4.0
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 31 4.0
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 31 4.0
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 31 4.0
gi|90669307 cyclin B3 isoform 3 [Homo sapiens] 31 4.0
gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens] 31 4.0
gi|62177127 myosin heavy chain Myr 8 [Homo sapiens] 31 4.0
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H... 30 5.2
gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo ... 30 5.2
gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo ... 30 5.2
gi|51479173 dynein, axonemal, heavy chain 11 [Homo sapiens] 30 5.2
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 30 5.2
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 30 5.2
gi|87162461 fragile X mental retardation 2 [Homo sapiens] 30 6.8
gi|119703749 hydrocephalus inducing isoform a [Homo sapiens] 30 6.8
gi|16306580 F-box and leucine-rich repeat protein 11 [Homo sapiens] 30 8.8
gi|239751532 PREDICTED: similar to vacuolar protein sorting 53 (... 30 8.8
>gi|149588660 glutathione S-transferase, C-terminal domain
containing isoform 1 [Homo sapiens]
Length = 633
Score = 1279 bits (3309), Expect = 0.0
Identities = 633/633 (100%), Positives = 633/633 (100%)
Query: 1 MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVSRDS 60
MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVSRDS
Sbjct: 1 MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVSRDS 60
Query: 61 SLLRDDLIQDVEIQIISRQELPPIVQNCCLPAVVERSDNFCRAGLAVVLRHIIQKSYEAD 120
SLLRDDLIQDVEIQIISRQELPPIVQNCCLPAVVERSDNFCRAGLAVVLRHIIQKSYEAD
Sbjct: 61 SLLRDDLIQDVEIQIISRQELPPIVQNCCLPAVVERSDNFCRAGLAVVLRHIIQKSYEAD 120
Query: 121 PLKKELLELLGFKKTCLKACAEVSQWTRLCELTIPLAIENFLRESSDQPPTIPVEILQLE 180
PLKKELLELLGFKKTCLKACAEVSQWTRLCELTIPLAIENFLRESSDQPPTIPVEILQLE
Sbjct: 121 PLKKELLELLGFKKTCLKACAEVSQWTRLCELTIPLAIENFLRESSDQPPTIPVEILQLE 180
Query: 181 KKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELK 240
KKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELK
Sbjct: 181 KKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELK 240
Query: 241 VAFSKLTVQEEPATTNREPSHIRKAKASDLPPLEHVFAEGLYFTLADIVLLPCIHHFLVI 300
VAFSKLTVQEEPATTNREPSHIRKAKASDLPPLEHVFAEGLYFTLADIVLLPCIHHFLVI
Sbjct: 241 VAFSKLTVQEEPATTNREPSHIRKAKASDLPPLEHVFAEGLYFTLADIVLLPCIHHFLVI 300
Query: 301 ISRKFSEKLVEFPLLASWYQRIQEVPGVKTAASKCGIQFLHLPKLLTTSTEQHPNLCEVP 360
ISRKFSEKLVEFPLLASWYQRIQEVPGVKTAASKCGIQFLHLPKLLTTSTEQHPNLCEVP
Sbjct: 301 ISRKFSEKLVEFPLLASWYQRIQEVPGVKTAASKCGIQFLHLPKLLTTSTEQHPNLCEVP 360
Query: 361 GVEEQSDPLFIGGPRPTMAKLMEKGIEVMFSPHPCPTWTLDWNVLPAAVSPKEGKMSSDR 420
GVEEQSDPLFIGGPRPTMAKLMEKGIEVMFSPHPCPTWTLDWNVLPAAVSPKEGKMSSDR
Sbjct: 361 GVEEQSDPLFIGGPRPTMAKLMEKGIEVMFSPHPCPTWTLDWNVLPAAVSPKEGKMSSDR 420
Query: 421 ALRKQQQLNNLVYVVTNQAKPGDRIVDFCSGGGHVGIVLAHMLPSCQVTLIENKELSLIR 480
ALRKQQQLNNLVYVVTNQAKPGDRIVDFCSGGGHVGIVLAHMLPSCQVTLIENKELSLIR
Sbjct: 421 ALRKQQQLNNLVYVVTNQAKPGDRIVDFCSGGGHVGIVLAHMLPSCQVTLIENKELSLIR 480
Query: 481 AKKRSDELGLSNIWFIQANMEYFTGMFNIGVALHACGVATDMVIEHCIKTRASFVTCPCC 540
AKKRSDELGLSNIWFIQANMEYFTGMFNIGVALHACGVATDMVIEHCIKTRASFVTCPCC
Sbjct: 481 AKKRSDELGLSNIWFIQANMEYFTGMFNIGVALHACGVATDMVIEHCIKTRASFVTCPCC 540
Query: 541 YGFIQNTSKFNFPKSEQFKKTLSYKEHMILCRFADQTAVQLPPQRRLIGKQCMCLVDLDR 600
YGFIQNTSKFNFPKSEQFKKTLSYKEHMILCRFADQTAVQLPPQRRLIGKQCMCLVDLDR
Sbjct: 541 YGFIQNTSKFNFPKSEQFKKTLSYKEHMILCRFADQTAVQLPPQRRLIGKQCMCLVDLDR 600
Query: 601 ARAAEECGYSVQVISMEPESCSPKNNMIVGVPI 633
ARAAEECGYSVQVISMEPESCSPKNNMIVGVPI
Sbjct: 601 ARAAEECGYSVQVISMEPESCSPKNNMIVGVPI 633
>gi|154707916 glutathione S-transferase, C-terminal domain
containing isoform 2 [Homo sapiens]
Length = 546
Score = 1003 bits (2594), Expect = 0.0
Identities = 495/500 (99%), Positives = 495/500 (99%)
Query: 134 KTCLKACAEVSQWTRLCELTIPLAIENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDD 193
K CL EVSQWTRLCELTIPLAIENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDD
Sbjct: 47 KICLVVTKEVSQWTRLCELTIPLAIENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDD 106
Query: 194 KLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPA 253
KLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPA
Sbjct: 107 KLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPA 166
Query: 254 TTNREPSHIRKAKASDLPPLEHVFAEGLYFTLADIVLLPCIHHFLVIISRKFSEKLVEFP 313
TTNREPSHIRKAKASDLPPLEHVFAEGLYFTLADIVLLPCIHHFLVIISRKFSEKLVEFP
Sbjct: 167 TTNREPSHIRKAKASDLPPLEHVFAEGLYFTLADIVLLPCIHHFLVIISRKFSEKLVEFP 226
Query: 314 LLASWYQRIQEVPGVKTAASKCGIQFLHLPKLLTTSTEQHPNLCEVPGVEEQSDPLFIGG 373
LLASWYQRIQEVPGVKTAASKCGIQFLHLPKLLTTSTEQHPNLCEVPGVEEQSDPLFIGG
Sbjct: 227 LLASWYQRIQEVPGVKTAASKCGIQFLHLPKLLTTSTEQHPNLCEVPGVEEQSDPLFIGG 286
Query: 374 PRPTMAKLMEKGIEVMFSPHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVY 433
PRPTMAKLMEKGIEVMFSPHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVY
Sbjct: 287 PRPTMAKLMEKGIEVMFSPHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVY 346
Query: 434 VVTNQAKPGDRIVDFCSGGGHVGIVLAHMLPSCQVTLIENKELSLIRAKKRSDELGLSNI 493
VVTNQAKPGDRIVDFCSGGGHVGIVLAHMLPSCQVTLIENKELSLIRAKKRSDELGLSNI
Sbjct: 347 VVTNQAKPGDRIVDFCSGGGHVGIVLAHMLPSCQVTLIENKELSLIRAKKRSDELGLSNI 406
Query: 494 WFIQANMEYFTGMFNIGVALHACGVATDMVIEHCIKTRASFVTCPCCYGFIQNTSKFNFP 553
WFIQANMEYFTGMFNIGVALHACGVATDMVIEHCIKTRASFVTCPCCYGFIQNTSKFNFP
Sbjct: 407 WFIQANMEYFTGMFNIGVALHACGVATDMVIEHCIKTRASFVTCPCCYGFIQNTSKFNFP 466
Query: 554 KSEQFKKTLSYKEHMILCRFADQTAVQLPPQRRLIGKQCMCLVDLDRARAAEECGYSVQV 613
KSEQFKKTLSYKEHMILCRFADQTAVQLPPQRRLIGKQCMCLVDLDRARAAEECGYSVQV
Sbjct: 467 KSEQFKKTLSYKEHMILCRFADQTAVQLPPQRRLIGKQCMCLVDLDRARAAEECGYSVQV 526
Query: 614 ISMEPESCSPKNNMIVGVPI 633
ISMEPESCSPKNNMIVGVPI
Sbjct: 527 ISMEPESCSPKNNMIVGVPI 546
Score = 122 bits (306), Expect = 1e-27
Identities = 61/85 (71%), Positives = 68/85 (80%)
Query: 1 MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVSRDS 60
MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVS+ +
Sbjct: 1 MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVSQWT 60
Query: 61 SLLRDDLIQDVEIQIISRQELPPIV 85
L + +E + + PP +
Sbjct: 61 RLCELTIPLAIENFLRESSDQPPTI 85
>gi|4758862 eukaryotic translation elongation factor 1 epsilon 1
isoform 1 [Homo sapiens]
Length = 174
Score = 38.1 bits (87), Expect = 0.025
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 274 EHVFAEGLYFTLADIVLLPCIHHFLVIISRKFSEKLVEFPLLASWYQRIQEVPGVK 329
+ V+ G FTLADI+L +H F+V ++ + EK + ++ W+ IQ PG++
Sbjct: 104 DKVYLTGYNFTLADILLYYGLHRFIVDLTVQEKEKYLN---VSRWFCHIQHYPGIR 156
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 33.5 bits (75), Expect = 0.61
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 27/141 (19%)
Query: 166 SDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVHTQE 225
SD T+ + K+ E + ++ + ++ ++QKA+ TKG+ +S V +E
Sbjct: 484 SDDELTVEQRRQSIAKEKEERLLRRQINREKLEEKRKQKAEKTKSSKTKGQGRSSVDLEE 543
Query: 226 TS-EGLDSSS----------KSLELKVAFS----------------KLTVQEEPATTNRE 258
+S + L+ + K LE KVA S K +E+ T +
Sbjct: 544 SSTKSLEPKAARIKEVLKERKVLEKKVALSKKRKKDSRNVEENSKKKQQYEEDSKETLKT 603
Query: 259 PSHIRKAKASDLPPLEHVFAE 279
H K K S L+HV A+
Sbjct: 604 SEHCEKEKISSSKELKHVHAK 624
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 33.1 bits (74), Expect = 0.80
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 392 PHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVYVVTNQAKPGDR----IVD 447
P P TW ++ LP + + +SS ++ Q+ + VY + + + G+R IVD
Sbjct: 16552 PPPTVTWNMNERTLPQEATIETTAISSSMVIKNCQRSHQGVYSLLAKNEAGERKKTIIVD 16611
Query: 448 FCSGGGHVGI-VLAHML--PSCQVT 469
G VG LAH L SC++T
Sbjct: 16612 VLDVPGPVGTPFLAHNLTNESCKLT 16636
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 33.1 bits (74), Expect = 0.80
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 392 PHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVYVVTNQAKPGDR----IVD 447
P P TW ++ LP + + +SS ++ Q+ + VY + + + G+R IVD
Sbjct: 10247 PPPTVTWNMNERTLPQEATIETTAISSSMVIKNCQRSHQGVYSLLAKNEAGERKKTIIVD 10306
Query: 448 FCSGGGHVGI-VLAHML--PSCQVT 469
G VG LAH L SC++T
Sbjct: 10307 VLDVPGPVGTPFLAHNLTNESCKLT 10331
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 33.1 bits (74), Expect = 0.80
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 392 PHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVYVVTNQAKPGDR----IVD 447
P P TW ++ LP + + +SS ++ Q+ + VY + + + G+R IVD
Sbjct: 10180 PPPTVTWNMNERTLPQEATIETTAISSSMVIKNCQRSHQGVYSLLAKNEAGERKKTIIVD 10239
Query: 448 FCSGGGHVGI-VLAHML--PSCQVT 469
G VG LAH L SC++T
Sbjct: 10240 VLDVPGPVGTPFLAHNLTNESCKLT 10264
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 33.1 bits (74), Expect = 0.80
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 392 PHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVYVVTNQAKPGDR----IVD 447
P P TW ++ LP + + +SS ++ Q+ + VY + + + G+R IVD
Sbjct: 10055 PPPTVTWNMNERTLPQEATIETTAISSSMVIKNCQRSHQGVYSLLAKNEAGERKKTIIVD 10114
Query: 448 FCSGGGHVGI-VLAHML--PSCQVT 469
G VG LAH L SC++T
Sbjct: 10115 VLDVPGPVGTPFLAHNLTNESCKLT 10139
>gi|8659574 transcription factor E3 [Homo sapiens]
Length = 575
Score = 33.1 bits (74), Expect = 0.80
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 165 SSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPL 212
S P +P E+L+++ L P R H + RRQ++KQ + +GP L
Sbjct: 165 SRPPPAQVPREVLKVQTHLENPTRYHL-QQARRQQVKQYLSTTLGPKL 211
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 32.7 bits (73), Expect = 1.0
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 9/121 (7%)
Query: 122 LKKELLELLGFKKTCLKACAEVSQWTRLCELTIPLAIENFLRESSDQPPTIPVEILQLEK 181
L L LLG + + W + CE + E L ++ P + E L K
Sbjct: 2425 LGSHLNMLLGQYHQFQNSADSLQAWMQACEANV----EKLLSDTVASDPGVLQEQLATTK 2480
Query: 182 KLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKV 241
+L E + H + QK+ + + G P A H QET++ + S +SL +
Sbjct: 2481 QLQEELAEHQVPVEKLQKVARDIMEIEGEP-----APDHRHVQETTDSILSHFQSLSYSL 2535
Query: 242 A 242
A
Sbjct: 2536 A 2536
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 32.7 bits (73), Expect = 1.0
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 9/121 (7%)
Query: 122 LKKELLELLGFKKTCLKACAEVSQWTRLCELTIPLAIENFLRESSDQPPTIPVEILQLEK 181
L L LLG + + W + CE + E L ++ P + E L K
Sbjct: 1923 LGSHLNMLLGQYHQFQNSADSLQAWMQACEANV----EKLLSDTVASDPGVLQEQLATTK 1978
Query: 182 KLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKV 241
+L E + H + QK+ + + G P A H QET++ + S +SL +
Sbjct: 1979 QLQEELAEHQVPVEKLQKVARDIMEIEGEP-----APDHRHVQETTDSILSHFQSLSYSL 2033
Query: 242 A 242
A
Sbjct: 2034 A 2034
>gi|9966827 PEST proteolytic signal containing nuclear protein [Homo
sapiens]
Length = 178
Score = 32.0 bits (71), Expect = 1.8
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 201 KQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPATTNREPS 260
K Q+A G P + + K T +S G +SSS+S E K + +EE A +P+
Sbjct: 13 KSQRAGAAGGPEEEAEKPVKTKTVSSSNGGESSSRSAE------KRSAEEEAADLPTKPT 66
Query: 261 HIRK 264
I K
Sbjct: 67 KISK 70
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein
[Homo sapiens]
Length = 3969
Score = 31.2 bits (69), Expect = 3.0
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 193 DKLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEP 252
DK++++ K + PP G H ++ SE L +K LK ++ P
Sbjct: 208 DKIKKKDSKSIEKKRGRPPTFPGVKIKITHGKDISE-LPKGNKEDSLK------KIKRTP 260
Query: 253 ATTNREPSHIRKAKASDLPPLEHVFAEG 280
+ T ++ + I+K +A L PL+ F G
Sbjct: 261 SATFQQATKIKKLRAGKLSPLKSKFKTG 288
>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
sapiens]
Length = 1094
Score = 30.8 bits (68), Expect = 4.0
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 25/137 (18%)
Query: 44 KIFKICLVVTKEVSRDSSLLR-----------DDLIQDVEIQIISRQELPPIVQNCCLPA 92
K+ + LV E +D +LL + LI+ ++++S +P IV L A
Sbjct: 96 KLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMML-A 154
Query: 93 VVERSDNFCRAGLAVVLR----HIIQKSYEADPLKKELL----ELLGFKKTCLKACAEVS 144
+ E S A L+ +R H IQK Y DP +KE+L E L K+ L A + V
Sbjct: 155 IKEAS-----ADLSPYVRKNAAHAIQKLYSLDPEQKEMLIEVIEKLLKDKSTLVAGSVVM 209
Query: 145 QWTRLCELTIPLAIENF 161
+ +C I L +N+
Sbjct: 210 AFEEVCPDRIDLIHKNY 226
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 30.8 bits (68), Expect = 4.0
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 11/185 (5%)
Query: 92 AVVERSDNFCRAGLAVVLRHIIQKSYEADPLKKELLELLGFKKTCLKAC----AEVSQWT 147
A VER + + LAV R ++ E + LK ++ K+ +K A++ +
Sbjct: 1626 AEVERDEERKQRTLAVAARKKLEG--ELEELKAQMASAGQGKEEAVKQLRKMQAQMKELW 1683
Query: 148 RLCELTIPLAIENFL--RESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKA 205
R E T E F RES + + E+L+L+++L+ R + R ++ + A
Sbjct: 1684 REVEETRTSREEIFSQNRESEKRLKGLEAEVLRLQEELAASDRARRQAQQDRDEMADEVA 1743
Query: 206 DG--VGPPLTKGKAKSKVHTQETSEGLDSSSKSLE-LKVAFSKLTVQEEPATTNREPSHI 262
+G + + K + + + E L+ + E L + KL +Q E TT
Sbjct: 1744 NGNLSKAAILEEKRQLEGRLGQLEEELEEEQSNSELLNDRYRKLLLQVESLTTELSAERS 1803
Query: 263 RKAKA 267
AKA
Sbjct: 1804 FSAKA 1808
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 30.8 bits (68), Expect = 4.0
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 11/185 (5%)
Query: 92 AVVERSDNFCRAGLAVVLRHIIQKSYEADPLKKELLELLGFKKTCLKAC----AEVSQWT 147
A VER + + LAV R ++ E + LK ++ K+ +K A++ +
Sbjct: 1618 AEVERDEERKQRTLAVAARKKLEG--ELEELKAQMASAGQGKEEAVKQLRKMQAQMKELW 1675
Query: 148 RLCELTIPLAIENFL--RESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKA 205
R E T E F RES + + E+L+L+++L+ R + R ++ + A
Sbjct: 1676 REVEETRTSREEIFSQNRESEKRLKGLEAEVLRLQEELAASDRARRQAQQDRDEMADEVA 1735
Query: 206 DG--VGPPLTKGKAKSKVHTQETSEGLDSSSKSLE-LKVAFSKLTVQEEPATTNREPSHI 262
+G + + K + + + E L+ + E L + KL +Q E TT
Sbjct: 1736 NGNLSKAAILEEKRQLEGRLGQLEEELEEEQSNSELLNDRYRKLLLQVESLTTELSAERS 1795
Query: 263 RKAKA 267
AKA
Sbjct: 1796 FSAKA 1800
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 30.8 bits (68), Expect = 4.0
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 11/185 (5%)
Query: 92 AVVERSDNFCRAGLAVVLRHIIQKSYEADPLKKELLELLGFKKTCLKAC----AEVSQWT 147
A VER + + LAV R ++ E + LK ++ K+ +K A++ +
Sbjct: 1659 AEVERDEERKQRTLAVAARKKLEG--ELEELKAQMASAGQGKEEAVKQLRKMQAQMKELW 1716
Query: 148 RLCELTIPLAIENFL--RESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKA 205
R E T E F RES + + E+L+L+++L+ R + R ++ + A
Sbjct: 1717 REVEETRTSREEIFSQNRESEKRLKGLEAEVLRLQEELAASDRARRQAQQDRDEMADEVA 1776
Query: 206 DG--VGPPLTKGKAKSKVHTQETSEGLDSSSKSLE-LKVAFSKLTVQEEPATTNREPSHI 262
+G + + K + + + E L+ + E L + KL +Q E TT
Sbjct: 1777 NGNLSKAAILEEKRQLEGRLGQLEEELEEEQSNSELLNDRYRKLLLQVESLTTELSAERS 1836
Query: 263 RKAKA 267
AKA
Sbjct: 1837 FSAKA 1841
>gi|90669307 cyclin B3 isoform 3 [Homo sapiens]
Length = 1395
Score = 30.8 bits (68), Expect = 4.0
Identities = 57/242 (23%), Positives = 97/242 (40%), Gaps = 30/242 (12%)
Query: 1 MKAIKKSLTEEEYLYLDFS-----HQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKE 55
M +IKK TE+E L+ + S H TE + L S+ L ++ + + K L K+
Sbjct: 313 MSSIKKPTTEKETLFQELSVLQEKHTTEHEMSILKKSLALQKTNFKEDSLVKESLAFKKK 372
Query: 56 VSRDSSLLRDDLIQDVEIQIISRQELPPIVQNCCLPAVVERSDNFCRAGLAVVLRHIIQK 115
S + +++ ++++ + R L P+V L + + L++ + +K
Sbjct: 373 PSTEEAIMMPVILKEQCMTEGKRSRLKPLV----LQEITSGEKSLIMKPLSIKEKPSTEK 428
Query: 116 ---SYEADPLKK-----ELLELLGFKKTCLKACAEVSQWTRLCELTIPLAIENFLRESSD 167
S E L+K E + +L + LK+ E S + T IE +
Sbjct: 429 ESFSQEPSALQKKHTTQEEVSILKEPSSLLKSPTEESPFDEALAFTKKCTIE-------E 481
Query: 168 QPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPL----TKGKAKSKVHT 223
PPT IL+ K ++ H L Q +K+ + PL K K K T
Sbjct: 482 APPTKKPLILK-RKHATQGTMSHLKKPLILQTTSGEKS-LIKEPLPFKEEKVSLKKKCTT 539
Query: 224 QE 225
QE
Sbjct: 540 QE 541
>gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens]
Length = 1910
Score = 30.8 bits (68), Expect = 4.0
Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 25/132 (18%)
Query: 158 IENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKA 217
+ +F ++ SDQ PV+ ++ K L L ++ + P KG A
Sbjct: 1043 VHSFQQDKSDQRENSPVQSIRSPKSL----------------LFGAMSEMISPS-EKGSA 1085
Query: 218 KSKVHTQETSE-----GLDSSSKSLELKVAFSKLT---VQEEPATTNREPSHIRKAKASD 269
+ K ++ T + + KS + ++FSK T + P T P ++K+ A
Sbjct: 1086 RMKKRSRNTLDSEVPAAYQTPKKSHQKSLSFSKTTPRRISHTPQTPLYTPERLQKSPAKM 1145
Query: 270 LPPLEHVFAEGL 281
P + F E L
Sbjct: 1146 TPTKQAAFKESL 1157
>gi|62177127 myosin heavy chain Myr 8 [Homo sapiens]
Length = 1858
Score = 30.8 bits (68), Expect = 4.0
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 165 SSDQPPTIPVEILQL---EKKLSEPVRVHNDDKLRRQKLKQQKADGVGP 210
+SD+ P P+E+ +L E L PV+ L Q K QK DG P
Sbjct: 1505 ASDESPLTPLEVKKLPVLETNLKYPVQPEGSSPLSPQYSKSQKGDGDRP 1553
>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
sapiens]
Length = 1082
Score = 30.4 bits (67), Expect = 5.2
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Query: 191 NDDKLRRQKLKQQKADGVGPPLTKGKAKSKV-----HTQETSEGLDSSSKSLELKVAFSK 245
+++K R + +Q + DG K K K KV + EG DSSS S E ++
Sbjct: 726 DEEKGRGSESEQSEEDG------KRKTKKKVPERKGEASSSDEGSDSSSSSSESEMTSES 779
Query: 246 LTVQEEPATTNRE-PSHIRKAKAS 268
Q EPA+ +R+ P + A A+
Sbjct: 780 EEEQLEPASWSRKTPPSSKSAPAT 803
>gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo
sapiens]
Length = 2155
Score = 30.4 bits (67), Expect = 5.2
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 43 CKIFKICLVVTKEVSRDSSLLRDDLI--QDVEIQIISRQELPPIVQNCCL---------P 91
C+ ++ LV T + R S++RD ++ +DV I+ I QE P V + L
Sbjct: 1887 CESRRVRLVDTGDKFRFFSMVRDLMLWMEDV-IRQIEAQEKPRDVSSVELLMNNHQGIKA 1945
Query: 92 AVVERSDNFCRAGLAVVLRHIIQKSYEADPLKKELLELLGFKKTCLKACAEVSQWTRLCE 151
+ R+D+F + + + +K Y ++ +K++LL+L +K + + +W RL
Sbjct: 1946 EIDARNDSFTTC-IELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLI- 2003
Query: 152 LTIPLAIENFLRESS 166
L + F R++S
Sbjct: 2004 ----LEVHQFSRDAS 2014
>gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo
sapiens]
Length = 2364
Score = 30.4 bits (67), Expect = 5.2
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 43 CKIFKICLVVTKEVSRDSSLLRDDLI--QDVEIQIISRQELPPIVQNCCL---------P 91
C+ ++ LV T + R S++RD ++ +DV I+ I QE P V + L
Sbjct: 1900 CESRRVRLVDTGDKFRFFSMVRDLMLWMEDV-IRQIEAQEKPRDVSSVELLMNNHQGIKA 1958
Query: 92 AVVERSDNFCRAGLAVVLRHIIQKSYEADPLKKELLELLGFKKTCLKACAEVSQWTRLCE 151
+ R+D+F + + + +K Y ++ +K++LL+L +K + + +W RL
Sbjct: 1959 EIDARNDSFTTC-IELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLI- 2016
Query: 152 LTIPLAIENFLRESS 166
L + F R++S
Sbjct: 2017 ----LEVHQFSRDAS 2027
>gi|51479173 dynein, axonemal, heavy chain 11 [Homo sapiens]
Length = 4523
Score = 30.4 bits (67), Expect = 5.2
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 398 WTLDWNVLPAAVSPKEGKMSSDRALRKQQ--QLNNLVYVVTNQAKPGDR--IVDFCSGGG 453
WT D + + + +EG ++ + K+Q QLN L+ ++ + PGDR I+ C+
Sbjct: 1755 WTTDVGIAFSRL--EEGYETALKDFHKKQISQLNTLITLLLGELPPGDRQKIMTICTIDV 1812
Query: 454 HVGIVLAHMLPSCQVTL 470
H V+A ++ QV +
Sbjct: 1813 HARDVVAKLISQKQVVV 1829
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 30.4 bits (67), Expect = 5.2
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 163 RESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVH 222
+ + + T PV+ +++K S+ V+ +KL ++ K +K + PL K K
Sbjct: 1060 KSAKEHQETKPVKEEKVKKDYSKDVK---SEKLTTKEEKAKKPNEKNKPLDNKGEKRKRK 1116
Query: 223 TQETSEGLDSSSKSLELKVAFSKLTVQE 250
T+E +G+D +S +K+ SKL V E
Sbjct: 1117 TEE--KGVDKDFESSSMKI--SKLEVTE 1140
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 30.4 bits (67), Expect = 5.2
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 163 RESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVH 222
+ + + T PV+ +++K S+ V+ +KL ++ K +K + PL K K
Sbjct: 1094 KSAKEHQETKPVKEEKVKKDYSKDVK---SEKLTTKEEKAKKPNEKNKPLDNKGEKRKRK 1150
Query: 223 TQETSEGLDSSSKSLELKVAFSKLTVQE 250
T+E +G+D +S +K+ SKL V E
Sbjct: 1151 TEE--KGVDKDFESSSMKI--SKLEVTE 1174
>gi|87162461 fragile X mental retardation 2 [Homo sapiens]
Length = 1311
Score = 30.0 bits (66), Expect = 6.8
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Query: 158 IENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTK--- 214
+E+ L+ SSD+ PV+ L + +E + K R + A PP +
Sbjct: 423 LEDDLKLSSDEDDLEPVKTLTTQCTATELYQAVEKAKPRNNPVNPPLATPQPPPAVQASG 482
Query: 215 --GKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPATTNR 257
G + + E+ +SS+ E A T + EP +TN+
Sbjct: 483 GSGSSSESESSSESDSDTESSTTDSESNEAPRVATPEPEPPSTNK 527
>gi|119703749 hydrocephalus inducing isoform a [Homo sapiens]
Length = 5120
Score = 30.0 bits (66), Expect = 6.8
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 151 ELTIPLAIENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDDKL-RRQKLKQQKADGVG 209
+LT I+ LRE + + +Q +K E R +D+L RR K +Q
Sbjct: 2314 KLTFDRGIQQALRERKKREQERLAKEMQEKKLQQELERQKEEDELKRRVKKGKQGPIKEE 2373
Query: 210 PPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEE 251
PP+ K +A +K T +D +++E K++ + T+ E+
Sbjct: 2374 PPMKKSQAANKQVPPLTK--VDVKMETIERKISVREQTMSEK 2413
>gi|16306580 F-box and leucine-rich repeat protein 11 [Homo sapiens]
Length = 1162
Score = 29.6 bits (65), Expect = 8.8
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 123 KKELLELLGFKKTCLKACAEVSQWTRL----CELTIPLAIENFLRESSDQPPTIPVEILQ 178
++EL E + KT K C + WT++ C+ +P A+ ++ QP ++ +
Sbjct: 907 RRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKR---QPVSLDLSWTN 963
Query: 179 LEKK 182
+ KK
Sbjct: 964 ISKK 967
>gi|239751532 PREDICTED: similar to vacuolar protein sorting 53
(yeast) (predicted) [Homo sapiens]
Length = 188
Score = 29.6 bits (65), Expect = 8.8
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 252 PATTNREPSHIRKAKASDLPPLEHVFAEGLY---FTLADIVLLPCIHHFLVIISRKFSEK 308
P RE HI F +G+ + LA++V P LV++ + +
Sbjct: 10 PKLLEREQRHISSPGLPSGIAAPDPFGKGIQRCRWLLAEVVTAP--QELLVVLVDNYIKL 67
Query: 309 LVEFPLLASWYQRIQEVPGVKTAASKCGIQFLHLP-KLLTTSTEQHPNLCEVPGVEEQ 365
+ A +++I ++ G+K ++FLHLP +L E +L +P EQ
Sbjct: 68 FTDCNTEA--FRKILDMKGMKRNKQSSMLEFLHLPLPMLPLGVESSSSLSLMPPTPEQ 123
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,757,997
Number of Sequences: 37866
Number of extensions: 1105976
Number of successful extensions: 2863
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2841
Number of HSP's gapped (non-prelim): 49
length of query: 633
length of database: 18,247,518
effective HSP length: 108
effective length of query: 525
effective length of database: 14,157,990
effective search space: 7432944750
effective search space used: 7432944750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.