Guide to the Human Genome
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Name: FARSB Sequence: fasta or formatted (589aa) NCBI GI: 124028525
Description:

phenylalanyl-tRNA synthetase, beta subunit

Referenced in:

Leucine-rich Repeat Family
tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         44           3
 C cysteine            1.9         11           1
 D aspartate           5.8         34           1
 E glutamate           7.1         42           2
 F phenylalanine       4.6         27           2
 G glycine             5.4         32           2
 H histidine           2.2         13           1
 I isoleucine          8.8         52           2
 K lysine              7.8         46           2
 L leucine             9.7         57           2
 M methionine          2.0         12           1
 N asparagine          4.8         28           2
 P proline             5.3         31           2
 Q glutamine           2.4         14           1
 R arginine            4.4         26           1
 S serine              3.7         22           2
 T threonine           6.6         39           2
 V valine              6.5         38           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.6         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phenylalanyl-tRNA synthetase, beta subunit 
LRRC47                0.065   leucine rich repeat containing 47 
SMCHD1                0.008   structural maintenance of chromosomes flexible hing...
SNX26                 0.006   sorting nexin 26 
EARS2                 0.006   glutamyl-tRNA synthetase 2 
NUP210L               0.005   nucleoporin 210kDa-like isoform 2 
NUP210L               0.005   nucleoporin 210kDa-like isoform 1 
KDM5C                 0.004   jumonji, AT rich interactive domain 1C isoform 2 [H...
KDM5C                 0.004   jumonji, AT rich interactive domain 1C isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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