PCNP 37837

Name: PCNP	Sequence: fasta or formatted (178aa)		NCBI GI: 9966827
Description: PEST proteolytic signal containing nuclear protein		Referenced in: Ring Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.7 19 3 C cysteine 0.0 0 0 D aspartate 5.1 9 1 E glutamate 10.7 19 3 F phenylalanine 2.8 5 1 G glycine 8.4 15 2 H histidine 1.7 3 1 I isoleucine 3.4 6 1 K lysine 12.4 22 2 L leucine 3.4 6 1 M methionine 2.2 4 1 N asparagine 5.1 9 1 P proline 7.3 13 2 Q glutamine 2.2 4 1 R arginine 3.4 6 1 S serine 11.8 21 3 T threonine 6.2 11 2 V valine 2.8 5 1 W tryptophan 0.6 1 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PEST proteolytic signal containing nuclear protein [H... RBM25 0.052 RNA binding motif protein 25 AIM1 0.042 absent in melanoma 1 ATRX 0.042 transcriptional regulator ATRX isoform 2 ATRX 0.042 transcriptional regulator ATRX isoform 1 NOLC1 0.039 nucleolar and coiled-body phosphoprotein 1 ZMYND8 0.036 zinc finger, MYND-type containing 8 isoform a CAST 0.036 calpastatin isoform k CAST 0.036 calpastatin isoform h CAST 0.036 calpastatin isoform e CAST 0.036 calpastatin isoform b CAST 0.036 calpastatin isoform i CAST 0.036 calpastatin isoform a TRIP12 0.036 thyroid hormone receptor interactor 12 NEFH 0.033 neurofilament, heavy polypeptide 200kDa C4orf8 0.033 hypothetical protein LOC8603 TRIO 0.033 triple functional domain (PTPRF interacting) TCEAL4 0.030 transcription elongation factor A (SII)-like 4 [Homo... TCEAL4 0.030 transcription elongation factor A (SII)-like 4 [Homo... TCEAL4 0.030 transcription elongation factor A (SII)-like 4 [Homo... TCEAL2 0.030 transcription elongation factor A (SII)-like 2 [Homo... TCEAL4 0.030 transcription elongation factor A (SII)-like 4 [Homo... KIAA0754 0.030 hypothetical protein LOC643314 TOP2B 0.030 DNA topoisomerase II, beta isozyme OTX1 0.030 orthodenticle homeobox 1 THOC2 0.027 THO complex 2 MLLT3 0.027 myeloid/lymphoid or mixed-lineage leukemia (trithor... SETD1A 0.027 SET domain containing 1A AFF1 0.027 myeloid/lymphoid or mixed-lineage leukemia trithorax ... FLJ37078 0.027 hypothetical protein LOC222183 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.