PTCHD2 4858

Name: PTCHD2	Sequence: fasta or formatted (1392aa)		NCBI GI: 149274653
Description: patched domain containing 2		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 121 3 C cysteine 2.4 34 2 D aspartate 3.6 50 3 E glutamate 4.7 65 4 F phenylalanine 5.2 73 3 G glycine 7.3 102 2 H histidine 2.4 34 2 I isoleucine 4.6 64 2 K lysine 3.2 44 2 L leucine 11.7 163 4 M methionine 1.6 22 1 N asparagine 2.5 35 2 P proline 6.1 85 2 Q glutamine 4.5 63 3 R arginine 5.2 72 2 S serine 9.0 125 3 T threonine 5.1 71 2 V valine 7.3 101 2 W tryptophan 1.9 26 1 Y tyrosine 3.0 42 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 patched domain containing 2 DISP1 0.022 dispatched A PTCH2 0.015 patched 2 NPC1 0.014 Niemann-Pick disease, type C1 precursor DISP2 0.013 dispatched B PTCH1 0.010 patched isoform S PTCH1 0.010 patched isoform S PTCH1 0.010 patched isoform S PTCH1 0.010 patched isoform S PTCH1 0.010 patched isoform L' PTCH1 0.010 patched isoform M PTCH1 0.010 patched isoform L PTCHD3 0.009 patched domain containing 3 NPC1L1 0.009 Niemann-Pick C1-like protein 1 isoform 2 NPC1L1 0.009 Niemann-Pick C1-like protein 1 isoform 1 SRrp35 0.004 serine-arginine repressor protein C6orf138 0.004 hypothetical protein LOC442213 NID1 0.003 nidogen 1 precursor SIK1 0.003 SNF1-like kinase LCA5 0.003 Leber congenital amaurosis 5 LCA5 0.003 Leber congenital amaurosis 5 AGAP2 0.003 centaurin, gamma 1 isoform PIKE-L LOC100128142 0.003 PREDICTED: hypothetical protein LOC100128142 0.003 PREDICTED: similar to RIKEN cDNA E130309D14 DOCK4 0.003 dedicator of cytokinesis 4 MLL3 0.003 myeloid/lymphoid or mixed-lineage leukemia 3 KDM6A 0.003 ubiquitously transcribed tetratricopeptide repeat, ... TTBK1 0.003 tau tubulin kinase 1 SFRS11 0.003 splicing factor, arginine/serine-rich 11 MINK1 0.003 misshapen/NIK-related kinase isoform 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.