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Search of human proteins with 149158723
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149158723 N-terminal EF-hand calcium binding protein 3
isoform 2 [Homo sapiens]
(396 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149158723 N-terminal EF-hand calcium binding protein 3 isofor... 816 0.0
gi|149158725 N-terminal EF-hand calcium binding protein 3 isofor... 717 0.0
gi|24308279 N-terminal EF-hand calcium binding protein 1 [Homo s... 292 3e-79
gi|32129214 neuronal calcium-binding protein 2 [Homo sapiens] 246 3e-65
gi|90265805 phospholipase C, delta 1 isoform 2 [Homo sapiens] 39 0.008
gi|195972883 phospholipase C, delta 1 isoform 1 [Homo sapiens] 39 0.008
gi|21264602 laminin alpha 5 [Homo sapiens] 36 0.069
gi|148491091 solute carrier family 25 member 24 isoform 1 [Homo ... 35 0.12
gi|89941479 hypothetical protein LOC148137 [Homo sapiens] 35 0.12
gi|4757898 calbindin 3 [Homo sapiens] 34 0.20
gi|14249340 phospholipase C, delta 4 [Homo sapiens] 34 0.26
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 34 0.26
gi|188536004 zinc finger protein 469 [Homo sapiens] 34 0.26
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 34 0.26
gi|47458041 solute carrier family 25 member 24 isoform 2 [Homo s... 34 0.26
gi|239757232 PREDICTED: hypothetical protein [Homo sapiens] 33 0.34
gi|239751740 PREDICTED: hypothetical protein [Homo sapiens] 33 0.34
gi|239746241 PREDICTED: hypothetical protein XP_002343712 [Homo ... 33 0.34
gi|221316624 dystonin isoform 4 [Homo sapiens] 33 0.34
gi|221316622 dystonin isoform 3 [Homo sapiens] 33 0.34
gi|221316618 dystonin isoform 2 [Homo sapiens] 33 0.34
gi|34577047 dystonin isoform 1 [Homo sapiens] 33 0.34
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 33 0.34
gi|71040096 Rho GTPase activating protein 30 isoform 2 [Homo sap... 33 0.34
gi|71040098 Rho GTPase activating protein 30 isoform 1 [Homo sap... 33 0.34
gi|33188443 microfilament and actin filament cross-linker protei... 33 0.45
gi|33188445 microfilament and actin filament cross-linker protei... 33 0.45
gi|148539855 epidermal growth factor receptor pathway substrate ... 33 0.45
gi|148539853 epidermal growth factor receptor pathway substrate ... 33 0.45
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 32 0.77
>gi|149158723 N-terminal EF-hand calcium binding protein 3 isoform 2
[Homo sapiens]
Length = 396
Score = 816 bits (2108), Expect = 0.0
Identities = 396/396 (100%), Positives = 396/396 (100%)
Query: 1 MACAGLLTVCLLRPPAPQPQPQTPRHPQLAPDPGPAGHTLFQDVFRRADKNDDGKLSFEE 60
MACAGLLTVCLLRPPAPQPQPQTPRHPQLAPDPGPAGHTLFQDVFRRADKNDDGKLSFEE
Sbjct: 1 MACAGLLTVCLLRPPAPQPQPQTPRHPQLAPDPGPAGHTLFQDVFRRADKNDDGKLSFEE 60
Query: 61 FQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYFSEHLGVYRPVLAALESLNRAV 120
FQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYFSEHLGVYRPVLAALESLNRAV
Sbjct: 61 FQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYFSEHLGVYRPVLAALESLNRAV 120
Query: 121 LAAMDATKLEYERASKVDQFVTRFLLRETVSQLQALQSSLEGASDTLEAQAHGWRSDAES 180
LAAMDATKLEYERASKVDQFVTRFLLRETVSQLQALQSSLEGASDTLEAQAHGWRSDAES
Sbjct: 121 LAAMDATKLEYERASKVDQFVTRFLLRETVSQLQALQSSLEGASDTLEAQAHGWRSDAES 180
Query: 181 VEAQSRLCGSRRAGRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVNRLQELIDQLEC 240
VEAQSRLCGSRRAGRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVNRLQELIDQLEC
Sbjct: 181 VEAQSRLCGSRRAGRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVNRLQELIDQLEC 240
Query: 241 KVRAVGPGPHKGGPSWYPPEPGPCWRPGPHSVPSQAPRLEPLREEDLAKGPDLHILMAQR 300
KVRAVGPGPHKGGPSWYPPEPGPCWRPGPHSVPSQAPRLEPLREEDLAKGPDLHILMAQR
Sbjct: 241 KVRAVGPGPHKGGPSWYPPEPGPCWRPGPHSVPSQAPRLEPLREEDLAKGPDLHILMAQR 300
Query: 301 QVQVAEEGLQDFHRALRCYVDFTGAQSHCLHVSAQKMLDGASFTLYEFWQDEASWRRHQQ 360
QVQVAEEGLQDFHRALRCYVDFTGAQSHCLHVSAQKMLDGASFTLYEFWQDEASWRRHQQ
Sbjct: 301 QVQVAEEGLQDFHRALRCYVDFTGAQSHCLHVSAQKMLDGASFTLYEFWQDEASWRRHQQ 360
Query: 361 SPGSKAFQRILIDHLRAPDTLTTVFFPASWWIMNNN 396
SPGSKAFQRILIDHLRAPDTLTTVFFPASWWIMNNN
Sbjct: 361 SPGSKAFQRILIDHLRAPDTLTTVFFPASWWIMNNN 396
>gi|149158725 N-terminal EF-hand calcium binding protein 3 isoform 1
[Homo sapiens]
Length = 362
Score = 717 bits (1850), Expect = 0.0
Identities = 362/396 (91%), Positives = 362/396 (91%), Gaps = 34/396 (8%)
Query: 1 MACAGLLTVCLLRPPAPQPQPQTPRHPQLAPDPGPAGHTLFQDVFRRADKNDDGKLSFEE 60
MACAGLLTVCLLRPPAPQPQPQTPRHPQLAPDPGPAGHTLFQDVFRRADKNDDGKLSFEE
Sbjct: 1 MACAGLLTVCLLRPPAPQPQPQTPRHPQLAPDPGPAGHTLFQDVFRRADKNDDGKLSFEE 60
Query: 61 FQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYFSEHLGVYRPVLAALESLNRAV 120
FQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYFSEHLGVYRPVLAALESLNRAV
Sbjct: 61 FQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYFSEHLGVYRPVLAALESLNRAV 120
Query: 121 LAAMDATKLEYERASKVDQFVTRFLLRETVSQLQALQSSLEGASDTLEAQAHGWRSDAES 180
LAAMDATKLEYERASKVDQFVTRFLLRETVSQLQALQSSLEGASDTLEAQAHGWRSDAES
Sbjct: 121 LAAMDATKLEYERASKVDQFVTRFLLRETVSQLQALQSSLEGASDTLEAQAHGWRSDAES 180
Query: 181 VEAQSRLCGSRRAGRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVNRLQELIDQLEC 240
VEAQSRLCGSRRAGRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVNRLQELIDQLEC
Sbjct: 181 VEAQSRLCGSRRAGRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVNRLQELIDQLEC 240
Query: 241 KVRAVGPGPHKGGPSWYPPEPGPCWRPGPHSVPSQAPRLEPLREEDLAKGPDLHILMAQR 300
K APRLEPLREEDLAKGPDLHILMAQR
Sbjct: 241 K----------------------------------APRLEPLREEDLAKGPDLHILMAQR 266
Query: 301 QVQVAEEGLQDFHRALRCYVDFTGAQSHCLHVSAQKMLDGASFTLYEFWQDEASWRRHQQ 360
QVQVAEEGLQDFHRALRCYVDFTGAQSHCLHVSAQKMLDGASFTLYEFWQDEASWRRHQQ
Sbjct: 267 QVQVAEEGLQDFHRALRCYVDFTGAQSHCLHVSAQKMLDGASFTLYEFWQDEASWRRHQQ 326
Query: 361 SPGSKAFQRILIDHLRAPDTLTTVFFPASWWIMNNN 396
SPGSKAFQRILIDHLRAPDTLTTVFFPASWWIMNNN
Sbjct: 327 SPGSKAFQRILIDHLRAPDTLTTVFFPASWWIMNNN 362
>gi|24308279 N-terminal EF-hand calcium binding protein 1 [Homo
sapiens]
Length = 351
Score = 292 bits (748), Expect = 3e-79
Identities = 162/363 (44%), Positives = 220/363 (60%), Gaps = 42/363 (11%)
Query: 37 GHTLFQDVFRRADKNDDGKLSFEEFQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLC 96
G ++F D+ RRADKNDDGKLSFEEF+ YFADGVLS EL ELF ID H T+NL+TE+LC
Sbjct: 27 GMSIFLDILRRADKNDDGKLSFEEFKAYFADGVLSGEELHELFHTIDTHNTNNLDTEELC 86
Query: 97 DYFSEHLGVYRPVLAALESLNRAVLAAMDATKLEYERASKVDQFVTRFLLRETVSQLQAL 156
+YFS+HLG Y VLAALE LN ++L AM TK +Y+ AS ++QFVTRFLL+ET++QLQ+L
Sbjct: 87 EYFSQHLGEYENVLAALEDLNLSILKAMGKTKKDYQEASNLEQFVTRFLLKETLNQLQSL 146
Query: 157 QSSLEGASDTLEAQAHGWRSDAESVEAQSRLCGSRRAGRRALRSVSRSSTWSPGSSDTGR 216
Q+SLE A +T E Q R A+ + + G+R+ R V R +++SP S
Sbjct: 147 QNSLECAMETTEEQTRQERQG----PAKPEVLSIQWPGKRSSRRVQRHNSFSPNSPQFNV 202
Query: 217 SS----EAEMQWRLQVNRLQELIDQLECKVRAVGPGPHKGGPSWYPPEPGPCWRPGPHSV 272
S E + QW Q+NRLQ+LID+LE K
Sbjct: 203 SGPGLLEEDNQWMTQINRLQKLIDRLEKK------------------------------- 231
Query: 273 PSQAPRLEPLREEDLAKGPDLHILMAQRQVQVAEEGLQDFHRALRCYVDFTGAQSHCLHV 332
+LEP EE + HI++ QRQ+ V EE L++F AL+ YV+ +QS CL +
Sbjct: 232 ---DLKLEPPEEEIIEGNTKSHIMLVQRQMSVIEEDLEEFQLALKHYVESASSQSGCLRI 288
Query: 333 SAQKMLDGASFTLYEFWQDEASWRRHQQSPGSKAFQRILIDHLRAPDTLTTVFFPASWWI 392
S QK+ + + + +YEFW++ + W H Q+ SK FQR +D L P+ +T+ PASWWI
Sbjct: 289 SIQKLSNESRYMIYEFWENSSVWNSHLQTNYSKTFQRSNVDFLETPELTSTMLVPASWWI 348
Query: 393 MNN 395
+NN
Sbjct: 349 LNN 351
>gi|32129214 neuronal calcium-binding protein 2 [Homo sapiens]
Length = 386
Score = 246 bits (628), Expect = 3e-65
Identities = 146/380 (38%), Positives = 212/380 (55%), Gaps = 48/380 (12%)
Query: 20 QPQTPRHPQLAPDPGPA----GHTLFQDVFRRADKNDDGKLSFEEFQNYFADGVLSLGEL 75
+P+ P DPGPA G + D+FRRADKNDDGKLS EEFQ +FADGVL+ EL
Sbjct: 40 EPRESLAPAAPADPGPASPRGGTAVILDIFRRADKNDDGKLSLEEFQLFFADGVLNEKEL 99
Query: 76 QELFSGIDGHLTDNLETEKLCDYFSEHLGVYRPVLAALESLNRAVLAAMDATKLEYERAS 135
++LF ID T++++T++LCDYF +H+G Y VLA+LE+LN +VL AM TK YE S
Sbjct: 100 EDLFHTIDSDNTNHVDTKELCDYFVDHMGDYEDVLASLETLNHSVLKAMGYTKKVYEGGS 159
Query: 136 KVDQFVTRFLLRETVSQLQALQSSLEGASDTLEAQAHGWRSD--AESVEAQSRLCGS--- 190
VDQFVTRFLL+ET +Q+Q+L SS+E A + +E Q R + S A CGS
Sbjct: 160 NVDQFVTRFLLKETANQIQSLLSSVESAVEAIEEQTSQLRQNHIKPSHSAAQTWCGSPTP 219
Query: 191 RRAGRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVNRLQELIDQLECKVRAVGPGPH 250
A L ++ + T + D E Q++RL ELI +LE K
Sbjct: 220 ASAPNHKLMAMEQGKTLPSATEDA-----KEEGLEAQISRLAELIGRLESKA-------- 266
Query: 251 KGGPSWYPPEPGPCWRPGPHSVPSQAPRLEPLREEDLAKGPDLHILMAQRQVQVAEEGLQ 310
W+ + + L +ED G ++H+ + ++++ V E L
Sbjct: 267 ----LWFDLQ-------------------QRLSDED---GTNMHLQLVRQEMAVCPEQLS 300
Query: 311 DFHRALRCYVDFTGAQSHCLHVSAQKMLDGASFTLYEFWQDEASWRRHQQSPGSKAFQRI 370
+F +LR Y+ T +C H++A ++ DG +F +YEFW+ E +W+RH QSP KAF+ +
Sbjct: 301 EFLDSLRQYLRGTTGVRNCFHITAVRLSDGFTFVIYEFWETEEAWKRHLQSPLCKAFRHV 360
Query: 371 LIDHLRAPDTLTTVFFPASW 390
+D L P+ L+ + PA+W
Sbjct: 361 KVDTLSQPEALSRILVPAAW 380
>gi|90265805 phospholipase C, delta 1 isoform 2 [Homo sapiens]
Length = 756
Score = 38.9 bits (89), Expect = 0.008
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 46 RRADKNDDGKLSFEEFQNYFADGVLSLGE--LQELFSGIDGHLTDNLETEKL 95
R+ADKN D K+SF+E QN+ + + + + +++F D TD+LE E++
Sbjct: 150 RKADKNKDNKMSFKELQNFLKELNIQVDDSYARKIFRECDHSQTDSLEDEEI 201
>gi|195972883 phospholipase C, delta 1 isoform 1 [Homo sapiens]
Length = 777
Score = 38.9 bits (89), Expect = 0.008
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 46 RRADKNDDGKLSFEEFQNYFADGVLSLGE--LQELFSGIDGHLTDNLETEKL 95
R+ADKN D K+SF+E QN+ + + + + +++F D TD+LE E++
Sbjct: 171 RKADKNKDNKMSFKELQNFLKELNIQVDDSYARKIFRECDHSQTDSLEDEEI 222
>gi|21264602 laminin alpha 5 [Homo sapiens]
Length = 3695
Score = 35.8 bits (81), Expect = 0.069
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 114 ESLNRAVLAAMDATKLEYERASKVDQFVTRFLLRETVSQLQALQSSLEGASDTLEAQAHG 173
E+LNRAV A +A +L ++++ + R +E LQ++L A DTL +
Sbjct: 2386 EALNRAVDATREAQELNSRNQERLEEALQR--KQELSRDNATLQATLHAARDTLASVFRL 2443
Query: 174 WRSDAESVEAQSRLCGSRRAGRRALRSVSRSSTWSPGSS 212
S ++ E RL S R L + R T+SP S
Sbjct: 2444 LHSLDQAKEELERLAASLDGARTPL--LQRMQTFSPAGS 2480
>gi|148491091 solute carrier family 25 member 24 isoform 1 [Homo
sapiens]
Length = 477
Score = 35.0 bits (79), Expect = 0.12
Identities = 15/33 (45%), Positives = 17/33 (51%)
Query: 35 PAGHTLFQDVFRRADKNDDGKLSFEEFQNYFAD 67
P G + +F D N DGKL FEEF Y D
Sbjct: 54 PLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKD 86
Score = 29.6 bits (65), Expect = 5.0
Identities = 19/89 (21%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 39 TLFQDVFRRADKNDDGKLSFEEFQNYFADGVLSLGE--LQELFSGIDGHLTDNLETEKLC 96
T ++ +F+ D+N DG + E Q + + LG+ +++F+ D + L+ E+
Sbjct: 22 TRYETLFQALDRNGDGVVDIGELQEGLRNLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFM 81
Query: 97 DYFSEHLGVYRPVLAALESLNRAVLAAMD 125
Y +H + +L+ N + A +
Sbjct: 82 KYLKDHEKKMKLAFKSLDKNNDGKIEASE 110
>gi|89941479 hypothetical protein LOC148137 [Homo sapiens]
Length = 425
Score = 35.0 bits (79), Expect = 0.12
Identities = 41/165 (24%), Positives = 55/165 (33%), Gaps = 25/165 (15%)
Query: 122 AAMDATKLEYERASKVDQFVTRFLLRETVSQLQALQSSLEGASDTLEAQAHGWRSDAESV 181
AA A K E + V V V+ LQ ++ +L H W S +
Sbjct: 145 AAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNL-----------HTWNSSLLDL 193
Query: 182 EAQSRLCGSRRAGRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVNRLQELIDQLECK 241
E S + R +R+ S+S SS+ SP + T + D L
Sbjct: 194 ETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTSS--------------DGLSPF 239
Query: 242 VRAVGPGPHKGGPSWYPPEPGPCWRPGPHSVPSQAPRLEPLREED 286
P KG P P P P P+ A PLR ED
Sbjct: 240 SETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPED 284
>gi|4757898 calbindin 3 [Homo sapiens]
Length = 79
Score = 34.3 bits (77), Expect = 0.20
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 37 GHTLFQDVFRRADKNDDGKLSFEEFQ 62
G D+F+ DKN DG++SFEEFQ
Sbjct: 46 GPNTLDDLFQELDKNGDGEVSFEEFQ 71
>gi|14249340 phospholipase C, delta 4 [Homo sapiens]
Length = 762
Score = 33.9 bits (76), Expect = 0.26
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 43 DVFRRADKNDDGKLSFEEFQN--YFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYF 99
D F+R DKN DGK+SF+E Q + + + LF D + LE E+ ++
Sbjct: 141 DWFQRGDKNQDGKMSFQEVQRLLHLMNVEMDQEYAFSLFQAADTSQSGTLEGEEFVQFY 199
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 33.9 bits (76), Expect = 0.26
Identities = 29/88 (32%), Positives = 34/88 (38%), Gaps = 11/88 (12%)
Query: 206 TWSPGSSDTGRSSEAEMQWRLQVNRLQELIDQLECKVRAVG--PGPHKGGPSWYPPEPGP 263
TWS + + E E Q R Q + + E +V G P P GGP PP PGP
Sbjct: 126 TWSVPNGPS--PEEVEQQKRQQPGPSEHI----ERRVSNAGGPPAPPAGGP---PPPPGP 176
Query: 264 CWRPGPHSVPSQAPRLEPLREEDLAKGP 291
PGP P P P GP
Sbjct: 177 PPPPGPPPPPGLPPSGVPAAAHGAGGGP 204
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 33.9 bits (76), Expect = 0.26
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 15/116 (12%)
Query: 176 SDAESVEAQSRLCGSRRA------GRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVN 229
SD +S QS S + G + L+ SR P S++ G QW+ Q
Sbjct: 2388 SDFQSDSPQSHRNASHQTPQGDPLGPQDLKQRSRGYKKKPASTENG-------QWKGQAP 2440
Query: 230 RLQELIDQLECKVRAVGPGPHKGGPSWYPPEPGPCWRPGPHSVPSQAPRLEPLREE 285
+ R+ GPG + + P PG P P ++P+Q P LEPL ++
Sbjct: 2441 HGPVTCEVCAASFRS-GPGLSRHKARKHRPHPGAPAEPSPAALPAQQP-LEPLAQK 2494
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 33.9 bits (76), Expect = 0.26
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 14 PPAPQPQPQTPRHPQLAPDPGPAGHTLFQDVFRRADKNDDGKLSFEEFQN 63
PP P P TP P +PD PA L D +DG+L E ++
Sbjct: 17 PPPSPPPPSTPSPPPCSPDARPATPHLLHHRLPLPDDREDGELEEGELED 66
Score = 28.9 bits (63), Expect = 8.5
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
Query: 249 PHKGGPSWYPPEPGPCWRPGPHSVPSQAPRLEPLREEDL-------AKGPDLHILMAQRQ 301
P +GGP PP P P PGP +P P EPL + L K P L ++ +
Sbjct: 536 PMQGGPPPPPPPPPP--PPGPPQMP--MPVHEPLSPQQLQQQDMYNKKIPSLFEIVVRPT 591
Query: 302 VQVAEE 307
Q+AE+
Sbjct: 592 GQLAEK 597
>gi|47458041 solute carrier family 25 member 24 isoform 2 [Homo
sapiens]
Length = 458
Score = 33.9 bits (76), Expect = 0.26
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 39 TLFQDVFRRADKNDDGKLSFEEFQNYFAD--GVLSLGELQELFSGIDGHLTDNLETEKLC 96
+L+ D+F D N DG L E Q D + SL E +++F+ D + L+ E+
Sbjct: 3 SLYGDLFWYLDYNKDGTLDIFELQEGLEDVGAIQSLEEAKKIFTTGDVNKDGKLDFEEFM 62
Query: 97 DYFSEHLGVYRPVLAALESLNRAVLAAMD 125
Y +H + +L+ N + A +
Sbjct: 63 KYLKDHEKKMKLAFKSLDKNNDGKIEASE 91
>gi|239757232 PREDICTED: hypothetical protein [Homo sapiens]
Length = 461
Score = 33.5 bits (75), Expect = 0.34
Identities = 39/132 (29%), Positives = 51/132 (38%), Gaps = 18/132 (13%)
Query: 186 RLCGSRRAGRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVNRLQELIDQLECKVRAV 245
RLCG G + RS S S W+PG GR M ++ L + L V A
Sbjct: 310 RLCGKSPRGSQTARSSSPSRAWAPGWRQLGRGPATPM-----LHGLGPVPPPLWAAVSAS 364
Query: 246 -----GPGP----HKGGPSWYPPEPGPCWRPG---PHSVPSQAPRLEPLREEDLAKGPDL 293
GP P K G P+P C R G + +Q RL P R A+G L
Sbjct: 365 RWGGGGPQPLPQVSKEGSGLARPDPSCCVRAGLGAAKTPGAQGERLGP-RGTRRARGLQL 423
Query: 294 HILMAQRQVQVA 305
+ Q + + A
Sbjct: 424 RPVGGQSRREAA 435
>gi|239751740 PREDICTED: hypothetical protein [Homo sapiens]
Length = 461
Score = 33.5 bits (75), Expect = 0.34
Identities = 39/132 (29%), Positives = 51/132 (38%), Gaps = 18/132 (13%)
Query: 186 RLCGSRRAGRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVNRLQELIDQLECKVRAV 245
RLCG G + RS S S W+PG GR M ++ L + L V A
Sbjct: 310 RLCGKSPRGSQTARSSSPSRAWAPGWRQLGRGPATPM-----LHGLGPVPPPLWAAVSAS 364
Query: 246 -----GPGP----HKGGPSWYPPEPGPCWRPG---PHSVPSQAPRLEPLREEDLAKGPDL 293
GP P K G P+P C R G + +Q RL P R A+G L
Sbjct: 365 RWGGGGPQPLPQVSKEGSGLARPDPSCCVRAGLGAAKTPGAQGERLGP-RGTRRARGLQL 423
Query: 294 HILMAQRQVQVA 305
+ Q + + A
Sbjct: 424 RPVGGQSRREAA 435
>gi|239746241 PREDICTED: hypothetical protein XP_002343712 [Homo
sapiens]
Length = 461
Score = 33.5 bits (75), Expect = 0.34
Identities = 39/132 (29%), Positives = 51/132 (38%), Gaps = 18/132 (13%)
Query: 186 RLCGSRRAGRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVNRLQELIDQLECKVRAV 245
RLCG G + RS S S W+PG GR M ++ L + L V A
Sbjct: 310 RLCGKSPRGSQTARSSSPSRAWAPGWRQLGRGPATPM-----LHGLGPVPPPLWAAVSAS 364
Query: 246 -----GPGP----HKGGPSWYPPEPGPCWRPG---PHSVPSQAPRLEPLREEDLAKGPDL 293
GP P K G P+P C R G + +Q RL P R A+G L
Sbjct: 365 RWGGGGPQPLPQVSKEGSGLARPDPSCCVRAGLGAAKTPGAQGERLGP-RGTRRARGLQL 423
Query: 294 HILMAQRQVQVA 305
+ Q + + A
Sbjct: 424 RPVGGQSRREAA 435
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 33.5 bits (75), Expect = 0.34
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 18/98 (18%)
Query: 43 DVFRRADKNDDGKLSFEEFQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYF--- 99
D FRR DK+ DGK++ +E F DG+LS T LE + D F
Sbjct: 5147 DFFRRIDKDQDGKITRQE----FIDGILS-----------SKFPTSRLEMSAVADIFDRD 5191
Query: 100 SEHLGVYRPVLAALESLNRAVLAAMDATKLEYERASKV 137
+ Y +AAL A DA K+E E +V
Sbjct: 5192 GDGYIDYYEFVAALHPNKDAYKPITDADKIEDEVTRQV 5229
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 33.5 bits (75), Expect = 0.34
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 18/98 (18%)
Query: 43 DVFRRADKNDDGKLSFEEFQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYF--- 99
D FRR DK+ DGK++ +E F DG+LS T LE + D F
Sbjct: 5158 DFFRRIDKDQDGKITRQE----FIDGILS-----------SKFPTSRLEMSAVADIFDRD 5202
Query: 100 SEHLGVYRPVLAALESLNRAVLAAMDATKLEYERASKV 137
+ Y +AAL A DA K+E E +V
Sbjct: 5203 GDGYIDYYEFVAALHPNKDAYKPITDADKIEDEVTRQV 5240
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 33.5 bits (75), Expect = 0.34
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 18/98 (18%)
Query: 43 DVFRRADKNDDGKLSFEEFQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYF--- 99
D FRR DK+ DGK++ +E F DG+LS T LE + D F
Sbjct: 5296 DFFRRIDKDQDGKITRQE----FIDGILS-----------SKFPTSRLEMSAVADIFDRD 5340
Query: 100 SEHLGVYRPVLAALESLNRAVLAAMDATKLEYERASKV 137
+ Y +AAL A DA K+E E +V
Sbjct: 5341 GDGYIDYYEFVAALHPNKDAYKPITDADKIEDEVTRQV 5378
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 33.5 bits (75), Expect = 0.34
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 18/98 (18%)
Query: 43 DVFRRADKNDDGKLSFEEFQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYF--- 99
D FRR DK+ DGK++ +E F DG+LS T LE + D F
Sbjct: 5118 DFFRRIDKDQDGKITRQE----FIDGILS-----------SKFPTSRLEMSAVADIFDRD 5162
Query: 100 SEHLGVYRPVLAALESLNRAVLAAMDATKLEYERASKV 137
+ Y +AAL A DA K+E E +V
Sbjct: 5163 GDGYIDYYEFVAALHPNKDAYKPITDADKIEDEVTRQV 5200
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 33.5 bits (75), Expect = 0.34
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 18/98 (18%)
Query: 43 DVFRRADKNDDGKLSFEEFQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYF--- 99
D FRR DK+ DGK++ +E F DG+LS T LE + D F
Sbjct: 4792 DFFRRIDKDQDGKITRQE----FIDGILS-----------SKFPTSRLEMSAVADIFDRD 4836
Query: 100 SEHLGVYRPVLAALESLNRAVLAAMDATKLEYERASKV 137
+ Y +AAL A DA K+E E +V
Sbjct: 4837 GDGYIDYYEFVAALHPNKDAYKPITDADKIEDEVTRQV 4874
>gi|71040096 Rho GTPase activating protein 30 isoform 2 [Homo
sapiens]
Length = 890
Score = 33.5 bits (75), Expect = 0.34
Identities = 44/157 (28%), Positives = 58/157 (36%), Gaps = 40/157 (25%)
Query: 156 LQSSLEGASDTLEAQAHGWRSDAESVEAQSRLCGSRRAGRRALRSVSRSSTWSPGSSDTG 215
L SLE +D++EA +AE++ + G+ RAGR A+R + GSS
Sbjct: 356 LPESLE--NDSIEAAEGEQEPEAEALGGTNSEPGTPRAGRSAIR--------AGGSSRAE 405
Query: 216 RSSEAEMQWRLQVN-------------------RLQELIDQLECKVRAVGPGPHKGGPSW 256
R + + VN L L LEC P P G
Sbjct: 406 RCAGVHISDPYNVNLPLHITSILSVPPNIISNVSLARLTRGLECPALQHRPSPASG---- 461
Query: 257 YPPEPGPCWRPGPHSVPSQA-PRLEPLREEDLAKGPD 292
P PGP PGP +A P PL + GPD
Sbjct: 462 --PGPGPGLGPGPPDEKLEASPASSPLAD----SGPD 492
>gi|71040098 Rho GTPase activating protein 30 isoform 1 [Homo
sapiens]
Length = 1101
Score = 33.5 bits (75), Expect = 0.34
Identities = 44/157 (28%), Positives = 58/157 (36%), Gaps = 40/157 (25%)
Query: 156 LQSSLEGASDTLEAQAHGWRSDAESVEAQSRLCGSRRAGRRALRSVSRSSTWSPGSSDTG 215
L SLE +D++EA +AE++ + G+ RAGR A+R + GSS
Sbjct: 356 LPESLE--NDSIEAAEGEQEPEAEALGGTNSEPGTPRAGRSAIR--------AGGSSRAE 405
Query: 216 RSSEAEMQWRLQVN-------------------RLQELIDQLECKVRAVGPGPHKGGPSW 256
R + + VN L L LEC P P G
Sbjct: 406 RCAGVHISDPYNVNLPLHITSILSVPPNIISNVSLARLTRGLECPALQHRPSPASG---- 461
Query: 257 YPPEPGPCWRPGPHSVPSQA-PRLEPLREEDLAKGPD 292
P PGP PGP +A P PL + GPD
Sbjct: 462 --PGPGPGLGPGPPDEKLEASPASSPLAD----SGPD 492
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 33.1 bits (74), Expect = 0.45
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 18/100 (18%)
Query: 43 DVFRRADKNDDGKLSFEEFQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYF--- 99
D FRR DK+ DGK++ +E F DG+L+ T LE + D F
Sbjct: 5592 DFFRRIDKDQDGKITRQE----FIDGILA-----------SKFPTTKLEMTAVADIFDRD 5636
Query: 100 SEHLGVYRPVLAALESLNRAVLAAMDATKLEYERASKVDQ 139
+ Y +AAL A DA K+E E +V Q
Sbjct: 5637 GDGYIDYYEFVAALHPNKDAYRPTTDADKIEDEVTRQVAQ 5676
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 33.1 bits (74), Expect = 0.45
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 18/100 (18%)
Query: 43 DVFRRADKNDDGKLSFEEFQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYF--- 99
D FRR DK+ DGK++ +E F DG+L+ T LE + D F
Sbjct: 5090 DFFRRIDKDQDGKITRQE----FIDGILA-----------SKFPTTKLEMTAVADIFDRD 5134
Query: 100 SEHLGVYRPVLAALESLNRAVLAAMDATKLEYERASKVDQ 139
+ Y +AAL A DA K+E E +V Q
Sbjct: 5135 GDGYIDYYEFVAALHPNKDAYRPTTDADKIEDEVTRQVAQ 5174
>gi|148539855 epidermal growth factor receptor pathway substrate
8-like protein 1 isoform b [Homo sapiens]
Length = 596
Score = 33.1 bits (74), Expect = 0.45
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 242 VRAVGPGPHKGGPSWYP-PEPGPCWRPGPHSVPSQAPRLEPLREEDLA-KGPDLHILMAQ 299
+ V G +G P P PE RP P S A P DL +GPDL +L A+
Sbjct: 73 ISTVERGAGRGRPQAKPIPEAEEAQRPEPVGTSSNADSASP----DLGPRGPDLAVLQAE 128
Query: 300 RQVQVAEEGLQD 311
R+V + D
Sbjct: 129 REVDILNHVFDD 140
>gi|148539853 epidermal growth factor receptor pathway substrate
8-like protein 1 isoform a [Homo sapiens]
Length = 723
Score = 33.1 bits (74), Expect = 0.45
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 242 VRAVGPGPHKGGPSWYP-PEPGPCWRPGPHSVPSQAPRLEPLREEDLA-KGPDLHILMAQ 299
+ V G +G P P PE RP P S A P DL +GPDL +L A+
Sbjct: 200 ISTVERGAGRGRPQAKPIPEAEEAQRPEPVGTSSNADSASP----DLGPRGPDLAVLQAE 255
Query: 300 RQVQVAEEGLQD 311
R+V + D
Sbjct: 256 REVDILNHVFDD 267
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 32.3 bits (72), Expect = 0.77
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 19/110 (17%)
Query: 100 SEHLGVYRPVLAALESLNRAVLAAMDATKLEYERAS-------------------KVDQF 140
SE G +LA LE NR + A D K ++E +
Sbjct: 3492 SEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELI 3551
Query: 141 VTRFLLRETVSQLQALQSSLEGASDTLEAQAHGWRSDAESVEAQSRLCGS 190
LLR+ +L+A LE + LE+Q H R E +A++++ G+
Sbjct: 3552 AEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGT 3601
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,029,885
Number of Sequences: 37866
Number of extensions: 982736
Number of successful extensions: 8763
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 130
Number of HSP's that attempted gapping in prelim test: 7950
Number of HSP's gapped (non-prelim): 928
length of query: 396
length of database: 18,247,518
effective HSP length: 104
effective length of query: 292
effective length of database: 14,309,454
effective search space: 4178360568
effective search space used: 4178360568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.