Guide to the Human Genome
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Name: PTPRN Sequence: fasta or formatted (979aa) NCBI GI: 4506321
Description:

protein tyrosine phosphatase, receptor type, N precursor

Referenced in:

Protein Tyrosine Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         91           3
 C cysteine            1.7         17           1
 D aspartate           4.0         39           2
 E glutamate           6.1         60           2
 F phenylalanine       2.1         21           1
 G glycine             8.1         79           2
 H histidine           3.0         29           1
 I isoleucine          3.1         30           2
 K lysine              3.1         30           2
 L leucine            11.7        115           4
 M methionine          1.7         17           1
 N asparagine          1.7         17           1
 P proline             9.3         91           2
 Q glutamine           6.2         61           2
 R arginine            6.5         64           2
 S serine              8.6         84           3
 T threonine           4.4         43           2
 V valine              6.3         62           2
 W tryptophan          0.8          8           1
 Y tyrosine            2.1         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, receptor type, N precur... 
PTPRN2                0.353   protein tyrosine phosphatase, receptor type, N poly...
PTPRN2                0.342   protein tyrosine phosphatase, receptor type, N poly...
PTPRN2                0.338   protein tyrosine phosphatase, receptor type, N poly...
PTPRT                 0.080   protein tyrosine phosphatase, receptor type, T isof...
PTPRS                 0.080   protein tyrosine phosphatase, receptor type, sigma ...
PTPRD                 0.079   protein tyrosine phosphatase, receptor type, D isof...
PTPRD                 0.079   protein tyrosine phosphatase, receptor type, D isofor...
PTPRD                 0.079   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.079   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.079   protein tyrosine phosphatase, receptor type, D isofo...
PTPRT                 0.079   protein tyrosine phosphatase, receptor type, T isof...
PTPRA                 0.078   protein tyrosine phosphatase, receptor type, A isofo...
PTPRA                 0.078   protein tyrosine phosphatase, receptor type, A isofor...
PTPRA                 0.078   protein tyrosine phosphatase, receptor type, A isofo...
PTPRS                 0.078   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.078   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.078   protein tyrosine phosphatase, receptor type, sigma ...
PTPRJ                 0.077   protein tyrosine phosphatase, receptor type, J isof...
PTPRZ1                0.077   protein tyrosine phosphatase, receptor-type, zeta1 p...
PTPRG                 0.077   protein tyrosine phosphatase, receptor type, G prec...
PTPRF                 0.076   protein tyrosine phosphatase, receptor type, F isof...
PTPRF                 0.076   protein tyrosine phosphatase, receptor type, F isof...
PTPN12                0.076   protein tyrosine phosphatase, non-receptor type 12 ...
PTPRM                 0.075   protein tyrosine phosphatase, receptor type, M isof...
PTPRM                 0.075   protein tyrosine phosphatase, receptor type, M isof...
PTPRK                 0.075   protein tyrosine phosphatase, receptor type, K isofo...
PTPRK                 0.073   protein tyrosine phosphatase, receptor type, K isof...
PTPN22                0.072   protein tyrosine phosphatase, non-receptor type 22 ...
PTPN22                0.072   protein tyrosine phosphatase, non-receptor type 22 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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