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Search of human proteins with 149363702
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149363702 hypothetical protein LOC445577 [Homo sapiens]
(196 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149363702 hypothetical protein LOC445577 [Homo sapiens] 421 e-118
gi|39652628 oxidative stress-associated Src activator [Homo sapi... 254 3e-68
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 39 0.002
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 39 0.002
gi|130502140 NEZHA isoform 2 [Homo sapiens] 37 0.011
gi|122937255 NEZHA isoform 1 [Homo sapiens] 37 0.011
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 37 0.011
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 37 0.014
gi|150170670 piccolo isoform 2 [Homo sapiens] 37 0.014
gi|150378539 piccolo isoform 1 [Homo sapiens] 37 0.014
gi|208022661 hypothetical protein LOC57701 [Homo sapiens] 36 0.018
gi|28559039 mediator complex subunit 1 [Homo sapiens] 36 0.024
gi|213688346 XG glycoprotein isoform 2 precursor [Homo sapiens] 36 0.024
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 36 0.024
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 36 0.024
gi|4557853 transcription factor SOX9 [Homo sapiens] 35 0.031
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 35 0.031
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 35 0.031
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 35 0.031
gi|56682953 epidermal growth factor receptor pathway substrate 8... 35 0.041
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 35 0.041
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 35 0.041
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 35 0.041
gi|91208420 bassoon protein [Homo sapiens] 35 0.053
gi|4557317 annexin A11 [Homo sapiens] 35 0.053
gi|22165433 annexin A11 [Homo sapiens] 35 0.053
gi|22165431 annexin A11 [Homo sapiens] 35 0.053
gi|92091600 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... 34 0.070
gi|7019549 T-box 21 [Homo sapiens] 34 0.091
gi|56549696 E1A binding protein p400 [Homo sapiens] 34 0.091
>gi|149363702 hypothetical protein LOC445577 [Homo sapiens]
Length = 196
Score = 421 bits (1081), Expect = e-118
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MPGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKN 60
MPGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKN
Sbjct: 1 MPGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKN 60
Query: 61 LTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSGGA 120
LTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSGGA
Sbjct: 61 LTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSGGA 120
Query: 121 TKYTIYWGFRATDHHVQGRDSQARGTAAHWHGGHVCSPNVFWRISHGPAQQLTFPTEQAA 180
TKYTIYWGFRATDHHVQGRDSQARGTAAHWHGGHVCSPNVFWRISHGPAQQLTFPTEQAA
Sbjct: 121 TKYTIYWGFRATDHHVQGRDSQARGTAAHWHGGHVCSPNVFWRISHGPAQQLTFPTEQAA 180
Query: 181 PPVCPAPASRRLSAPG 196
PPVCPAPASRRLSAPG
Sbjct: 181 PPVCPAPASRRLSAPG 196
>gi|39652628 oxidative stress-associated Src activator [Homo
sapiens]
Length = 1118
Score = 254 bits (650), Expect = 3e-68
Identities = 127/147 (86%), Positives = 130/147 (88%), Gaps = 5/147 (3%)
Query: 1 MPGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKN 60
MPGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKN
Sbjct: 352 MPGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKN 411
Query: 61 LTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSGGA 120
LTEQNSYSNIPHEGKHTPLYERS PINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSGGA
Sbjct: 412 LTEQNSYSNIPHEGKHTPLYERSSPINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSGGA 471
Query: 121 TKYTI--YWGFRATDHHVQGRDSQARG 145
T + G+ T H + QARG
Sbjct: 472 TNHISGNKIGWEKTGSH---SEPQARG 495
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 39.3 bits (90), Expect = 0.002
Identities = 46/194 (23%), Positives = 75/194 (38%), Gaps = 13/194 (6%)
Query: 3 GMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNLT 62
G + P P Q L P ++ +PQV +P P + YP + + PA TSG T
Sbjct: 1463 GYLSPKPPSQQLGSPYRPHHSQ--SPQVGTPQREPQRNFYPAAQNLPANTQQATSGTLFT 1520
Query: 63 EQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSSSDN-DEGSGGAT 121
+ S + ++ ++SL P S+Y+ S++ N ++ G +
Sbjct: 1521 QTPSGQS---SATYSQFNQQSLNSTAPPPPPPPPPSSSYYQNQQPSANFQNYNQLKGSLS 1577
Query: 122 KYTIYWGFRATDHHVQGRDSQARGTAAHWHGGHVCSPNVFWRISHGPAQQLTFPTEQAAP 181
+ T++ + + G SQ H GH P+ I H A + P P
Sbjct: 1578 QQTVFTS--GPNQALPGTTSQQTVPGHHVTPGHFL-PSQNPTIHHQTAAAVVPP----PP 1630
Query: 182 PVCPAPASRRLSAP 195
P PAP + P
Sbjct: 1631 PPPPAPGPHLVQQP 1644
Score = 30.8 bits (68), Expect = 0.77
Identities = 40/155 (25%), Positives = 54/155 (34%), Gaps = 30/155 (19%)
Query: 2 PGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNL 61
PG P H PP P T LQ Q P P P P ++ SG +
Sbjct: 1684 PGPAPHHHPPPH---PSTGLQGLQAQHQHVVNSAPPPPPP-------PPPSSVLASGHHT 1733
Query: 62 TEQNSYSNIPHEGKHTPLYERS----LPINPAQS-------GSPNHVDSAYFP------- 103
T + + PH+G PL+ S +P P+Q+ P H S P
Sbjct: 1734 TSAQALHHPPHQG--PPLFPSSAHPTVPPYPSQATHHTTLGPGPQHQPSGTGPHCPLPVT 1791
Query: 104 GSSTSSSSDNDEGSGGATKYTIYWGFRATDHHVQG 138
G N + A+ + + G A H VQG
Sbjct: 1792 GPHLQPQGPNSIPTPTASGFCPHPGSVALPHGVQG 1826
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 39.3 bits (90), Expect = 0.002
Identities = 46/194 (23%), Positives = 75/194 (38%), Gaps = 13/194 (6%)
Query: 3 GMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNLT 62
G + P P Q L P ++ +PQV +P P + YP + + PA TSG T
Sbjct: 1463 GYLSPKPPSQQLGSPYRPHHSQ--SPQVGTPQREPQRNFYPAAQNLPANTQQATSGTLFT 1520
Query: 63 EQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSSSDN-DEGSGGAT 121
+ S + ++ ++SL P S+Y+ S++ N ++ G +
Sbjct: 1521 QTPSGQS---SATYSQFNQQSLNSTAPPPPPPPPPSSSYYQNQQPSANFQNYNQLKGSLS 1577
Query: 122 KYTIYWGFRATDHHVQGRDSQARGTAAHWHGGHVCSPNVFWRISHGPAQQLTFPTEQAAP 181
+ T++ + + G SQ H GH P+ I H A + P P
Sbjct: 1578 QQTVFTS--GPNQALPGTTSQQTVPGHHVTPGHFL-PSQNPTIHHQTAAAVVPP----PP 1630
Query: 182 PVCPAPASRRLSAP 195
P PAP + P
Sbjct: 1631 PPPPAPGPHLVQQP 1644
Score = 30.8 bits (68), Expect = 0.77
Identities = 40/155 (25%), Positives = 54/155 (34%), Gaps = 30/155 (19%)
Query: 2 PGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNL 61
PG P H PP P T LQ Q P P P P ++ SG +
Sbjct: 1684 PGPAPHHHPPPH---PSTGLQGLQAQHQHVVNSAPPPPPP-------PPPSSVLASGHHT 1733
Query: 62 TEQNSYSNIPHEGKHTPLYERS----LPINPAQS-------GSPNHVDSAYFP------- 103
T + + PH+G PL+ S +P P+Q+ P H S P
Sbjct: 1734 TSAQALHHPPHQG--PPLFPSSAHPTVPPYPSQATHHTTLGPGPQHQPSGTGPHCPLPVT 1791
Query: 104 GSSTSSSSDNDEGSGGATKYTIYWGFRATDHHVQG 138
G N + A+ + + G A H VQG
Sbjct: 1792 GPHLQPQGPNSIPTPTASGFCPHPGSVALPHGVQG 1826
>gi|130502140 NEZHA isoform 2 [Homo sapiens]
Length = 1249
Score = 37.0 bits (84), Expect = 0.011
Identities = 39/137 (28%), Positives = 53/137 (38%), Gaps = 28/137 (20%)
Query: 2 PGMVPPHVPPQMLNIPQTSLQAKPVAP----QVP----SPGGAPGQGPYPYSLSEPAPLT 53
PG PP P IP + K +P +VP SPG P Q P + PA L
Sbjct: 734 PGSAPP---PAAWVIPGPTTGPKAASPSPARRVPATRRSPGPGPSQSPRSPKHTRPAELR 790
Query: 54 LDTSGKNLTEQNSYSNIPHEGKHTP------------LYERSLPINPAQSGSPNHVDSAY 101
L + LT + ++PH K +P L E + P PA P ++
Sbjct: 791 LAPLTRVLTPPHDVDSLPHLRKFSPSQVPVQTRSSILLAEETPPEEPA--ARPGLIE--- 845
Query: 102 FPGSSTSSSSDNDEGSG 118
P S + + DEG G
Sbjct: 846 IPLGSLADPAAEDEGDG 862
>gi|122937255 NEZHA isoform 1 [Homo sapiens]
Length = 1276
Score = 37.0 bits (84), Expect = 0.011
Identities = 39/137 (28%), Positives = 53/137 (38%), Gaps = 28/137 (20%)
Query: 2 PGMVPPHVPPQMLNIPQTSLQAKPVAP----QVP----SPGGAPGQGPYPYSLSEPAPLT 53
PG PP P IP + K +P +VP SPG P Q P + PA L
Sbjct: 761 PGSAPP---PAAWVIPGPTTGPKAASPSPARRVPATRRSPGPGPSQSPRSPKHTRPAELR 817
Query: 54 LDTSGKNLTEQNSYSNIPHEGKHTP------------LYERSLPINPAQSGSPNHVDSAY 101
L + LT + ++PH K +P L E + P PA P ++
Sbjct: 818 LAPLTRVLTPPHDVDSLPHLRKFSPSQVPVQTRSSILLAEETPPEEPA--ARPGLIE--- 872
Query: 102 FPGSSTSSSSDNDEGSG 118
P S + + DEG G
Sbjct: 873 IPLGSLADPAAEDEGDG 889
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 37.0 bits (84), Expect = 0.011
Identities = 32/108 (29%), Positives = 39/108 (36%), Gaps = 17/108 (15%)
Query: 2 PGMVPPHVPP-------QMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTL 54
P PPH PP Q P +KPV Q P P APG G P + S P T
Sbjct: 79 PQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGP--APGVGSAPPASSSAPPATP 136
Query: 55 DTS--------GKNLTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSP 94
TS G T + ++ P +P P Q+G P
Sbjct: 137 PTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGP 184
Score = 32.7 bits (73), Expect = 0.20
Identities = 35/132 (26%), Positives = 42/132 (31%), Gaps = 32/132 (24%)
Query: 2 PGMVPPHVPPQMLNIPQTSLQA---KPVAPQVPSPGGAPGQGPYP------YSLSEPAPL 52
P PP PP +P T QA P VP PG P QGP P P P
Sbjct: 161 PPGAPPPTPPSS-GVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKP- 218
Query: 53 TLDTSGKNLTEQNSYSNIPHEG--------KHTPLYERSLPINPAQSGSPNHVDSAYFPG 104
G L+ + PH G +H P Y + P G PG
Sbjct: 219 ---GGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGG----------PG 265
Query: 105 SSTSSSSDNDEG 116
+ + EG
Sbjct: 266 GRSEEKISDSEG 277
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 36.6 bits (83), Expect = 0.014
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 6 PPHVPPQMLNIPQTSLQAKPVAPQV----PSPGGAPGQGPYPY-----SLSEPAPLTLDT 56
PP++PPQ ++P Q P+ PQ+ P P AP GP+ + + P TL
Sbjct: 1280 PPYLPPQQPSLPPPPQQPPPL-PQLGSIPPPPASAPPVGPHRHFHAHGPVPGPQHYTLGR 1338
Query: 57 SGKNLTE-QNSYSNIPHEGKHTPLYERSLPINPAQSGSPNH 96
G+ + G+H PL++ + P+ P S +P H
Sbjct: 1339 PGRAPRRGAGGHPQFAPHGRH-PLHQPTSPL-PLYSPAPQH 1377
Score = 30.0 bits (66), Expect = 1.3
Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
Query: 22 QAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNLTEQNSYSNIPHEGKHTPLYE 81
Q P A PG P G Y + +PL+ + + SY +P HTP
Sbjct: 1395 QMMPAAGAAGGPGSRPPGGSYSHPHHPQSPLSPHSP---IPPHPSYPPLPPPSPHTP--- 1448
Query: 82 RSLPINPAQSGSPNHVDSAYFPGSSTSSSSD 112
P+ P P H PG++ S++
Sbjct: 1449 -HSPLPPTSPHGPLHASGP--PGTANPPSAN 1476
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 36.6 bits (83), Expect = 0.014
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 21/121 (17%)
Query: 6 PPHVPPQMLNIP------------QTSLQAKPVAPQVPSPGGAPGQ-GPYPYSLSEPAPL 52
PP VPP+ +IP + + KPV PQ+P+ P P P LS + +
Sbjct: 2483 PPPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGLSLTSSM 2542
Query: 53 TLD--TSGKNLTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSS 110
TL+ TS + PH K +P + +SL P+ PG+ T SS
Sbjct: 2543 TLNLVTSADYKLPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSE------PGTPTDSS 2596
Query: 111 S 111
+
Sbjct: 2597 A 2597
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 36.6 bits (83), Expect = 0.014
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 21/121 (17%)
Query: 6 PPHVPPQMLNIP------------QTSLQAKPVAPQVPSPGGAPGQ-GPYPYSLSEPAPL 52
PP VPP+ +IP + + KPV PQ+P+ P P P LS + +
Sbjct: 2483 PPPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGLSLTSSM 2542
Query: 53 TLD--TSGKNLTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSS 110
TL+ TS + PH K +P + +SL P+ PG+ T SS
Sbjct: 2543 TLNLVTSADYKLPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSE------PGTPTDSS 2596
Query: 111 S 111
+
Sbjct: 2597 A 2597
>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
Length = 1334
Score = 36.2 bits (82), Expect = 0.018
Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 12/79 (15%)
Query: 2 PGMVPPHVPPQMLNIPQTSLQAKPVAPQV-PSPGGAPGQG-PYPYSLSEPAPLTLDTSGK 59
P PP P Q+ PQ +L+ P AP+V SPG P P Y P +LD +G
Sbjct: 570 PSPEPPPSPLQVPTYPQLTLEV-PQAPEVLRSPGVPPSPCLPESYPYGSPQEKSLDKAG- 627
Query: 60 NLTEQNSYSNIPHEGKHTP 78
S PH G+ TP
Sbjct: 628 --------SESPHPGRRTP 638
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 35.8 bits (81), Expect = 0.024
Identities = 46/191 (24%), Positives = 73/191 (38%), Gaps = 31/191 (16%)
Query: 2 PGMVPPHVPPQMLNIPQ-TSLQAKPVA-PQVPSPGGAPGQGPYPY-SLSEPAPLTLDTSG 58
PG+ P +P + IP+ T + KP + Q S G G + S S + + TSG
Sbjct: 1053 PGVATPPIPKITIQIPKGTVMVGKPSSHSQYTSSGSVSSSGSKSHHSHSSSSSSSASTSG 1112
Query: 59 KNLTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSG 118
K + ++ EG + S+ + SGS S SS S GS
Sbjct: 1113 KMKSSKS-------EGSSSSKLSSSMYSSQGSSGSSQ---------SKNSSQSGGKPGSS 1156
Query: 119 GATKYTIYWGFRATDHHVQGRDSQARGTAAHWHGGHVCSPNVFWRISHGPAQQLTFPTEQ 178
TK+ + G +T QG+ S + + PN+ S P +++
Sbjct: 1157 PITKHGLSSGSSSTKMKPQGKPSSLMNPS-------LSKPNISPSHSRPPG-----GSDK 1204
Query: 179 AAPPVCPAPAS 189
A P+ P P +
Sbjct: 1205 LASPMKPVPGT 1215
>gi|213688346 XG glycoprotein isoform 2 precursor [Homo sapiens]
Length = 195
Score = 35.8 bits (81), Expect = 0.024
Identities = 33/128 (25%), Positives = 45/128 (35%), Gaps = 20/128 (15%)
Query: 11 PQMLNIPQTSLQAKPVAPQVPSPGGAPGQG---PYPYSLSEPAPLTLDTSGKNLTEQNSY 67
P+ P + + KP P P P G P P +P P SG + +
Sbjct: 34 PEPTKKPNSDIYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGYFNDVDR- 92
Query: 68 SNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSGGATKYTIYW 127
+G++ P R P PA G G S+ +SDN G GG + Y
Sbjct: 93 ----DDGRYPP---RPRPRPPAGGGGG---------GYSSYGNSDNTHGRGGYRLNSRYG 136
Query: 128 GFRATDHH 135
DHH
Sbjct: 137 NTYGGDHH 144
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 35.8 bits (81), Expect = 0.024
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 6 PPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNL 61
PP VP + + S+ A + VP P AP GP P S PAPL++ S L
Sbjct: 262 PPSVPTLISDSNPLSVSASVL---VPVPASAPPSGPVPLSAPAPAPLSVPVSAPPL 314
Score = 28.5 bits (62), Expect = 3.8
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 9/46 (19%)
Query: 5 VPPHVP---------PQMLNIPQTSLQAKPVAPQVPSPGGAPGQGP 41
VPP P P + +P ++ A P P VP P P GP
Sbjct: 321 VPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGP 366
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 35.8 bits (81), Expect = 0.024
Identities = 38/127 (29%), Positives = 49/127 (38%), Gaps = 11/127 (8%)
Query: 2 PGMVPPHVPPQ--MLNIPQTSLQAKP--VAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTS 57
PG PPQ + PQ +Q P Q P+ G P QGP P+ + PL D
Sbjct: 856 PGSQSQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPIPFQ-QQKTPLLGDGP 914
Query: 58 GKNLTEQNSYSN----IPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSSSD- 112
++ + IP G+ R P+NP Q PN DS P S+
Sbjct: 915 RAPFNQEGQSTGPPPLIPGLGQQ-GAQGRIPPLNPGQGPGPNKGDSRGPPNHHMGPMSER 973
Query: 113 NDEGSGG 119
E SGG
Sbjct: 974 RHEQSGG 980
>gi|4557853 transcription factor SOX9 [Homo sapiens]
Length = 509
Score = 35.4 bits (80), Expect = 0.031
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 6 PPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNL-TEQ 64
PP PPQ PQ Q + PQ P+ AP Q P ++L+ + + ++ TEQ
Sbjct: 345 PPQQPPQAPPAPQAPPQPQAAPPQQPA---APPQQPQAHTLTTLSSEPGQSQRTHIKTEQ 401
Query: 65 NSYSNIPHEGKHTPLYERSLPIN-PAQSGS-PNHVDSAYFPGSSTSSSSDNDEGSGGAT 121
S S+ + +H+P P N P S S P S Y +SSS +G T
Sbjct: 402 LSPSHYSEQQQHSPQQIAYSPFNLPHYSPSYPPITRSQYDYTDHQNSSSYYSHAAGQGT 460
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 35.4 bits (80), Expect = 0.031
Identities = 30/104 (28%), Positives = 38/104 (36%), Gaps = 15/104 (14%)
Query: 3 GMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNLT 62
G P PP +P +Q P P +P P G PG P +P P LD G
Sbjct: 805 GQPGPMGPP---GLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGP--- 858
Query: 63 EQNSYSNIPHEGKHTPLYERSLPINPAQS-GSPNHVDSAYFPGS 105
P E + PI P S G P ++ FPG+
Sbjct: 859 --------PGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGT 894
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 35.4 bits (80), Expect = 0.031
Identities = 30/104 (28%), Positives = 38/104 (36%), Gaps = 15/104 (14%)
Query: 3 GMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNLT 62
G P PP +P +Q P P +P P G PG P +P P LD G
Sbjct: 805 GQPGPMGPP---GLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGP--- 858
Query: 63 EQNSYSNIPHEGKHTPLYERSLPINPAQS-GSPNHVDSAYFPGS 105
P E + PI P S G P ++ FPG+
Sbjct: 859 --------PGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGT 894
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 35.4 bits (80), Expect = 0.031
Identities = 30/104 (28%), Positives = 38/104 (36%), Gaps = 15/104 (14%)
Query: 3 GMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNLT 62
G P PP +P +Q P P +P P G PG P +P P LD G
Sbjct: 805 GQPGPMGPP---GLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGP--- 858
Query: 63 EQNSYSNIPHEGKHTPLYERSLPINPAQS-GSPNHVDSAYFPGS 105
P E + PI P S G P ++ FPG+
Sbjct: 859 --------PGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGT 894
>gi|56682953 epidermal growth factor receptor pathway substrate 8
[Homo sapiens]
Length = 822
Score = 35.0 bits (79), Expect = 0.041
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 10 PPQMLNIPQTSLQAKPV---APQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNLTEQNS 66
PP I + ++ P P PSP P P P S PAP+ + N+T QNS
Sbjct: 600 PPYTHTIQKQRMEYGPRPADTPPAPSPPPTPAPVPVPLPPSTPAPVPVSKVPANITRQNS 659
Query: 67 YSN 69
S+
Sbjct: 660 SSS 662
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 35.0 bits (79), Expect = 0.041
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 31/128 (24%)
Query: 7 PHVPPQMLNIPQTSLQ-AKPVAPQ---------VPSPGGAPGQGP-YPYSLSEPAPLTLD 55
P P + ++P+ + +KP PQ + S GG+ G P +P++ +P P
Sbjct: 33 PSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPGP---- 88
Query: 56 TSGKNLTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSSSDNDE 115
PH+ P LP+ PA S + + G + + + N
Sbjct: 89 ---------------PHQPGFNPASSPRLPL-PADSEPDAYTSAPRGSGPTYCAGAGNSR 132
Query: 116 GSGGATKY 123
GG TKY
Sbjct: 133 AGGGLTKY 140
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 35.0 bits (79), Expect = 0.041
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 31/128 (24%)
Query: 7 PHVPPQMLNIPQTSLQ-AKPVAPQ---------VPSPGGAPGQGP-YPYSLSEPAPLTLD 55
P P + ++P+ + +KP PQ + S GG+ G P +P++ +P P
Sbjct: 33 PSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPGP---- 88
Query: 56 TSGKNLTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSSSDNDE 115
PH+ P LP+ PA S + + G + + + N
Sbjct: 89 ---------------PHQPGFNPASSPRLPL-PADSEPDAYTSAPRGSGPTYCAGAGNSR 132
Query: 116 GSGGATKY 123
GG TKY
Sbjct: 133 AGGGLTKY 140
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 35.0 bits (79), Expect = 0.041
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 31/128 (24%)
Query: 7 PHVPPQMLNIPQTSLQ-AKPVAPQ---------VPSPGGAPGQGP-YPYSLSEPAPLTLD 55
P P + ++P+ + +KP PQ + S GG+ G P +P++ +P P
Sbjct: 33 PSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPGP---- 88
Query: 56 TSGKNLTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSSSDNDE 115
PH+ P LP+ PA S + + G + + + N
Sbjct: 89 ---------------PHQPGFNPASSPRLPL-PADSEPDAYTSAPRGSGPTYCAGAGNSR 132
Query: 116 GSGGATKY 123
GG TKY
Sbjct: 133 AGGGLTKY 140
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 34.7 bits (78), Expect = 0.053
Identities = 35/127 (27%), Positives = 46/127 (36%), Gaps = 11/127 (8%)
Query: 6 PPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYS----LSEPAPLTLDTSGKNL 61
PP P +P P VP PG PG GP P S L PL +
Sbjct: 36 PPSAPAGGGQLPAAGAARSTAVPPVPGPGPGPGPGPGPGSTSRRLDPKEPLGNQRAASPT 95
Query: 62 TEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPN---HVDSAYFPGSSTSSSSDNDEGSG 118
+Q S + HE +P R+ ++ P VDS S S S D GS
Sbjct: 96 PKQASATTPGHE---SPRETRAQGPAGQEADGPRRTLQVDSR-TQRSGRSPSVSPDRGST 151
Query: 119 GATKYTI 125
+ Y++
Sbjct: 152 PTSPYSV 158
Score = 27.3 bits (59), Expect = 8.5
Identities = 28/115 (24%), Positives = 41/115 (35%), Gaps = 18/115 (15%)
Query: 10 PPQMLNIPQTSLQAKPV----APQVPSPGGAPGQGPYPYSLSEPA--PLTLDTSGKNLTE 63
P Q L + Q++P AP P G P GP + +PA P T+G T
Sbjct: 3790 PQQALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQPAGPPRAEQTNGSKGT- 3848
Query: 64 QNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSG 118
+ P +G R+ PA P V + PG + + + G
Sbjct: 3849 ----AKAPQQG-------RAPQAQPAPGPGPAGVKAGARPGGTPGAPAGQPGADG 3892
>gi|4557317 annexin A11 [Homo sapiens]
Length = 505
Score = 34.7 bits (78), Expect = 0.053
Identities = 30/100 (30%), Positives = 35/100 (35%), Gaps = 12/100 (12%)
Query: 2 PGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGA-PGQGPYPYSLSEPAPLTLDTSGKN 60
PG PP P P + +P+ P P GA PGQ P Y P PL
Sbjct: 109 PGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTYPGQPPVPLP-----GQ 163
Query: 61 LTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSA 100
SY P G TP + P Q GS + A
Sbjct: 164 QQPVPSYPGYPGSGTVTP------AVPPTQFGSRGTITDA 197
Score = 28.5 bits (62), Expect = 3.8
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 2 PGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGG-----APGQGPYP 43
PG P VPP P ++ Q P P PGG P PYP
Sbjct: 78 PGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYP 124
>gi|22165433 annexin A11 [Homo sapiens]
Length = 505
Score = 34.7 bits (78), Expect = 0.053
Identities = 30/100 (30%), Positives = 35/100 (35%), Gaps = 12/100 (12%)
Query: 2 PGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGA-PGQGPYPYSLSEPAPLTLDTSGKN 60
PG PP P P + +P+ P P GA PGQ P Y P PL
Sbjct: 109 PGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTYPGQPPVPLP-----GQ 163
Query: 61 LTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSA 100
SY P G TP + P Q GS + A
Sbjct: 164 QQPVPSYPGYPGSGTVTP------AVPPTQFGSRGTITDA 197
Score = 28.5 bits (62), Expect = 3.8
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 2 PGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGG-----APGQGPYP 43
PG P VPP P ++ Q P P PGG P PYP
Sbjct: 78 PGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYP 124
>gi|22165431 annexin A11 [Homo sapiens]
Length = 505
Score = 34.7 bits (78), Expect = 0.053
Identities = 30/100 (30%), Positives = 35/100 (35%), Gaps = 12/100 (12%)
Query: 2 PGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGA-PGQGPYPYSLSEPAPLTLDTSGKN 60
PG PP P P + +P+ P P GA PGQ P Y P PL
Sbjct: 109 PGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTYPGQPPVPLP-----GQ 163
Query: 61 LTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSA 100
SY P G TP + P Q GS + A
Sbjct: 164 QQPVPSYPGYPGSGTVTP------AVPPTQFGSRGTITDA 197
Score = 28.5 bits (62), Expect = 3.8
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 2 PGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGG-----APGQGPYP 43
PG P VPP P ++ Q P P PGG P PYP
Sbjct: 78 PGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYP 124
>gi|92091600 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain
1 isoform c [Homo sapiens]
Length = 1450
Score = 34.3 bits (77), Expect = 0.070
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 20/121 (16%)
Query: 2 PGMVPPHVPPQMLNI-PQTS-------LQAKPVAP-------QVPSPGGAPGQGPYPYSL 46
P PP +PP+ + + P+ + P AP + P P P L
Sbjct: 208 PPPCPPEIPPKPVRLFPEFDDSDYDEVPEEGPGAPARVMTKKEEPPPSRVPRAVRVASLL 267
Query: 47 SEPAPLTLDTSGKNLTEQNSYSNIPHEGKHTPLYERSLPINPAQSGSPNHVDSAYFPGSS 106
SE L+ D G + ++Y +P+ G HT SLP A +P+ +D PG S
Sbjct: 268 SEGEELSGDDQGDEEEDDHAYEGVPNGGWHTSSLSLSLPSTIA---APHPMDGP--PGGS 322
Query: 107 T 107
T
Sbjct: 323 T 323
>gi|7019549 T-box 21 [Homo sapiens]
Length = 535
Score = 33.9 bits (76), Expect = 0.091
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 5 VPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPY----PYSLSEPAPLTLDTSGKN 60
V P PP+M P + + P P PGG+ G+GP P +E AP+ ++S
Sbjct: 434 VAPQYPPKMG--PASWFRPMRTLPMEPGPGGSEGRGPEDQGPPLVWTEIAPIRPESSDSG 491
Query: 61 LTEQNS 66
L E +S
Sbjct: 492 LGEGDS 497
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 33.9 bits (76), Expect = 0.091
Identities = 42/145 (28%), Positives = 55/145 (37%), Gaps = 27/145 (18%)
Query: 1 MPGMVPPH-VP-------------PQMLNIPQTSLQ--AKPVAPQVPSPGGAPGQGPYPY 44
+PG +PP VP PQ++ QT LQ K P VP P Q P P
Sbjct: 556 LPGRLPPAGVPTAALSSALQFAQQPQVVEA-QTQLQIPVKTQQPNVPIPAPPSSQLPIPP 614
Query: 45 SLSEPAPLTLDTSGKNLTEQNSYSNIPHEGKHT-------PLYERSLPINPAQSGSPNHV 97
S L + T GK + + S++P T P R LP + S +P
Sbjct: 615 SQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSSTSSLAP--- 671
Query: 98 DSAYFPGSSTSSSSDNDEGSGGATK 122
S PG S + SS + S K
Sbjct: 672 VSGSGPGPSPARSSPVNRPSSATNK 696
Score = 27.7 bits (60), Expect = 6.5
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Query: 6 PPHVPPQMLNIPQTSLQAKPVAPQV--PSPGGAPGQGPYPYSLSEPAPLTLDTSG 58
PP PP L PQ + P P P P P P P A + T G
Sbjct: 2516 PPQQPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPAITTGG 2570
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.130 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,767,149
Number of Sequences: 37866
Number of extensions: 638774
Number of successful extensions: 4587
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 305
Number of HSP's that attempted gapping in prelim test: 3707
Number of HSP's gapped (non-prelim): 1122
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.