Guide to the Human Genome
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Name: KRIT1 Sequence: fasta or formatted (736aa) NCBI GI: 31581522
Description:

krev interaction trapped 1 isoform 1

Referenced in:

Ankyrin Family
Cardiovascular System

Other entries for this name:
alt mRNA [736aa] krev interaction trapped 1 isoform 1
alt mRNA [736aa] krev interaction trapped 1 isoform 1
alt mRNA [736aa] krev interaction trapped 1 isoform 1
alt prot [688aa] krev interaction trapped 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         39           2
 C cysteine            1.6         12           1
 D aspartate           3.8         28           2
 E glutamate           7.5         55           2
 F phenylalanine       3.1         23           2
 G glycine             5.0         37           3
 H histidine           3.3         24           2
 I isoleucine          6.2         46           1
 K lysine              7.7         57           3
 L leucine            11.3         83           3
 M methionine          2.6         19           1
 N asparagine          5.4         40           2
 P proline             5.2         38           1
 Q glutamine           5.0         37           2
 R arginine            4.6         34           2
 S serine              6.5         48           2
 T threonine           5.3         39           2
 V valine              5.2         38           2
 W tryptophan          1.5         11           1
 Y tyrosine            3.8         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   krev interaction trapped 1 isoform 1 
KRIT1                 1.000   krev interaction trapped 1 isoform 1 
KRIT1                 1.000   krev interaction trapped 1 isoform 1 
KRIT1                 1.000   krev interaction trapped 1 isoform 1 
KRIT1                 0.913   krev interaction trapped 1 isoform 2 
FRMD8                 0.051   FERM domain containing 8 
CASKIN1               0.031   CASK interacting protein 1 
RIPK4                 0.030   ankyrin repeat domain 3 
CASKIN2               0.030   cask-interacting protein 2 isoform a 
ANKRD12               0.029   ankyrin repeat domain 12 isoform 1 
ANKRD12               0.029   ankyrin repeat domain 12 isoform 2 
TRPA1                 0.027   ankyrin-like protein 1 
ANKS1B                0.026   cajalin 2 isoform a 
ANKRD11               0.024   ankyrin repeat domain 11 
PSMD10                0.024   proteasome 26S non-ATPase subunit 10 isoform 1 
ANK1                  0.023   ankyrin 1 isoform 9 
ANK1                  0.023   ankyrin 1 isoform 1 
ANK1                  0.023   ankyrin 1 isoform 3 
ANK1                  0.023   ankyrin 1 isoform 2 
ANK1                  0.023   ankyrin 1 isoform 4 
ANKRD50               0.023   ankyrin repeat domain 50 
ANKRD52               0.023   ankyrin repeat domain 52 
ANKS1A                0.022   ankyrin repeat and sterile alpha motif domain conta...
ANK3                  0.022   ankyrin 3 isoform 1 
NFKBIL2               0.022   NF-kappa-B inhibitor-like protein 2 
ANKRD44               0.021   ankyrin repeat domain 44 
ANKDD1A               0.021   ankyrin repeat and death domain containing 1A 
ASB5                  0.021   ankyrin repeat and SOCS box-containing protein 5 [Ho...
ANKRD55               0.021   ankyrin repeat domain 55 isoform 1 
ANKK1                 0.021   ankyrin repeat and kinase domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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