PTCHD3 10837

Name: PTCHD3	Sequence: fasta or formatted (767aa)		NCBI GI: 194018513
Description: patched domain containing 3		Referenced in: Hedgehog and Related Pathways
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 46 2 C cysteine 2.3 18 2 D aspartate 5.5 42 2 E glutamate 5.3 41 3 F phenylalanine 6.6 51 2 G glycine 5.3 41 2 H histidine 2.2 17 1 I isoleucine 5.9 45 2 K lysine 5.1 39 3 L leucine 10.2 78 3 M methionine 1.8 14 1 N asparagine 3.8 29 2 P proline 7.0 54 3 Q glutamine 3.5 27 2 R arginine 4.2 32 2 S serine 7.7 59 3 T threonine 5.2 40 2 V valine 6.4 49 2 W tryptophan 1.6 12 1 Y tyrosine 4.3 33 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 patched domain containing 3 PTCHD1 0.105 patched domain containing 1 C6orf138 0.083 hypothetical protein LOC442213 NPC1 0.053 Niemann-Pick disease, type C1 precursor NPC1L1 0.048 Niemann-Pick C1-like protein 1 isoform 2 NPC1L1 0.048 Niemann-Pick C1-like protein 1 isoform 1 PTCH1 0.038 patched isoform S PTCH1 0.038 patched isoform S PTCH1 0.038 patched isoform S PTCH1 0.038 patched isoform S PTCH1 0.038 patched isoform L' PTCH1 0.038 patched isoform M PTCH1 0.038 patched isoform L PTCH2 0.035 patched 2 DISP1 0.024 dispatched A PTCHD2 0.016 patched domain containing 2 PWWP2A 0.014 PWWP domain containing 2A isoform b PWWP2A 0.014 PWWP domain containing 2A isoform a PRR12 0.014 proline rich 12 DGKK 0.013 diacylglycerol kinase kappa COL18A1 0.012 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.012 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.012 alpha 1 type XVIII collagen isoform 1 precursor [Ho... HMGCR 0.012 3-hydroxy-3-methylglutaryl-Coenzyme A reductase iso... HMGCR 0.012 3-hydroxy-3-methylglutaryl-Coenzyme A reductase isofo... COL5A1 0.011 alpha 1 type V collagen preproprotein TCEB3CL 0.011 transcription elongation factor B polypeptide 3C-li... TCEB3C 0.011 transcription elongation factor B polypeptide 3C [H... ROBO1 0.011 roundabout 1 isoform d ROBO1 0.011 roundabout 1 isoform c Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.