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Search of human proteins with 148664230
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148664230 ankyrin repeat and LEM domain containing 2 [Homo
sapiens]
(938 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148664230 ankyrin repeat and LEM domain containing 2 [Homo sa... 1901 0.0
gi|73760401 thymopoietin isoform gamma [Homo sapiens] 39 0.030
gi|73760405 thymopoietin isoform beta [Homo sapiens] 39 0.030
gi|4507555 thymopoietin isoform alpha [Homo sapiens] 39 0.030
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 38 0.039
gi|50511945 cajalin 2 isoform a [Homo sapiens] 36 0.15
gi|157266328 BRCA1 associated RING domain 1 [Homo sapiens] 35 0.25
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 35 0.25
gi|61742817 krev interaction trapped 1 isoform 2 [Homo sapiens] 35 0.33
gi|13376842 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 35 0.33
gi|62177127 myosin heavy chain Myr 8 [Homo sapiens] 35 0.33
gi|119120903 par-3 partitioning defective 3 homolog B isoform c ... 35 0.43
gi|119120897 par-3 partitioning defective 3 homolog B isoform b ... 35 0.43
gi|37221184 krev interaction trapped 1 isoform 1 [Homo sapiens] 34 0.56
gi|37221182 krev interaction trapped 1 isoform 1 [Homo sapiens] 34 0.56
gi|37221187 krev interaction trapped 1 isoform 1 [Homo sapiens] 34 0.56
gi|31581522 krev interaction trapped 1 isoform 1 [Homo sapiens] 34 0.56
gi|7661844 coiled-coil domain containing 22 [Homo sapiens] 34 0.56
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 34 0.56
gi|222537714 taxilin beta [Homo sapiens] 34 0.73
gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens] 34 0.73
gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens] 34 0.73
gi|24307873 zinc finger protein 651 [Homo sapiens] 34 0.73
gi|56676324 LEM domain containing 1 [Homo sapiens] 33 0.95
gi|4506321 protein tyrosine phosphatase, receptor type, N precur... 33 0.95
gi|169173314 PREDICTED: hypothetical protein LOC286177 [Homo sap... 33 1.2
gi|215598574 ankyrin 1 isoform 9 [Homo sapiens] 33 1.2
gi|70780359 ankyrin 1 isoform 1 [Homo sapiens] 33 1.2
gi|70780357 ankyrin 1 isoform 3 [Homo sapiens] 33 1.2
gi|70780355 ankyrin 1 isoform 2 [Homo sapiens] 33 1.2
>gi|148664230 ankyrin repeat and LEM domain containing 2 [Homo
sapiens]
Length = 938
Score = 1901 bits (4925), Expect = 0.0
Identities = 938/938 (100%), Positives = 938/938 (100%)
Query: 1 MLWPRLAAAEWAALAWELLGASVLLIAVRWLVRRLGPRPGGLGRSGTPVPPPSAAAAPAS 60
MLWPRLAAAEWAALAWELLGASVLLIAVRWLVRRLGPRPGGLGRSGTPVPPPSAAAAPAS
Sbjct: 1 MLWPRLAAAEWAALAWELLGASVLLIAVRWLVRRLGPRPGGLGRSGTPVPPPSAAAAPAS 60
Query: 61 GEMTMDALLARLKLLNPDDLREEIVKAGLKCGPITSTTRFIFEKKLAQALLEQGGRLSSF 120
GEMTMDALLARLKLLNPDDLREEIVKAGLKCGPITSTTRFIFEKKLAQALLEQGGRLSSF
Sbjct: 61 GEMTMDALLARLKLLNPDDLREEIVKAGLKCGPITSTTRFIFEKKLAQALLEQGGRLSSF 120
Query: 121 YHHEAGVTALSQDPQRILKPAEGNPTDQAGFSEDRDFGYSVGLNPPEEEAVTSKTCSVPP 180
YHHEAGVTALSQDPQRILKPAEGNPTDQAGFSEDRDFGYSVGLNPPEEEAVTSKTCSVPP
Sbjct: 121 YHHEAGVTALSQDPQRILKPAEGNPTDQAGFSEDRDFGYSVGLNPPEEEAVTSKTCSVPP 180
Query: 181 SDTDTYRAGATASKEPPLYYGVCPVYEDVPARNERIYVYENKKEALQAVKMIKGSRFKAF 240
SDTDTYRAGATASKEPPLYYGVCPVYEDVPARNERIYVYENKKEALQAVKMIKGSRFKAF
Sbjct: 181 SDTDTYRAGATASKEPPLYYGVCPVYEDVPARNERIYVYENKKEALQAVKMIKGSRFKAF 240
Query: 241 STREDAEKFARGICDYFPSPSKTSLPLSPVKTAPLFSNDRLKDGLCLSESETVNKERANS 300
STREDAEKFARGICDYFPSPSKTSLPLSPVKTAPLFSNDRLKDGLCLSESETVNKERANS
Sbjct: 241 STREDAEKFARGICDYFPSPSKTSLPLSPVKTAPLFSNDRLKDGLCLSESETVNKERANS 300
Query: 301 YKNPRTQDLTAKLRKAVEKGEEDTFSDLIWSNPRYLIGSGDNPTIVQEGCRYNVMHVAAK 360
YKNPRTQDLTAKLRKAVEKGEEDTFSDLIWSNPRYLIGSGDNPTIVQEGCRYNVMHVAAK
Sbjct: 301 YKNPRTQDLTAKLRKAVEKGEEDTFSDLIWSNPRYLIGSGDNPTIVQEGCRYNVMHVAAK 360
Query: 361 ENQASICQLTLDVLENPDFMRLMYPDDDEAMLQKRIRYVVDLYLNTPDKMGYDTPLHFAC 420
ENQASICQLTLDVLENPDFMRLMYPDDDEAMLQKRIRYVVDLYLNTPDKMGYDTPLHFAC
Sbjct: 361 ENQASICQLTLDVLENPDFMRLMYPDDDEAMLQKRIRYVVDLYLNTPDKMGYDTPLHFAC 420
Query: 421 KFGNADVVNVLSSHHLIVKNSRNKYDKTPEDVICERSKNKSVELKERIREYLKGHYYVPL 480
KFGNADVVNVLSSHHLIVKNSRNKYDKTPEDVICERSKNKSVELKERIREYLKGHYYVPL
Sbjct: 421 KFGNADVVNVLSSHHLIVKNSRNKYDKTPEDVICERSKNKSVELKERIREYLKGHYYVPL 480
Query: 481 LRAEETSSPVIGELWSPDQTAEASHVSRYGGSPRDPVLTLRAFAGPLSPAKAEDFRKLWK 540
LRAEETSSPVIGELWSPDQTAEASHVSRYGGSPRDPVLTLRAFAGPLSPAKAEDFRKLWK
Sbjct: 481 LRAEETSSPVIGELWSPDQTAEASHVSRYGGSPRDPVLTLRAFAGPLSPAKAEDFRKLWK 540
Query: 541 TPPREKAGFLHHVKKSDPERGFERVGRELAHELGYPWVEYWEFLGCFVDLSSQEGLQRLE 600
TPPREKAGFLHHVKKSDPERGFERVGRELAHELGYPWVEYWEFLGCFVDLSSQEGLQRLE
Sbjct: 541 TPPREKAGFLHHVKKSDPERGFERVGRELAHELGYPWVEYWEFLGCFVDLSSQEGLQRLE 600
Query: 601 EYLTQQEIGKKAQQETGEREASCRDKATTSGSNSISVRAFLDEDDMSLEEIKNRQNAARN 660
EYLTQQEIGKKAQQETGEREASCRDKATTSGSNSISVRAFLDEDDMSLEEIKNRQNAARN
Sbjct: 601 EYLTQQEIGKKAQQETGEREASCRDKATTSGSNSISVRAFLDEDDMSLEEIKNRQNAARN 660
Query: 661 NSPPTVGAFGHTRCSAFPLEQEADLIEAAEPGGPHSSRNGLCHPLNHSRTLAGKRPKAPR 720
NSPPTVGAFGHTRCSAFPLEQEADLIEAAEPGGPHSSRNGLCHPLNHSRTLAGKRPKAPR
Sbjct: 661 NSPPTVGAFGHTRCSAFPLEQEADLIEAAEPGGPHSSRNGLCHPLNHSRTLAGKRPKAPR 720
Query: 721 GEEAHLPPVSDLTVEFDKLNLQNIGRSVSKTPDESTKTKDQILTSRINAVERDLLEPSPA 780
GEEAHLPPVSDLTVEFDKLNLQNIGRSVSKTPDESTKTKDQILTSRINAVERDLLEPSPA
Sbjct: 721 GEEAHLPPVSDLTVEFDKLNLQNIGRSVSKTPDESTKTKDQILTSRINAVERDLLEPSPA 780
Query: 781 DQLGNGHRRTESEMSARIAKMSLSPSSPRHEDQLEVTREPARRLFLFGEEPSKLDQDVLA 840
DQLGNGHRRTESEMSARIAKMSLSPSSPRHEDQLEVTREPARRLFLFGEEPSKLDQDVLA
Sbjct: 781 DQLGNGHRRTESEMSARIAKMSLSPSSPRHEDQLEVTREPARRLFLFGEEPSKLDQDVLA 840
Query: 841 ALECADVDPHQFPAVHRWKSAVLCYSPSDRQSWPSPAVKGRFKSQLPDLSGPHSYSPGRN 900
ALECADVDPHQFPAVHRWKSAVLCYSPSDRQSWPSPAVKGRFKSQLPDLSGPHSYSPGRN
Sbjct: 841 ALECADVDPHQFPAVHRWKSAVLCYSPSDRQSWPSPAVKGRFKSQLPDLSGPHSYSPGRN 900
Query: 901 SVAGSNPAKPGLGSPGRYSPVHGSQLRRMARLAELAAL 938
SVAGSNPAKPGLGSPGRYSPVHGSQLRRMARLAELAAL
Sbjct: 901 SVAGSNPAKPGLGSPGRYSPVHGSQLRRMARLAELAAL 938
>gi|73760401 thymopoietin isoform gamma [Homo sapiens]
Length = 345
Score = 38.5 bits (88), Expect = 0.030
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 75 LNPDDLREEIVKAGLKCGPITSTTRFIFEKKLAQALLEQG 114
L +DL +++VK G+ GPI TTR ++EKKL + L EQG
Sbjct: 115 LTNEDLLDQLVKYGVNPGPIVGTTRKLYEKKLLK-LREQG 153
>gi|73760405 thymopoietin isoform beta [Homo sapiens]
Length = 454
Score = 38.5 bits (88), Expect = 0.030
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 75 LNPDDLREEIVKAGLKCGPITSTTRFIFEKKLAQALLEQG 114
L +DL +++VK G+ GPI TTR ++EKKL + L EQG
Sbjct: 115 LTNEDLLDQLVKYGVNPGPIVGTTRKLYEKKLLK-LREQG 153
>gi|4507555 thymopoietin isoform alpha [Homo sapiens]
Length = 694
Score = 38.5 bits (88), Expect = 0.030
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 75 LNPDDLREEIVKAGLKCGPITSTTRFIFEKKLAQALLEQG 114
L +DL +++VK G+ GPI TTR ++EKKL + L EQG
Sbjct: 115 LTNEDLLDQLVKYGVNPGPIVGTTRKLYEKKLLK-LREQG 153
>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
Length = 4377
Score = 38.1 bits (87), Expect = 0.039
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 403 YLNTPDKMGYDTPLHFACKFGNADVVNVLSSHHLIVKNSRNKYDKTP 449
+++ KMGY TPLH C +GN +VN L H V N++ K TP
Sbjct: 722 HVDAQTKMGY-TPLHVGCHYGNIKIVNFLLQHSAKV-NAKTKNGYTP 766
>gi|50511945 cajalin 2 isoform a [Homo sapiens]
Length = 1248
Score = 36.2 bits (82), Expect = 0.15
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 416 LHFACKFGNADVVNVLSSHHLIVKNSRNKYDKTPEDVICERSKNKSVELKERIREYLKG 474
LH A FG DVV VL I N ++ +T D++ E KS+++ ++EYL+G
Sbjct: 230 LHEAALFGKVDVVRVLLETG-IDANIKDSLGRTVLDILKEHPSQKSLQIATLLQEYLEG 287
>gi|157266328 BRCA1 associated RING domain 1 [Homo sapiens]
Length = 777
Score = 35.4 bits (80), Expect = 0.25
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 405 NTPDKMGYDTPLHFACKFGNADVVNVLSSHHLIVKNSRNKYDKTPEDVICERSKNKSVEL 464
N D G+ TPLH AC G+ VV +L H +V + + D D +KN V++
Sbjct: 455 NVKDHAGW-TPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDA----AKNGHVDI 509
Query: 465 KERIREYLKGHYYV------PLLRAEETSSPVIGELWSPDQTAEASHVSRYG-GSPRDPV 517
+ + Y V P+ ++ S + L ++++ ASH S G RD
Sbjct: 510 VKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSSASHCSVMNTGQRRDGP 569
Query: 518 LTL 520
L L
Sbjct: 570 LVL 572
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 35.4 bits (80), Expect = 0.25
Identities = 45/191 (23%), Positives = 75/191 (39%), Gaps = 24/191 (12%)
Query: 305 RTQDLTAKLRKAVEKGEEDTFSDLIWSNPRYLIGSGDNPTI-VQEGCRYNVMHVAAKENQ 363
R QDL ++ G + + + + + L+GS + Q+ ++ +H AA
Sbjct: 3 REQDLILAVKNGDVTGVQKLVAKVKATKTK-LLGSTKRLNVNYQDADGFSALHHAALGGS 61
Query: 364 ASI------CQLTLDVLENPDFMRLMYPDDDEAMLQKRIRYVVDLYLNTPDKMGYDTPLH 417
+ Q T+D+ ++ L Y + R+ +N G PLH
Sbjct: 62 LELIALLLEAQATVDIKDSNGMRPLHYAAWQGRLEPVRLLLRASAAVNAASLDG-QIPLH 120
Query: 418 FACKFGNADVVNVLSSHH----LIVKNSRNKYDKTPEDVICERSKNKSVELKERIREYLK 473
A ++G+ +V +L H L+ NK KTP D+ CE + K +L L
Sbjct: 121 LAAQYGHYEVSEMLLQHQSNPCLV-----NKAKKTPLDLACEFGRLKVAQL------LLN 169
Query: 474 GHYYVPLLRAE 484
H V LL E
Sbjct: 170 SHLCVALLEGE 180
>gi|61742817 krev interaction trapped 1 isoform 2 [Homo sapiens]
Length = 688
Score = 35.0 bits (79), Expect = 0.33
Identities = 67/314 (21%), Positives = 114/314 (36%), Gaps = 67/314 (21%)
Query: 217 YVYENKKEALQAVKMIKGSR---FKAFSTREDAEKFARGICDYF-PSPSKTSLPLSPVKT 272
YV E K A + I+G R K F D EK R + PS K + +
Sbjct: 71 YVVETTKPISPANQGIRGKRVVLMKKFPL--DGEKMGREASLFIVPSVVKDNTKYTYTPG 128
Query: 273 APLFSNDRLKDGLCLSESETVNKERANSYKNPRTQDLTAKLRKAVEKGEEDTFSDLIWS- 331
P+F CL + V E + + + L A + E+ + F ++
Sbjct: 129 CPIF--------YCLQDIMRVCSESSTHFATLTARMLIALDKWLDERHAQSHFIPALFRP 180
Query: 332 -----------NPRYLIGSGDNPTIVQEGCRYNVMHVAAKE---NQASIC---------- 367
NP Y SG + G Y+ + + +K +A C
Sbjct: 181 SPLERIKTNVINPAYATESGQTENSLHMG--YSALEIKSKMLALEKADTCIYNPLFGSDL 238
Query: 368 QLTL---DVLENPDFMRLMYPDDDEAMLQKRIRYVVDLYLNTPDKMG------------- 411
Q T V+ NP F L PD + + K+ ++ + T DK G
Sbjct: 239 QYTNRVDKVVINPYF-GLGAPDYSKIQIPKQEKWQRSMSSVTEDKYGKVEATRILLEKGK 297
Query: 412 ---------YDTPLHFACKFGNADVVNVLSSHHLIVKNSRNKYDKTPEDVICERSKNKSV 462
+PLHFA G+A++V +L +H ++ ++ ++P ++ E +N
Sbjct: 298 CNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRSPLNICEENKQNNWE 357
Query: 463 ELKERIREYLKGHY 476
E + ++E + Y
Sbjct: 358 EAAKLLKEAINKPY 371
>gi|13376842 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase 2 [Homo sapiens]
Length = 1166
Score = 35.0 bits (79), Expect = 0.33
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 415 PLHFACKFGNADVVNVLSSHHLIVKNSRNKYDKTP 449
PLH AC FG+A+VVN+L H N+R+ ++ TP
Sbjct: 94 PLHNACSFGHAEVVNLLLRHG-ADPNARDNWNYTP 127
>gi|62177127 myosin heavy chain Myr 8 [Homo sapiens]
Length = 1858
Score = 35.0 bits (79), Expect = 0.33
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 412 YDTPLHFACKFGNADVVNVLSSH----HLIVKNSRNKYDKTPEDVICERSKNKSVELKER 467
Y TPLH A K+G ++V +L H HL+ N D + I E + +E+
Sbjct: 255 YWTPLHLAAKYGQTNLVKLLLMHQANPHLVNCNEEKASDIAASEFIEEMLLKAEIAWEEK 314
Query: 468 IREYLKGHYYVPLLRAEETSSPVIGEL 494
++E L L EE +I +L
Sbjct: 315 MKEPLS----ASTLAQEEPYEEIIHDL 337
>gi|119120903 par-3 partitioning defective 3 homolog B isoform c
[Homo sapiens]
Length = 1136
Score = 34.7 bits (78), Expect = 0.43
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 20/121 (16%)
Query: 593 QEGLQRLEEYLTQQEIGKKAQQETGEREASCRDKATTSGSNSISVRAFLDEDDMS----- 647
+E L++++E ++ IG K Q+ ++ D AT +I +D+D+M
Sbjct: 833 EEELEKMKE--ERERIGAKHQELREKQARGLLDYAT----GAIGSVYDMDDDEMDPNYAR 886
Query: 648 ---LEEIKNRQNAARNNSPPTVGAFGHTRCSAFPLEQEADLIEAAEPGGPHSSRNGLCHP 704
E N R+ SPP G FG+ R PL E D +E G ++ N HP
Sbjct: 887 VNHFREPCTSANVFRSPSPPRAGPFGYPR-DGHPLSPERDHLE-----GLYAKVNKPYHP 940
Query: 705 L 705
L
Sbjct: 941 L 941
>gi|119120897 par-3 partitioning defective 3 homolog B isoform b
[Homo sapiens]
Length = 1143
Score = 34.7 bits (78), Expect = 0.43
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 20/121 (16%)
Query: 593 QEGLQRLEEYLTQQEIGKKAQQETGEREASCRDKATTSGSNSISVRAFLDEDDMS----- 647
+E L++++E ++ IG K Q+ ++ D AT +I +D+D+M
Sbjct: 840 EEELEKMKE--ERERIGAKHQELREKQARGLLDYAT----GAIGSVYDMDDDEMDPNYAR 893
Query: 648 ---LEEIKNRQNAARNNSPPTVGAFGHTRCSAFPLEQEADLIEAAEPGGPHSSRNGLCHP 704
E N R+ SPP G FG+ R PL E D +E G ++ N HP
Sbjct: 894 VNHFREPCTSANVFRSPSPPRAGPFGYPR-DGHPLSPERDHLE-----GLYAKVNKPYHP 947
Query: 705 L 705
L
Sbjct: 948 L 948
>gi|37221184 krev interaction trapped 1 isoform 1 [Homo sapiens]
Length = 736
Score = 34.3 bits (77), Expect = 0.56
Identities = 16/63 (25%), Positives = 35/63 (55%)
Query: 414 TPLHFACKFGNADVVNVLSSHHLIVKNSRNKYDKTPEDVICERSKNKSVELKERIREYLK 473
+PLHFA G+A++V +L +H ++ ++ ++P ++ E +N E + ++E +
Sbjct: 357 SPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRSPLNICEENKQNNWEEAAKLLKEAIN 416
Query: 474 GHY 476
Y
Sbjct: 417 KPY 419
>gi|37221182 krev interaction trapped 1 isoform 1 [Homo sapiens]
Length = 736
Score = 34.3 bits (77), Expect = 0.56
Identities = 16/63 (25%), Positives = 35/63 (55%)
Query: 414 TPLHFACKFGNADVVNVLSSHHLIVKNSRNKYDKTPEDVICERSKNKSVELKERIREYLK 473
+PLHFA G+A++V +L +H ++ ++ ++P ++ E +N E + ++E +
Sbjct: 357 SPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRSPLNICEENKQNNWEEAAKLLKEAIN 416
Query: 474 GHY 476
Y
Sbjct: 417 KPY 419
>gi|37221187 krev interaction trapped 1 isoform 1 [Homo sapiens]
Length = 736
Score = 34.3 bits (77), Expect = 0.56
Identities = 16/63 (25%), Positives = 35/63 (55%)
Query: 414 TPLHFACKFGNADVVNVLSSHHLIVKNSRNKYDKTPEDVICERSKNKSVELKERIREYLK 473
+PLHFA G+A++V +L +H ++ ++ ++P ++ E +N E + ++E +
Sbjct: 357 SPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRSPLNICEENKQNNWEEAAKLLKEAIN 416
Query: 474 GHY 476
Y
Sbjct: 417 KPY 419
>gi|31581522 krev interaction trapped 1 isoform 1 [Homo sapiens]
Length = 736
Score = 34.3 bits (77), Expect = 0.56
Identities = 16/63 (25%), Positives = 35/63 (55%)
Query: 414 TPLHFACKFGNADVVNVLSSHHLIVKNSRNKYDKTPEDVICERSKNKSVELKERIREYLK 473
+PLHFA G+A++V +L +H ++ ++ ++P ++ E +N E + ++E +
Sbjct: 357 SPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRSPLNICEENKQNNWEEAAKLLKEAIN 416
Query: 474 GHY 476
Y
Sbjct: 417 KPY 419
>gi|7661844 coiled-coil domain containing 22 [Homo sapiens]
Length = 627
Score = 34.3 bits (77), Expect = 0.56
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 42 LGRSGTPVPPPSAAAAPASGEMTMDALLARLKLLNPDDLREEIVKAGLK-CGPITSTTRF 100
L ++GT VPP + E+ ++A++ L+++NP V +GL P+ + RF
Sbjct: 12 LRQAGTAVPPDVQTLRAFTTELVVEAVVRCLRVINP------AVGSGLSPLLPLAMSARF 65
Query: 101 IFEKKLAQALLEQG-----GRLSSFYHHEAGVTALSQDPQRILKPAEGNPTDQAGFSEDR 155
LAQA ++ G G + Y E + L +L AE PTD SED
Sbjct: 66 RLAMSLAQACMDLGYPLELGYQNFLYPSEPDLRDL------LLFLAERLPTDA---SEDA 116
Query: 156 D 156
D
Sbjct: 117 D 117
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 34.3 bits (77), Expect = 0.56
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 415 PLHFACKFGNADVVNVLSSHH----LIVKNSRNKYDKTPEDVICERSKNKSVELKERIRE 470
PLH A ++G+ +V +L H L+ NK KTP D+ CE + K +L
Sbjct: 36 PLHLAAQYGHYEVSEMLLQHQSNPCLV-----NKAKKTPLDLACEFGRLKVAQL------ 84
Query: 471 YLKGHYYVPLLRAE 484
L H V LL E
Sbjct: 85 LLNSHLCVALLEGE 98
>gi|222537714 taxilin beta [Homo sapiens]
Length = 684
Score = 33.9 bits (76), Expect = 0.73
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 13/129 (10%)
Query: 706 NHSRTLAGKRPKAPRGEEAHLPPVSDLTVEFDKLNLQNIGRSVSKTPDESTKTKDQILTS 765
NHS L+ +R P G+ + LP + L +K + Q+ V E++ D ++
Sbjct: 4 NHSEQLSAERQSTPPGDSSSLPSHNGL----EKEDGQDSPTPVQPPEKEASVHPD--ISE 57
Query: 766 RINAVERDLLEPSPADQLGNGHRRTESEMSARIAKMSLSPSSPRHEDQ--LEVTREPARR 823
+N D++ + G+ E SAR ++ + SP +ED E T E R
Sbjct: 58 ELNRQLEDII-----NTYGSAASTAGKEGSARASEQPENAESPDNEDGDCEETTEEAGRE 112
Query: 824 LFLFGEEPS 832
GE P+
Sbjct: 113 PVASGEPPT 121
>gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens]
Length = 562
Score = 33.9 bits (76), Expect = 0.73
Identities = 50/212 (23%), Positives = 73/212 (34%), Gaps = 21/212 (9%)
Query: 664 PTVGAFGHTRCSAFPLEQEADLIEAAEPGGP-HSSRNGLCHPLNHSRTLAGKRPKAPRGE 722
P V F + P EQ+ EP G + +G HP S P AP G
Sbjct: 14 PPVFVFQKDKGQKSPAEQKNLSDSGEEPRGEAEAPHHGTGHP--ESAGEHALEPPAPAGA 71
Query: 723 EAHLPPVSDLTVEFDKLNLQNIGRSVSKTPDESTKTKDQILTSRINAVERD------LLE 776
A PP + + GRS + E + D+ + V+R+
Sbjct: 72 SASTPPPPAPEAQLPPFPRELAGRSAGGSSPEGGEDSDREDGNYCPPVKRERTSSLTQFP 131
Query: 777 PSPADQLGNGHRRTESEMSARIAKMSLSPSSPRHEDQLEVTREPARRLFLFGEEPSKLDQ 836
PS +++ +G R + A + PS E Q V R PA L +P L Q
Sbjct: 132 PSQSEERSSGFRLKPPTLIHGQAPSAGLPSQKPKEQQRSVLR-PA---VLQAPQPKALSQ 187
Query: 837 DVLAA--------LECADVDPHQFPAVHRWKS 860
V ++ +C P P W+S
Sbjct: 188 TVPSSGTNGVSLPADCTGAVPAASPDTAAWRS 219
>gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens]
Length = 567
Score = 33.9 bits (76), Expect = 0.73
Identities = 50/212 (23%), Positives = 73/212 (34%), Gaps = 21/212 (9%)
Query: 664 PTVGAFGHTRCSAFPLEQEADLIEAAEPGGP-HSSRNGLCHPLNHSRTLAGKRPKAPRGE 722
P V F + P EQ+ EP G + +G HP S P AP G
Sbjct: 14 PPVFVFQKDKGQKSPAEQKNLSDSGEEPRGEAEAPHHGTGHP--ESAGEHALEPPAPAGA 71
Query: 723 EAHLPPVSDLTVEFDKLNLQNIGRSVSKTPDESTKTKDQILTSRINAVERD------LLE 776
A PP + + GRS + E + D+ + V+R+
Sbjct: 72 SASTPPPPAPEAQLPPFPRELAGRSAGGSSPEGGEDSDREDGNYCPPVKRERTSSLTQFP 131
Query: 777 PSPADQLGNGHRRTESEMSARIAKMSLSPSSPRHEDQLEVTREPARRLFLFGEEPSKLDQ 836
PS +++ +G R + A + PS E Q V R PA L +P L Q
Sbjct: 132 PSQSEERSSGFRLKPPTLIHGQAPSAGLPSQKPKEQQRSVLR-PA---VLQAPQPKALSQ 187
Query: 837 DVLAA--------LECADVDPHQFPAVHRWKS 860
V ++ +C P P W+S
Sbjct: 188 TVPSSGTNGVSLPADCTGAVPAASPDTAAWRS 219
>gi|24307873 zinc finger protein 651 [Homo sapiens]
Length = 371
Score = 33.9 bits (76), Expect = 0.73
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 33 RRLGPRPGGLGRSG--TPVPPPSAAAAPASGEMTMDALLARLKL 74
RR P P GR G P PPP A+A A G D L A++KL
Sbjct: 11 RRGTPEPEEAGRRGGKRPKPPPGVASASARGPPATDGLGAKVKL 54
>gi|56676324 LEM domain containing 1 [Homo sapiens]
Length = 108
Score = 33.5 bits (75), Expect = 0.95
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 72 LKLLNPDDLREEIVKAGLKCGPITSTTRFIFEKKLAQALL 111
+K L+ L+ ++ K G GPI +TR ++EKKL Q L+
Sbjct: 4 VKCLSDCKLQNQLEKLGFSPGPILPSTRKLYEKKLVQLLV 43
>gi|4506321 protein tyrosine phosphatase, receptor type, N precursor
[Homo sapiens]
Length = 979
Score = 33.5 bits (75), Expect = 0.95
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
Query: 38 RPGGLGRSG----------TPVPPPSAAAAPASGEMTMDALLARLKLLNPDDLREEIVKA 87
RPGGLG SG P +A A G + L + L++ D L +
Sbjct: 6 RPGGLGGSGGLRLLLCLLLLSSRPGGCSAVSAHGCLFDRRLCSHLEVCIQDGLFGQCQVG 65
Query: 88 GLKCGPITSTTRFIFEKKLAQALLEQGGRLSSFYHHEAGVTALSQDPQRI--LKPAEGNP 145
+ P+ T + ++ Q +L Q +H + +SQ+ +RI L+P E P
Sbjct: 66 VGQARPLLQVTSPVLQR--LQGVLRQLMSQGLSWHDDLTQYVISQEMERIPRLRPPEPRP 123
Query: 146 TDQAGFSEDR 155
D++G + R
Sbjct: 124 RDRSGLAPKR 133
>gi|169173314 PREDICTED: hypothetical protein LOC286177 [Homo
sapiens]
Length = 287
Score = 33.1 bits (74), Expect = 1.2
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 16/105 (15%)
Query: 687 EAAEPGGPHSSRNGLCH------------PLNHSRTLAGKRPKAPRGEEAHLPPVSDLTV 734
E PG P+ R CH H++ +A + RG A P++ L +
Sbjct: 91 ECPAPGTPNFGRGCSCHLHAVPTRARLRAVSGHAQFVATRGAITFRGASARWGPMALLRI 150
Query: 735 ----EFDKLNLQNIGRSVSKTPDESTKTKDQILTSRINAVERDLL 775
EF + L+ G S+S+TPDE + + ++R LL
Sbjct: 151 FLLREFGDVPLREAGGSLSETPDEDLEYPQSCVQGNAWKLQRSLL 195
>gi|215598574 ankyrin 1 isoform 9 [Homo sapiens]
Length = 1897
Score = 33.1 bits (74), Expect = 1.2
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 355 MHVAAKENQASICQLTLDVLENPDF--------MRLMYPDDDEAMLQKRIRYVVDLYLNT 406
+H+AA+E A + L L N + + L+ + + I++ V + T
Sbjct: 672 LHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT 731
Query: 407 PDKMGYDTPLHFACKFGNADVVNVLSSHHLIVKNSRNKYDKTP 449
+MGY TPLH A +GN +V L H V N++ K +P
Sbjct: 732 --RMGY-TPLHVASHYGNIKLVKFLLQHQADV-NAKTKLGYSP 770
Score = 30.8 bits (68), Expect = 6.2
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 352 YNVMHVAAKENQASICQLTLDVLENPDFMRLMYPDDDEAMLQKRIRYVVDLYL------N 405
Y +H+AAK+NQ + + L + + + Q+ +V L L N
Sbjct: 636 YTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN 695
Query: 406 TPDKMGYDTPLHFACKFGNADVVNVLSSHHLIV 438
+K G TPLH + G+ V +VL H ++V
Sbjct: 696 LGNKSGL-TPLHLVAQEGHVPVADVLIKHGVMV 727
>gi|70780359 ankyrin 1 isoform 1 [Homo sapiens]
Length = 1881
Score = 33.1 bits (74), Expect = 1.2
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 355 MHVAAKENQASICQLTLDVLENPDF--------MRLMYPDDDEAMLQKRIRYVVDLYLNT 406
+H+AA+E A + L L N + + L+ + + I++ V + T
Sbjct: 639 LHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT 698
Query: 407 PDKMGYDTPLHFACKFGNADVVNVLSSHHLIVKNSRNKYDKTP 449
+MGY TPLH A +GN +V L H V N++ K +P
Sbjct: 699 --RMGY-TPLHVASHYGNIKLVKFLLQHQADV-NAKTKLGYSP 737
Score = 30.8 bits (68), Expect = 6.2
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 352 YNVMHVAAKENQASICQLTLDVLENPDFMRLMYPDDDEAMLQKRIRYVVDLYL------N 405
Y +H+AAK+NQ + + L + + + Q+ +V L L N
Sbjct: 603 YTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN 662
Query: 406 TPDKMGYDTPLHFACKFGNADVVNVLSSHHLIV 438
+K G TPLH + G+ V +VL H ++V
Sbjct: 663 LGNKSGL-TPLHLVAQEGHVPVADVLIKHGVMV 694
>gi|70780357 ankyrin 1 isoform 3 [Homo sapiens]
Length = 1880
Score = 33.1 bits (74), Expect = 1.2
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 355 MHVAAKENQASICQLTLDVLENPDF--------MRLMYPDDDEAMLQKRIRYVVDLYLNT 406
+H+AA+E A + L L N + + L+ + + I++ V + T
Sbjct: 639 LHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT 698
Query: 407 PDKMGYDTPLHFACKFGNADVVNVLSSHHLIVKNSRNKYDKTP 449
+MGY TPLH A +GN +V L H V N++ K +P
Sbjct: 699 --RMGY-TPLHVASHYGNIKLVKFLLQHQADV-NAKTKLGYSP 737
Score = 30.8 bits (68), Expect = 6.2
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 352 YNVMHVAAKENQASICQLTLDVLENPDFMRLMYPDDDEAMLQKRIRYVVDLYL------N 405
Y +H+AAK+NQ + + L + + + Q+ +V L L N
Sbjct: 603 YTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN 662
Query: 406 TPDKMGYDTPLHFACKFGNADVVNVLSSHHLIV 438
+K G TPLH + G+ V +VL H ++V
Sbjct: 663 LGNKSGL-TPLHLVAQEGHVPVADVLIKHGVMV 694
>gi|70780355 ankyrin 1 isoform 2 [Homo sapiens]
Length = 1719
Score = 33.1 bits (74), Expect = 1.2
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 355 MHVAAKENQASICQLTLDVLENPDF--------MRLMYPDDDEAMLQKRIRYVVDLYLNT 406
+H+AA+E A + L L N + + L+ + + I++ V + T
Sbjct: 639 LHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT 698
Query: 407 PDKMGYDTPLHFACKFGNADVVNVLSSHHLIVKNSRNKYDKTP 449
+MGY TPLH A +GN +V L H V N++ K +P
Sbjct: 699 --RMGY-TPLHVASHYGNIKLVKFLLQHQADV-NAKTKLGYSP 737
Score = 30.8 bits (68), Expect = 6.2
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 352 YNVMHVAAKENQASICQLTLDVLENPDFMRLMYPDDDEAMLQKRIRYVVDLYL------N 405
Y +H+AAK+NQ + + L + + + Q+ +V L L N
Sbjct: 603 YTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN 662
Query: 406 TPDKMGYDTPLHFACKFGNADVVNVLSSHHLIV 438
+K G TPLH + G+ V +VL H ++V
Sbjct: 663 LGNKSGL-TPLHLVAQEGHVPVADVLIKHGVMV 694
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,087,253
Number of Sequences: 37866
Number of extensions: 2145469
Number of successful extensions: 6782
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 6594
Number of HSP's gapped (non-prelim): 264
length of query: 938
length of database: 18,247,518
effective HSP length: 112
effective length of query: 826
effective length of database: 14,006,526
effective search space: 11569390476
effective search space used: 11569390476
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.