C6orf138 4432

Name: C6orf138	Sequence: fasta or formatted (829aa)		NCBI GI: 148277106
Description: hypothetical protein LOC442213		Referenced in: Hedgehog and Related Pathways
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 37 2 C cysteine 2.4 20 2 D aspartate 3.5 29 2 E glutamate 4.3 36 2 F phenylalanine 7.4 61 2 G glycine 5.1 42 2 H histidine 3.3 27 2 I isoleucine 7.0 58 2 K lysine 4.8 40 4 L leucine 12.9 107 3 M methionine 1.7 14 1 N asparagine 3.6 30 2 P proline 3.7 31 2 Q glutamine 4.3 36 2 R arginine 4.3 36 2 S serine 9.3 77 3 T threonine 5.9 49 2 V valine 7.2 60 2 W tryptophan 1.1 9 1 Y tyrosine 3.6 30 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC442213 PTCHD1 0.470 patched domain containing 1 PTCHD3 0.079 patched domain containing 3 NPC1L1 0.048 Niemann-Pick C1-like protein 1 isoform 2 NPC1 0.046 Niemann-Pick disease, type C1 precursor NPC1L1 0.043 Niemann-Pick C1-like protein 1 isoform 1 PTCH1 0.033 patched isoform S PTCH1 0.033 patched isoform S PTCH1 0.033 patched isoform S PTCH1 0.033 patched isoform S PTCH1 0.033 patched isoform L' PTCH1 0.033 patched isoform M PTCH1 0.033 patched isoform L PTCH2 0.026 patched 2 HMGCR 0.014 3-hydroxy-3-methylglutaryl-Coenzyme A reductase iso... HMGCR 0.014 3-hydroxy-3-methylglutaryl-Coenzyme A reductase isofo... DISP1 0.007 dispatched A PTCHD2 0.007 patched domain containing 2 OR52B4 0.005 olfactory receptor, family 52, subfamily B, member 4... FASTKD1 0.004 FAST kinase domains 1 ADCY2 0.004 adenylate cyclase 2 LCA5L 0.004 Leber congenital amaurosis 5-like ZCRB1 0.003 zinc finger CCHC-type and RNA binding motif 1 TRIM28 0.003 tripartite motif-containing 28 protein ADCY10 0.003 adenylate cyclase 10 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.