PTCH2 32090

Name: PTCH2	Sequence: fasta or formatted (1203aa)		NCBI GI: 52145305
Description: patched 2		Referenced in: Hedgehog and Related Pathways
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.8 130 2 C cysteine 2.1 25 2 D aspartate 3.1 37 2 E glutamate 5.0 60 3 F phenylalanine 4.7 56 2 G glycine 8.1 97 3 H histidine 3.1 37 2 I isoleucine 3.8 46 2 K lysine 1.9 23 1 L leucine 15.3 184 4 M methionine 1.7 21 2 N asparagine 1.6 19 2 P proline 7.1 85 4 Q glutamine 5.6 67 2 R arginine 4.5 54 3 S serine 6.4 77 3 T threonine 5.2 63 2 V valine 6.2 74 2 W tryptophan 1.6 19 1 Y tyrosine 2.4 29 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 patched 2 PTCH1 0.524 patched isoform L PTCH1 0.524 patched isoform L' PTCH1 0.524 patched isoform M PTCH1 0.477 patched isoform S PTCH1 0.477 patched isoform S PTCH1 0.477 patched isoform S PTCH1 0.477 patched isoform S NPC1 0.040 Niemann-Pick disease, type C1 precursor NPC1L1 0.036 Niemann-Pick C1-like protein 1 isoform 2 NPC1L1 0.036 Niemann-Pick C1-like protein 1 isoform 1 PTCHD3 0.023 patched domain containing 3 SCAP 0.020 SREBF chaperone protein PTCHD2 0.018 patched domain containing 2 C6orf138 0.018 hypothetical protein LOC442213 PTCHD1 0.016 patched domain containing 1 DISP1 0.009 dispatched A SH3BP1 0.006 SH3-domain binding protein 1 DISP2 0.006 dispatched B HNRNPUL1 0.006 heterogeneous nuclear ribonucleoprotein U-like 1 iso... HNRNPUL1 0.006 heterogeneous nuclear ribonucleoprotein U-like 1 iso... RANBP9 0.005 RAN binding protein 9 PCDHGB1 0.005 protocadherin gamma subfamily B, 1 isoform 2 precurs... PCDHGB1 0.005 protocadherin gamma subfamily B, 1 isoform 1 precurs... ZBTB4 0.005 zinc finger and BTB domain containing 4 ZBTB4 0.005 zinc finger and BTB domain containing 4 WAS 0.005 Wiskott-Aldrich syndrome protein PCDHGB5 0.005 protocadherin gamma subfamily B, 5 isoform 2 precurs... PCDHGB5 0.005 protocadherin gamma subfamily B, 5 isoform 1 precurs... CNGB1 0.004 cyclic nucleotide gated channel beta 1 isoform b [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.