Guide to the Human Genome
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Name: LBH Sequence: fasta or formatted (105aa) NCBI GI: 149274624
Description:

limb bud and heart development homolog

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.9          2           1
 C cysteine            3.8          4           2
 D aspartate           7.6          8           1
 E glutamate          15.2         16           2
 F phenylalanine       3.8          4           1
 G glycine             3.8          4           1
 H histidine           1.0          1           1
 I isoleucine          4.8          5           1
 K lysine              5.7          6           1
 L leucine             6.7          7           1
 M methionine          4.8          5           2
 N asparagine          2.9          3           1
 P proline             9.5         10           2
 Q glutamine           4.8          5           1
 R arginine            4.8          5           1
 S serine              6.7          7           1
 T threonine           3.8          4           1
 V valine              4.8          5           2
 W tryptophan          1.0          1           1
 Y tyrosine            2.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   limb bud and heart development homolog 
C11orf48              0.066   hypothetical protein LOC79081 
GRID1                 0.020   glutamate receptor, ionotropic, delta 1 precursor [H...
PAXIP1                0.015   PAX interacting protein 1 
CHKB                  0.015   choline kinase beta 
LMTK2                 0.015   lemur tyrosine kinase 2 
PREX2                 0.015   DEP domain containing 2 isoform b 
PREX2                 0.015   DEP domain containing 2 isoform a 
LOC647020             0.010   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.010   PREDICTED: similar to acidic (leucine-rich) nuclear...
METT10D               0.010   methyltransferase 10 domain containing 
SNX15                 0.010   sorting nexin 15 isoform A 
PRG2                  0.010   plasticity-related protein 2 
EIF5B                 0.010   eukaryotic translation initiation factor 5B 
RRP12                 0.005   ribosomal RNA processing 12 homolog isoform 2 [Homo...
RRP12                 0.005   ribosomal RNA processing 12 homolog isoform 1 [Homo...
PTPN13                0.005   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.005   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.005   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.005   protein tyrosine phosphatase, non-receptor type 13 is...
HDGF                  0.005   hepatoma-derived growth factor isoform c 
HDGF                  0.005   hepatoma-derived growth factor isoform b 
HDGF                  0.005   hepatoma-derived growth factor isoform a 
CHIC1                 0.005   cysteine-rich hydrophobic domain 1 
ZFYVE27               0.005   zinc finger, FYVE domain containing 27 isoform c [Ho...
LOC100133923          0.005   PREDICTED: similar to UPF0634 protein C 
ANKRD36               0.005   PREDICTED: ankyrin repeat domain 36 
LOC728792             0.005   PREDICTED: hypothetical protein 
ANKRD36               0.005   PREDICTED: ankyrin repeat domain 36 
ANP32E                0.005   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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