Guide to the Human Genome
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Name: NLRP7 Sequence: fasta or formatted (1037aa) NCBI GI: 187937176
Description:

NACHT, leucine rich repeat and PYD containing 7 isoform 3

Referenced in:

Pyrin and Associated Functions

Other entries for this name:
alt prot [1009aa] NACHT, leucine rich repeat and PYD containing 7 isoform 1
alt prot [980aa] NACHT, leucine rich repeat and PYD containing 7 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         63           2
 C cysteine            3.9         40           2
 D aspartate           5.3         55           2
 E glutamate           7.5         78           3
 F phenylalanine       4.3         45           2
 G glycine             4.8         50           2
 H histidine           2.3         24           1
 I isoleucine          3.6         37           2
 K lysine              6.7         69           3
 L leucine            16.1        167           2
 M methionine          2.2         23           2
 N asparagine          3.8         39           1
 P proline             3.9         40           2
 Q glutamine           5.0         52           2
 R arginine            5.1         53           2
 S serine              5.9         61           2
 T threonine           5.3         55           2
 V valine              4.6         48           3
 W tryptophan          1.9         20           1
 Y tyrosine            1.7         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NACHT, leucine rich repeat and PYD containing 7 iso... 
NLRP7                 0.963   NACHT, leucine rich repeat and PYD containing 7 isof...
NLRP7                 0.902   NACHT, leucine rich repeat and PYD containing 7 isof...
NLRP2                 0.573   NLR family, pyrin domain containing 2 
NLRP14                0.265   NLR family, pyrin domain containing 14 
NLRP4                 0.215   NLR family, pyrin domain containing 4 
NLRP13                0.212   NACHT, leucine rich repeat and PYD containing 13 [H...
NLRP8                 0.209   NLR family, pyrin domain containing 8 
NLRP9                 0.205   NLR family, pyrin domain containing 9 
NLRP12                0.201   NLR family, pyrin domain containing 12 isoform 2 [Ho...
NLRP3                 0.196   NLR family, pyrin domain containing 3 isoform a [Ho...
NLRP3                 0.196   NLR family, pyrin domain containing 3 isoform a [Hom...
NLRP5                 0.190   NACHT, LRR and PYD containing protein 5 
NLRP3                 0.177   NLR family, pyrin domain containing 3 isoform d [Ho...
NLRP3                 0.176   NLR family, pyrin domain containing 3 isoform c [Ho...
NLRP11                0.161   NLR family, pyrin domain containing 11 
NLRP3                 0.160   NLR family, pyrin domain containing 3 isoform b [Hom...
NLRP1                 0.140   NLR family, pyrin domain containing 1 isoform 2 [Homo...
NLRP1                 0.140   NLR family, pyrin domain containing 1 isoform 5 [Hom...
NLRP1                 0.140   NLR family, pyrin domain containing 1 isoform 1 [Hom...
NLRP1                 0.138   NLR family, pyrin domain containing 1 isoform 4 [Hom...
NLRP1                 0.138   NLR family, pyrin domain containing 1 isoform 3 [Hom...
NLRP6                 0.105   NLR family, pyrin domain containing 6 
NLRP10                0.093   NLR family, pyrin domain containing 10 
RNH1                  0.058   ribonuclease/angiogenin inhibitor 
RNH1                  0.058   ribonuclease/angiogenin inhibitor 
RNH1                  0.058   ribonuclease/angiogenin inhibitor 
RNH1                  0.058   ribonuclease/angiogenin inhibitor 
RNH1                  0.058   ribonuclease/angiogenin inhibitor 
RNH1                  0.058   ribonuclease/angiogenin inhibitor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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