HDGF 30711

Name: HDGF	Sequence: fasta or formatted (240aa)		NCBI GI: 4758516
Description: hepatoma-derived growth factor isoform a		Referenced in: Liver
Other entries for this name: alt prot [256aa] hepatoma-derived growth factor isoform b alt prot [233aa] hepatoma-derived growth factor isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 19 2 C cysteine 0.8 2 1 D aspartate 5.0 12 1 E glutamate 19.6 47 6 F phenylalanine 3.3 8 3 G glycine 8.3 20 1 H histidine 1.2 3 1 I isoleucine 1.7 4 1 K lysine 11.2 27 2 L leucine 4.6 11 2 M methionine 1.7 4 1 N asparagine 3.8 9 2 P proline 8.8 21 2 Q glutamine 2.1 5 1 R arginine 4.2 10 2 S serine 6.7 16 2 T threonine 2.9 7 1 V valine 3.3 8 1 W tryptophan 0.8 2 1 Y tyrosine 2.1 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hepatoma-derived growth factor isoform a HDGF 0.868 hepatoma-derived growth factor isoform b HDGF 0.866 hepatoma-derived growth factor isoform c HDGFL1 0.478 hepatoma derived growth factor-like 1 HDGFRP3 0.382 hepatoma-derived growth factor, related protein 3 [Ho... PSIP1 0.341 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... PSIP1 0.341 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo... PSIP1 0.341 PC4 and SFRS1 interacting protein 1 isoform 2 HDGF2 0.303 hepatoma-derived growth factor-related protein 2 iso... HDGF2 0.303 hepatoma-derived growth factor-related protein 2 iso... N-PAC 0.094 cytokine-like nuclear factor n-pac RPGR 0.083 retinitis pigmentosa GTPase regulator isoform C [Hom... NEFH 0.055 neurofilament, heavy polypeptide 200kDa WHSC1 0.055 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.055 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.055 Wolf-Hirschhorn syndrome candidate 1 protein isoform ... WHSC1 0.055 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.055 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.055 Wolf-Hirschhorn syndrome candidate 1 protein isofor... SMTNL1 0.051 smoothelin-like 1 NSBP1 0.051 nucleosomal binding protein 1 SLC24A1 0.049 solute carrier family 24 (sodium/potassium/calcium ex... GTF2F1 0.047 general transcription factor IIF, polypeptide 1, 74... YTHDC1 0.047 splicing factor YT521-B isoform 2 YTHDC1 0.047 splicing factor YT521-B isoform 1 CASC3 0.047 metastatic lymph node 51 WHSC1L1 0.045 WHSC1L1 protein isoform long WHSC1L1 0.045 WHSC1L1 protein isoform short SMARCC2 0.043 SWI/SNF-related matrix-associated actin-dependent re... SMARCC2 0.043 SWI/SNF-related matrix-associated actin-dependent re... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.