Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KRIT1 Sequence: fasta or formatted (688aa) NCBI GI: 61742817
Description:

krev interaction trapped 1 isoform 2

Referenced in:

Ankyrin Family
Cardiovascular System

Other entries for this name:
alt prot [736aa] krev interaction trapped 1 isoform 1
alt prot [736aa] krev interaction trapped 1 isoform 1
alt prot [736aa] krev interaction trapped 1 isoform 1
alt prot [736aa] krev interaction trapped 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         36           2
 C cysteine            1.5         10           1
 D aspartate           3.3         23           1
 E glutamate           7.4         51           2
 F phenylalanine       3.1         21           2
 G glycine             5.2         36           3
 H histidine           3.1         21           2
 I isoleucine          6.5         45           1
 K lysine              8.3         57           3
 L leucine            11.2         77           3
 M methionine          2.8         19           1
 N asparagine          5.7         39           2
 P proline             5.2         36           1
 Q glutamine           5.1         35           2
 R arginine            4.4         30           2
 S serine              6.1         42           2
 T threonine           5.7         39           2
 V valine              5.2         36           2
 W tryptophan          1.2          8           1
 Y tyrosine            3.9         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   krev interaction trapped 1 isoform 2 
KRIT1                 0.983   krev interaction trapped 1 isoform 1 
KRIT1                 0.983   krev interaction trapped 1 isoform 1 
KRIT1                 0.983   krev interaction trapped 1 isoform 1 
KRIT1                 0.983   krev interaction trapped 1 isoform 1 
FRMD8                 0.055   FERM domain containing 8 
NF2                   0.021   neurofibromin 2 isoform 5 
NF2                   0.021   neurofibromin 2 isoform 2 
NF2                   0.021   neurofibromin 2 isoform 2 
NF2                   0.021   neurofibromin 2 isoform 2 
NF2                   0.021   neurofibromin 2 isoform 1 
RDX                   0.020   radixin 
TLN2                  0.020   talin 2 
MSN                   0.020   moesin 
TLN1                  0.020   talin 1 
NF2                   0.020   neurofibromin 2 isoform 7 
NF2                   0.020   neurofibromin 2 isoform 7 
NF2                   0.018   neurofibromin 2 isoform 6 
EZR                   0.017   ezrin 
EZR                   0.017   ezrin 
ANKFY1                0.016   ankyrin repeat and FYVE domain containing 1 isoform...
TRPA1                 0.016   ankyrin-like protein 1 
ANKRD44               0.015   ankyrin repeat domain 44 
INVS                  0.015   inversin isoform a 
INVS                  0.015   inversin isoform b 
TNKS                  0.014   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS2                 0.014   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKDD1A               0.012   ankyrin repeat and death domain containing 1A 
KANK1                 0.012   KN motif and ankyrin repeat domains 1 isoform b [Hom...
KANK1                 0.012   KN motif and ankyrin repeat domains 1 isoform a [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press