Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: EPS8L1 Sequence: fasta or formatted (596aa) NCBI GI: 148539855
Description:

epidermal growth factor receptor pathway substrate 8-like protein 1 isoform b

Referenced in:

Epidermal Growth Factor

Other entries for this name:
alt prot [723aa] epidermal growth factor receptor pathway substrate 8-like protein...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         54           3
 C cysteine            0.3          2           1
 D aspartate           4.9         29           2
 E glutamate          10.1         60           2
 F phenylalanine       2.0         12           2
 G glycine             6.2         37           2
 H histidine           1.5          9           2
 I isoleucine          2.0         12           1
 K lysine              3.4         20           3
 L leucine             9.2         55           2
 M methionine          0.8          5           1
 N asparagine          2.5         15           1
 P proline             9.9         59           5
 Q glutamine           5.4         32           2
 R arginine           10.4         62           4
 S serine              9.1         54           2
 T threonine           3.2         19           1
 V valine              6.5         39           1
 W tryptophan          2.0         12           2
 Y tyrosine            1.5          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   epidermal growth factor receptor pathway substrate ... 
EPS8L1                0.969   epidermal growth factor receptor pathway substrate ...
EPS8L2                0.274   epidermal growth factor receptor pathway substrate 8...
EPS8                  0.273   epidermal growth factor receptor pathway substrate 8...
EPS8L3                0.129   epidermal growth factor receptor pathway substrate 8...
EPS8L3                0.129   epidermal growth factor receptor pathway substrate 8...
EPS8L3                0.122   epidermal growth factor receptor pathway substrate 8...
NCK2                  0.024   NCK adaptor protein 2 isoform B 
NCK2                  0.024   NCK adaptor protein 2 isoform A 
NCK2                  0.024   NCK adaptor protein 2 isoform A 
BTK                   0.023   Bruton agammaglobulinemia tyrosine kinase 
NCK1                  0.021   NCK adaptor protein 1 
TEC                   0.019   tec protein tyrosine kinase 
STAM2                 0.019   signal transducing adaptor molecule 2 
SPTAN1                0.017   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
SPTAN1                0.017   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
NPHP1                 0.017   nephrocystin 1 isoform 4 
NPHP1                 0.017   nephrocystin 1 isoform 3 
NPHP1                 0.017   nephrocystin 1 isoform 2 
NPHP1                 0.017   nephrocystin 1 isoform 1 
ITK                   0.016   IL2-inducible T-cell kinase 
HCK                   0.016   hemopoietic cell kinase isoform p61HCK 
SNX18                 0.015   sorting nexin 18 isoform c 
SNX18                 0.015   sorting nexin 18 isoform a 
SNX18                 0.015   sorting nexin 18 isoform b 
PPP1R13B              0.015   apoptosis-stimulating protein of p53, 1 
GRAP2                 0.014   GRB2-related adaptor protein 2 
BLK                   0.014   B lymphoid tyrosine kinase 
SPTA1                 0.014   spectrin, alpha, erythrocytic 1 
KIAA1598              0.014   shootin1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press