Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 148596953
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148596953 ankyrin repeat and IBR domain containing 1 [Homo
sapiens]
(1089 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148596953 ankyrin repeat and IBR domain containing 1 [Homo sa... 2247 0.0
gi|5453557 ariadne homolog 2 [Homo sapiens] 210 5e-54
gi|187761373 ariadne ubiquitin-conjugating enzyme E2 binding pro... 196 1e-49
gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo... 136 1e-31
gi|35493801 ring finger protein 19 [Homo sapiens] 95 3e-19
gi|35493782 ring finger protein 19 [Homo sapiens] 95 3e-19
gi|34577102 ring finger protein 14 isoform 1 [Homo sapiens] 94 9e-19
gi|34577100 ring finger protein 14 isoform 1 [Homo sapiens] 94 9e-19
gi|34577098 ring finger protein 14 isoform 1 [Homo sapiens] 94 9e-19
gi|34577096 ring finger protein 14 isoform 2 [Homo sapiens] 94 9e-19
gi|4757762 ring finger protein 14 isoform 1 [Homo sapiens] 94 9e-19
gi|188219579 ring finger protein 19B isoform b [Homo sapiens] 93 1e-18
gi|188219577 ring finger protein 19B isoform a [Homo sapiens] 92 2e-18
gi|38045938 ring finger protein 144 [Homo sapiens] 80 8e-15
gi|50284696 IBR domain containing 2 [Homo sapiens] 79 2e-14
gi|22749145 ring finger protein 217 [Homo sapiens] 65 3e-10
gi|169790973 parkin isoform 3 [Homo sapiens] 64 6e-10
gi|169790971 parkin isoform 2 [Homo sapiens] 64 6e-10
gi|169790969 parkin isoform 1 [Homo sapiens] 64 6e-10
gi|116063534 ankyrin repeat domain 27 (VPS9 domain) [Homo sapiens] 63 1e-09
gi|5454168 RanBP-type and C3HC4-type zinc finger containing 1 is... 54 6e-07
gi|144953898 RanBP-type and C3HC4-type zinc finger containing 1 ... 54 6e-07
gi|24586688 ankyrin repeat and SOCS box-containing protein 16 [H... 53 2e-06
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 52 2e-06
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 52 2e-06
gi|4506217 proteasome 26S non-ATPase subunit 10 isoform 1 [Homo ... 52 4e-06
gi|215598574 ankyrin 1 isoform 9 [Homo sapiens] 51 5e-06
gi|70780359 ankyrin 1 isoform 1 [Homo sapiens] 51 5e-06
gi|70780357 ankyrin 1 isoform 3 [Homo sapiens] 51 5e-06
gi|70780355 ankyrin 1 isoform 2 [Homo sapiens] 51 5e-06
>gi|148596953 ankyrin repeat and IBR domain containing 1 [Homo
sapiens]
Length = 1089
Score = 2247 bits (5822), Expect = 0.0
Identities = 1089/1089 (100%), Positives = 1089/1089 (100%)
Query: 1 MGNTTTKFRKALINGDENLACQIYENNPQLKESLDPNTSYGEPYQHNTPLHYAARHGMNK 60
MGNTTTKFRKALINGDENLACQIYENNPQLKESLDPNTSYGEPYQHNTPLHYAARHGMNK
Sbjct: 1 MGNTTTKFRKALINGDENLACQIYENNPQLKESLDPNTSYGEPYQHNTPLHYAARHGMNK 60
Query: 61 ILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHPRLARPTEDDFRRADCLQMI 120
ILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHPRLARPTEDDFRRADCLQMI
Sbjct: 61 ILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHPRLARPTEDDFRRADCLQMI 120
Query: 121 LKWKGAKLDQGEYERAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDT 180
LKWKGAKLDQGEYERAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDT
Sbjct: 121 LKWKGAKLDQGEYERAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDT 180
Query: 181 PCDCAEKQHHKDLALNLESQMVFSRDPEAEEIEAEYAALDKREPYEGLRPQDLRRLKDML 240
PCDCAEKQHHKDLALNLESQMVFSRDPEAEEIEAEYAALDKREPYEGLRPQDLRRLKDML
Sbjct: 181 PCDCAEKQHHKDLALNLESQMVFSRDPEAEEIEAEYAALDKREPYEGLRPQDLRRLKDML 240
Query: 241 IVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSNPENCCQRSGVQMPTPPPSGYNAWD 300
IVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSNPENCCQRSGVQMPTPPPSGYNAWD
Sbjct: 241 IVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSNPENCCQRSGVQMPTPPPSGYNAWD 300
Query: 301 TLPSPRTPRTTRSSVTSPDEISLSPGDLDTSLCDICMCSISVFEDPVDMPCGHDFCRGCW 360
TLPSPRTPRTTRSSVTSPDEISLSPGDLDTSLCDICMCSISVFEDPVDMPCGHDFCRGCW
Sbjct: 301 TLPSPRTPRTTRSSVTSPDEISLSPGDLDTSLCDICMCSISVFEDPVDMPCGHDFCRGCW 360
Query: 361 ESFLNLKIQEGEAHNIFCPAYDCFQLVPVDIIESVVSKEMDKRYLQFDIKAFVENNPAIK 420
ESFLNLKIQEGEAHNIFCPAYDCFQLVPVDIIESVVSKEMDKRYLQFDIKAFVENNPAIK
Sbjct: 361 ESFLNLKIQEGEAHNIFCPAYDCFQLVPVDIIESVVSKEMDKRYLQFDIKAFVENNPAIK 420
Query: 421 WCPTPGCDRAVRLTKQGSNTSGSDTLSFPLLRAPAVDCGKGHLFCWECLGEAHEPCDCQT 480
WCPTPGCDRAVRLTKQGSNTSGSDTLSFPLLRAPAVDCGKGHLFCWECLGEAHEPCDCQT
Sbjct: 421 WCPTPGCDRAVRLTKQGSNTSGSDTLSFPLLRAPAVDCGKGHLFCWECLGEAHEPCDCQT 480
Query: 481 WKNWLQKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKC 540
WKNWLQKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKC
Sbjct: 481 WKNWLQKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKC 540
Query: 541 KYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQHVEEQSKEMTVEAEKKHKRFQELDRFMH 600
KYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQHVEEQSKEMTVEAEKKHKRFQELDRFMH
Sbjct: 541 KYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQHVEEQSKEMTVEAEKKHKRFQELDRFMH 600
Query: 601 YYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALKETEGGCPDTTFIEDAVHVLLKTRRIL 660
YYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALKETEGGCPDTTFIEDAVHVLLKTRRIL
Sbjct: 601 YYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALKETEGGCPDTTFIEDAVHVLLKTRRIL 660
Query: 661 KCSYPYGFFLEPKSTKKEIFELMQTDLEMVTEDLAQKVNRPYLRTPRHKIIKAACLVQQK 720
KCSYPYGFFLEPKSTKKEIFELMQTDLEMVTEDLAQKVNRPYLRTPRHKIIKAACLVQQK
Sbjct: 661 KCSYPYGFFLEPKSTKKEIFELMQTDLEMVTEDLAQKVNRPYLRTPRHKIIKAACLVQQK 720
Query: 721 RQEFLASVARGVAPADSPEAPRRSFAGGTWDWEYLGFASPEEYAEFQYRRRHRQRRRGDV 780
RQEFLASVARGVAPADSPEAPRRSFAGGTWDWEYLGFASPEEYAEFQYRRRHRQRRRGDV
Sbjct: 721 RQEFLASVARGVAPADSPEAPRRSFAGGTWDWEYLGFASPEEYAEFQYRRRHRQRRRGDV 780
Query: 781 HSLLSNPPDPDEPSESTLDIPEGGSSSRRPGTSVVSSASMSVLHSSSLRDYTPASRSENQ 840
HSLLSNPPDPDEPSESTLDIPEGGSSSRRPGTSVVSSASMSVLHSSSLRDYTPASRSENQ
Sbjct: 781 HSLLSNPPDPDEPSESTLDIPEGGSSSRRPGTSVVSSASMSVLHSSSLRDYTPASRSENQ 840
Query: 841 DSLQALSSLDEDDPNILLAIQLSLQESGLALDEETRDFLSNEASLGAIGTSLPSRLDSVP 900
DSLQALSSLDEDDPNILLAIQLSLQESGLALDEETRDFLSNEASLGAIGTSLPSRLDSVP
Sbjct: 841 DSLQALSSLDEDDPNILLAIQLSLQESGLALDEETRDFLSNEASLGAIGTSLPSRLDSVP 900
Query: 901 RNTDSPRAALSSSELLELGDSLMRLGAENDPFSTDTLSSHPLSEARSDFCPSSSDPDSAG 960
RNTDSPRAALSSSELLELGDSLMRLGAENDPFSTDTLSSHPLSEARSDFCPSSSDPDSAG
Sbjct: 901 RNTDSPRAALSSSELLELGDSLMRLGAENDPFSTDTLSSHPLSEARSDFCPSSSDPDSAG 960
Query: 961 QDPNINDNLLGNIMAWFHDMNPQSIALIPPATTEISADSQLPCIKDGSEGVKDVELVLPE 1020
QDPNINDNLLGNIMAWFHDMNPQSIALIPPATTEISADSQLPCIKDGSEGVKDVELVLPE
Sbjct: 961 QDPNINDNLLGNIMAWFHDMNPQSIALIPPATTEISADSQLPCIKDGSEGVKDVELVLPE 1020
Query: 1021 DSMFEDASVSEGRGTQIEENPLEENILAGEAASQAGDSGNEAANRGDGSDVSSQTPQTSS 1080
DSMFEDASVSEGRGTQIEENPLEENILAGEAASQAGDSGNEAANRGDGSDVSSQTPQTSS
Sbjct: 1021 DSMFEDASVSEGRGTQIEENPLEENILAGEAASQAGDSGNEAANRGDGSDVSSQTPQTSS 1080
Query: 1081 DWLEQVHLV 1089
DWLEQVHLV
Sbjct: 1081 DWLEQVHLV 1089
>gi|5453557 ariadne homolog 2 [Homo sapiens]
Length = 493
Score = 210 bits (535), Expect = 5e-54
Identities = 141/529 (26%), Positives = 245/529 (46%), Gaps = 92/529 (17%)
Query: 174 ENENKDTPCDCAEKQHHKDLALNLESQMVFSRDPEAEEIEAEYAALDKREPYEGLRPQDL 233
E E +D P D + ++ +A ++E Q + DPE E ++ L +E EG + +
Sbjct: 25 EEEEEDDPGDIED--YYVGVASDVEQQGADAFDPE----EYQFTCLTYKES-EGALNEHM 77
Query: 234 RRLKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSNPENCCQRSGVQMPTPPP 293
L +L V + A+ +L W ++L+ + SN + VQ P P
Sbjct: 78 TSLASVLKVSHS--------VAKLILVNFHWQVSEILDRYKSNSAQLLVEARVQ---PNP 126
Query: 294 SGYNAWDTLPSPRTPRTTRSSVTSPDEISLSPGDLDTSLCDICMCSISVFEDPVDMPCGH 353
S + +P+ P C +CM + E+ + + C H
Sbjct: 127 SKH-----VPTSHPPHH----------------------CAVCMQFVRK-ENLLSLACQH 158
Query: 354 DFCRGCWESFLNLKIQEGEAHNIFCPAYDCFQLVPVDIIESVV-SKEMDKRYLQFDIKAF 412
FCR CWE ++ +++G + C A DC P D + ++ ++E+ ++Y ++ + +
Sbjct: 159 QFCRSCWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDY 218
Query: 413 VENNPAIKWCPTPGCDRAVRLTKQGSNTSGSDTLSFPLLRAPAVDCGK-GHLFCWECLGE 471
VE++ ++ CP C +R+ + RA V C + +FC++C
Sbjct: 219 VESHYQLQLCPGADCPMVIRVQEP---------------RARRVQCNRCNEVFCFKCRQM 263
Query: 472 AHEPCDCQTWKNWLQKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEG 531
H P DC T + WL K + D+ ++ ++K C C I+KN G
Sbjct: 264 YHAPTDCATIRKWLTKCAD--------------DSETANYISAHTKDCPKCNICIEKNGG 309
Query: 532 CNHMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQHVEEQSKEMTVEAEKKHKR 591
CNHMQC+KCK+DFCW+CL +WK H S YY C+RY+ + QS++
Sbjct: 310 CNHMQCSKCKHDFCWMCLGDWKTHGSE---YYECSRYKENPDIVNQSQQAQAR------- 359
Query: 592 FQELDRFMHYYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALKETEGGCPDTTFIEDAVH 651
+ L +++ Y+ R++NH S QLE + + EK+++ + G D ++++A
Sbjct: 360 -EALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQE---RVMNNLGTWIDWQYLQNAAK 415
Query: 652 VLLKTRRILKCSYPYGFFLEPKSTKKEIFELMQTDLEMVTEDLAQKVNR 700
+L K R L+ +YPY +++E +K++FE Q LE E+L+ KV R
Sbjct: 416 LLAKCRYTLQYTYPYAYYME-SGPRKKLFEYQQAQLEAEIENLSWKVER 463
>gi|187761373 ariadne ubiquitin-conjugating enzyme E2 binding
protein homolog 1 [Homo sapiens]
Length = 557
Score = 196 bits (498), Expect = 1e-49
Identities = 145/518 (27%), Positives = 225/518 (43%), Gaps = 83/518 (16%)
Query: 225 YEGLRPQDLRRLKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMS-NPENCCQR 283
YE L + + + I E +++Q P LL +WD+EKL+E + N E
Sbjct: 101 YEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYFDGNLEKLFAE 160
Query: 284 SGVQMPTPPPSGYNAWDTLPSPRTPRTTRSSVTSPDEISLSPGDLDTSLCDICMCSI--S 341
V P+ S TRSS C IC + S
Sbjct: 161 CHVINPSKK-----------SRTRQMNTRSSAQDMP-------------CQICYLNYPNS 196
Query: 342 VFEDPVDMPCGHDFCRGCWESFLNLKI-QEGEAHNIFCPAYDCFQLVPVDIIESVVSKEM 400
F + CGH FC CW +L KI +EG I CPA+ C LV + + +++
Sbjct: 197 YF---TGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSK 253
Query: 401 DK-RYLQFDIKAFVENNPAIKWCPTPGCDRAVRLTKQGSNTSGSDTLSFPLLRAPAVDCG 459
K +Y +FVE N +KWCP P C V++ +P A V C
Sbjct: 254 VKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKV-------------QYP--DAKPVRCK 298
Query: 460 KGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVGVSEAYEDAANCLWLLTNSKPC 519
G FC+ C H+P C+ K W++K + D+ W+ N+K C
Sbjct: 299 CGRQFCFNCGENWHDPVKCKWLKKWIKKCDD--------------DSETSNWIAANTKEC 344
Query: 520 ANCKSPIQKNEGCNHMQC--AKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQHVEEQ 577
C I+K+ GCNHM C CK +FCW+CL W+ H S+ +Y C RY E
Sbjct: 345 PKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSA---WYNCNRY------NED 395
Query: 578 SKEMTVEAEKKHKRFQELDRFMHYYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALKETE 637
+ +A+++ + L R++ Y R+ NH S + E +L K+KME+ +++
Sbjct: 396 DAKAARDAQERSR--AALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEE----MQQHN 449
Query: 638 GGCPDTTFIEDAVHVLLKTRRILKCSYPYGFFLEPKSTKKEIFELMQTDLEMVTEDLA-- 695
+ F++ AV VL + R L +Y + F+L+ K+ + IFE Q DLE TE L+
Sbjct: 450 MSWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLK-KNNQSIIFENNQADLENATEVLSGY 508
Query: 696 --QKVNRPYLRTPRHKIIKAACLVQQKRQEFLASVARG 731
+ +++ L+ + K+ + +R+ L V G
Sbjct: 509 LERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEG 546
>gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo
sapiens]
Length = 2517
Score = 136 bits (342), Expect = 1e-31
Identities = 117/497 (23%), Positives = 200/497 (40%), Gaps = 96/497 (19%)
Query: 228 LRPQDLRRLKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSNPENCCQRSGVQ 287
+ PQ++ L + + + L A+ LL W E+LL+++ +PE +G+
Sbjct: 1997 MSPQEVEGLMKQTVRQVQETLNLEPDVAQHLLAHSHWGAEQLLQSYSEDPEPLLLAAGLC 2056
Query: 288 MPTPPPSGYNAWDTLPSPRTPRTTRSSVTSPDEISLSPGDLDTSLCDICMCSISVFEDPV 347
+ ++ PD C +C+ + +D
Sbjct: 2057 V--------------------HQAQAVPVRPDH------------CPVCVSPLGCDDDLP 2084
Query: 348 DMPCGHDFCRGCWESFLNLKIQEGEAHNIFCPAYDCFQLVPVDIIESVVSK-EMDKRYLQ 406
+ C H C+ CW +L +I++ N CP DC I ++VS E+ +Y +
Sbjct: 2085 SLCCMHYCCKSCWNEYLTTRIEQNLVLNCTCPIADCPAQPTGAFIRAIVSSPEVISKYEK 2144
Query: 407 FDIKAFVENNPAIKWCPTP-GCDRAVRLTKQGSNTSGSDTLSFPLLRAPAVDCGK-GHLF 464
++ +VE+ + WC P GCDR + G T+ C K G
Sbjct: 2145 ALLRGYVESCSNLTWCTNPQGCDRILCRQGLGCGTT----------------CSKCGWAS 2188
Query: 465 CWEC-LGEAHEPCDCQTWKNWLQKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCK 523
C+ C EAH P C W + + + + V + A + SK C +C+
Sbjct: 2189 CFNCSFPEAHYPASCGHMSQW---VDDGGYYDGMSVEAQSKHLAKLI-----SKRCPSCQ 2240
Query: 524 SPIQKNEGCNHMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQHVEEQSKEMTV 583
+PI+KNEGC HM CAKC + FCW CL+ WK + YY C+ M
Sbjct: 2241 APIEKNEGCLHMTCAKCNHGFCWRCLKSWKPNHKD---YYNCS-------------AMVS 2284
Query: 584 EAEKKHKRFQELDRFMHYYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALKETEGGCPDT 643
+A ++ KRFQ+ + ++ + + E + L R+ A+ E
Sbjct: 2285 KAARQEKRFQDYNERCTFHHQAR--EFAVNLRNRV------------SAIHEVPPP-RSF 2329
Query: 644 TFIEDAVHVLLKTRRILKCSYPYGFFLEPKSTKKEIFELMQTDLEMVTEDLAQKVNRPYL 703
TF+ DA L + R++L + Y F+ + + ++ E +LE+ T L + L
Sbjct: 2330 TFLNDACQGLEQARKVLAYACVYSFYSQ-DAEYMDVVEQQTENLELHTNALQILLEETLL 2388
Query: 704 R----TPRHKIIKAACL 716
R ++++A CL
Sbjct: 2389 RCRDLASSLRLLRADCL 2405
>gi|35493801 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 95.1 bits (235), Expect = 3e-19
Identities = 69/248 (27%), Positives = 107/248 (43%), Gaps = 29/248 (11%)
Query: 310 TTRSSVTSPDEISLSPGDLDTSLCDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQ 369
T SS IS GD C +C+ S P M C H C C +L ++I
Sbjct: 111 TNTSSDNGLTSISKQIGDFIE--CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEIS 168
Query: 370 EGEAHNIFCPAYDCFQLVPVDIIESVVSKE-MDKRYLQFDIKAFVENNPAIKWCPTPGCD 428
E NI CP +C + I ++S + + ++Y +F ++ ++ +P +WCP P C
Sbjct: 169 ESRV-NISCP--ECTERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCG 225
Query: 429 RAVRLTKQGSNTSGSDTLSFPLLRAPAVDCGK---GHLFCWECLGEAHEPCDCQTWKNWL 485
AV ++F P + CG+ G FC+ C H C +
Sbjct: 226 YAV--------------IAFGCASCPKLTCGREGCGTEFCYHCKQIWHPNQTCDAARQER 271
Query: 486 QKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQK-NEG-CNHMQCAKCKYD 543
+ ++ +S + E A + KPC C + I K N+G CNHM CA C +
Sbjct: 272 AQSLRLRTIRSSSISYSQESGAAA----DDIKPCPRCAAYIIKMNDGSCNHMTCAVCGCE 327
Query: 544 FCWICLEE 551
FCW+C++E
Sbjct: 328 FCWLCMKE 335
>gi|35493782 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 95.1 bits (235), Expect = 3e-19
Identities = 69/248 (27%), Positives = 107/248 (43%), Gaps = 29/248 (11%)
Query: 310 TTRSSVTSPDEISLSPGDLDTSLCDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQ 369
T SS IS GD C +C+ S P M C H C C +L ++I
Sbjct: 111 TNTSSDNGLTSISKQIGDFIE--CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEIS 168
Query: 370 EGEAHNIFCPAYDCFQLVPVDIIESVVSKE-MDKRYLQFDIKAFVENNPAIKWCPTPGCD 428
E NI CP +C + I ++S + + ++Y +F ++ ++ +P +WCP P C
Sbjct: 169 ESRV-NISCP--ECTERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCG 225
Query: 429 RAVRLTKQGSNTSGSDTLSFPLLRAPAVDCGK---GHLFCWECLGEAHEPCDCQTWKNWL 485
AV ++F P + CG+ G FC+ C H C +
Sbjct: 226 YAV--------------IAFGCASCPKLTCGREGCGTEFCYHCKQIWHPNQTCDAARQER 271
Query: 486 QKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQK-NEG-CNHMQCAKCKYD 543
+ ++ +S + E A + KPC C + I K N+G CNHM CA C +
Sbjct: 272 AQSLRLRTIRSSSISYSQESGAAA----DDIKPCPRCAAYIIKMNDGSCNHMTCAVCGCE 327
Query: 544 FCWICLEE 551
FCW+C++E
Sbjct: 328 FCWLCMKE 335
>gi|34577102 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 93.6 bits (231), Expect = 9e-19
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 34/234 (14%)
Query: 332 LCDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQEGEAHNIFCPAYDCFQLVPVDI 391
LC IC C E + C H +C+ C + + ++I++G+ + CP C +
Sbjct: 219 LCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQ 278
Query: 392 IESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAVRLTKQGSNTSGSDTLSFPLL 451
++ +V E+ RY + +++ ++ + +CP P C V + + G + +F
Sbjct: 279 VKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPV-MQEPGCTMGICSSCNFA-- 335
Query: 452 RAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVG------------- 498
FC C H C K +K+ +++ E L
Sbjct: 336 ------------FCTLCRLTYHGVSPC---KVTAEKLMDLRNEYLQADEANKRLLDQRYG 380
Query: 499 ---VSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWICL 549
+ +A E+ + WL NSK C C +PI+K +GCN M C C FCWIC+
Sbjct: 381 KRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICM 434
>gi|34577100 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 93.6 bits (231), Expect = 9e-19
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 34/234 (14%)
Query: 332 LCDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQEGEAHNIFCPAYDCFQLVPVDI 391
LC IC C E + C H +C+ C + + ++I++G+ + CP C +
Sbjct: 219 LCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQ 278
Query: 392 IESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAVRLTKQGSNTSGSDTLSFPLL 451
++ +V E+ RY + +++ ++ + +CP P C V + + G + +F
Sbjct: 279 VKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPV-MQEPGCTMGICSSCNFA-- 335
Query: 452 RAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVG------------- 498
FC C H C K +K+ +++ E L
Sbjct: 336 ------------FCTLCRLTYHGVSPC---KVTAEKLMDLRNEYLQADEANKRLLDQRYG 380
Query: 499 ---VSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWICL 549
+ +A E+ + WL NSK C C +PI+K +GCN M C C FCWIC+
Sbjct: 381 KRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICM 434
>gi|34577098 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 93.6 bits (231), Expect = 9e-19
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 34/234 (14%)
Query: 332 LCDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQEGEAHNIFCPAYDCFQLVPVDI 391
LC IC C E + C H +C+ C + + ++I++G+ + CP C +
Sbjct: 219 LCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQ 278
Query: 392 IESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAVRLTKQGSNTSGSDTLSFPLL 451
++ +V E+ RY + +++ ++ + +CP P C V + + G + +F
Sbjct: 279 VKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPV-MQEPGCTMGICSSCNFA-- 335
Query: 452 RAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVG------------- 498
FC C H C K +K+ +++ E L
Sbjct: 336 ------------FCTLCRLTYHGVSPC---KVTAEKLMDLRNEYLQADEANKRLLDQRYG 380
Query: 499 ---VSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWICL 549
+ +A E+ + WL NSK C C +PI+K +GCN M C C FCWIC+
Sbjct: 381 KRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICM 434
>gi|34577096 ring finger protein 14 isoform 2 [Homo sapiens]
Length = 348
Score = 93.6 bits (231), Expect = 9e-19
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 34/234 (14%)
Query: 332 LCDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQEGEAHNIFCPAYDCFQLVPVDI 391
LC IC C E + C H +C+ C + + ++I++G+ + CP C +
Sbjct: 93 LCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQ 152
Query: 392 IESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAVRLTKQGSNTSGSDTLSFPLL 451
++ +V E+ RY + +++ ++ + +CP P C V + + G + +F
Sbjct: 153 VKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPV-MQEPGCTMGICSSCNFA-- 209
Query: 452 RAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVG------------- 498
FC C H C K +K+ +++ E L
Sbjct: 210 ------------FCTLCRLTYHGVSPC---KVTAEKLMDLRNEYLQADEANKRLLDQRYG 254
Query: 499 ---VSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWICL 549
+ +A E+ + WL NSK C C +PI+K +GCN M C C FCWIC+
Sbjct: 255 KRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICM 308
>gi|4757762 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 93.6 bits (231), Expect = 9e-19
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 34/234 (14%)
Query: 332 LCDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQEGEAHNIFCPAYDCFQLVPVDI 391
LC IC C E + C H +C+ C + + ++I++G+ + CP C +
Sbjct: 219 LCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQ 278
Query: 392 IESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAVRLTKQGSNTSGSDTLSFPLL 451
++ +V E+ RY + +++ ++ + +CP P C V + + G + +F
Sbjct: 279 VKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPV-MQEPGCTMGICSSCNFA-- 335
Query: 452 RAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVG------------- 498
FC C H C K +K+ +++ E L
Sbjct: 336 ------------FCTLCRLTYHGVSPC---KVTAEKLMDLRNEYLQADEANKRLLDQRYG 380
Query: 499 ---VSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWICL 549
+ +A E+ + WL NSK C C +PI+K +GCN M C C FCWIC+
Sbjct: 381 KRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICM 434
>gi|188219579 ring finger protein 19B isoform b [Homo sapiens]
Length = 587
Score = 93.2 bits (230), Expect = 1e-18
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 333 CDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQEGEAHNIFCPAYDCFQ-LVPVDI 391
C +C+ + P + C H CR C +L L+I E I CP +C + L P DI
Sbjct: 119 CPLCLVRLPPERAPRLLSCPHRSCRDCLRHYLRLEISESRVP-ISCP--ECSERLNPHDI 175
Query: 392 IESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAVRLTKQGSNTSGSDTLSFPLL 451
+ + +Y +F ++ ++ ++P +WCP P C AV +++
Sbjct: 176 RLLLADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAV--------------IAYGCA 221
Query: 452 RAPAVDC---GKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVGVSEAYEDAAN 508
P + C G FC+ C H C + + ++ + G+S E +
Sbjct: 222 SCPKLTCEREGCQTEFCYHCKQIWHPNQTCDMARQQRAQTLRVRTKHTSGLSYGQESGPD 281
Query: 509 CLWLLTNSKPCANCKSPIQK-NEG-CNHMQCAKCKYDFCWICLEE 551
+ KPC C + I K N+G CNHM CA C +FCW+C++E
Sbjct: 282 DI------KPCPRCSAYIIKMNDGSCNHMTCAVCGCEFCWLCMKE 320
>gi|188219577 ring finger protein 19B isoform a [Homo sapiens]
Length = 732
Score = 92.4 bits (228), Expect = 2e-18
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 28/225 (12%)
Query: 333 CDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQEGEAHNIFCPAYDCFQ-LVPVDI 391
C +C+ + P + C H CR C +L L+I E I CP +C + L P DI
Sbjct: 119 CPLCLVRLPPERAPRLLSCPHRSCRDCLRHYLRLEISESRVP-ISCP--ECSERLNPHDI 175
Query: 392 IESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAVRLTKQGSNTSGSDTLSFPLL 451
+ + +Y +F ++ ++ ++P +WCP P C AV +++
Sbjct: 176 RLLLADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAV--------------IAYGCA 221
Query: 452 RAPAVDC---GKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVGVSEAYEDAAN 508
P + C G FC+ C H C + + ++ + G+S E
Sbjct: 222 SCPKLTCEREGCQTEFCYHCKQIWHPNQTCDMARQQRAQTLRVRTKHTSGLSYGQESGP- 280
Query: 509 CLWLLTNSKPCANCKSPIQK-NEG-CNHMQCAKCKYDFCWICLEE 551
+ KPC C + I K N+G CNHM CA C +FCW+C++E
Sbjct: 281 ----ADDIKPCPRCSAYIIKMNDGSCNHMTCAVCGCEFCWLCMKE 321
>gi|38045938 ring finger protein 144 [Homo sapiens]
Length = 292
Score = 80.5 bits (197), Expect = 8e-15
Identities = 63/230 (27%), Positives = 90/230 (39%), Gaps = 32/230 (13%)
Query: 329 DTSLCDICMCSISVFEDPVDM-----PCGHDFCRGCWESFLNLKIQEGEAHNIFCPAYDC 383
D +L + C + + E PV+ C FC C + ++ L I+EG I CP C
Sbjct: 11 DLALDPLVSCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAAC 70
Query: 384 FQL--VPVDIIESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAVRLTKQGSNTS 441
+ + + IE +V+ E+ +RY + + V +P WCP C +L G T
Sbjct: 71 PKQGHLQENEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDVGLQTP 130
Query: 442 GSDTLSFPLLRAPAVDCGKGHL-FCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVGVS 500
V C + FC C H C IT + E
Sbjct: 131 ------------QPVQCKACRMEFCSTCKASWHPGQGCPE----TMPITFLPGETSAAFK 174
Query: 501 EAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWICLE 550
+DA K C CK I+++EGC M C CK+ FCW CLE
Sbjct: 175 MEEDDAP--------IKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLE 216
>gi|50284696 IBR domain containing 2 [Homo sapiens]
Length = 303
Score = 79.0 bits (193), Expect = 2e-14
Identities = 62/233 (26%), Positives = 92/233 (39%), Gaps = 32/233 (13%)
Query: 324 SPGDLDTS---LCDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQEGEAHNIFCPA 380
+PGDL + C +C+C S+ + C FC C + ++ L I+EG I CP
Sbjct: 18 TPGDLAPAPLITCKLCLCEQSLDKMTTLQECQCIFCTACLKQYMQLAIREGCGSPITCPD 77
Query: 381 YDCFQ--LVPVDIIESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAVRLTKQGS 438
C + I +V + + Y + + V +P WCP C + S
Sbjct: 78 MVCLNHGTLQEAEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQTVCPV---AS 134
Query: 439 NTSGSDTLSFPLLRAPAVDCGKGHL-FCWECLGEAHEPCDCQTWKNWLQKITEMKPEELV 497
+ G L V+C HL FC C H C ++ + + L
Sbjct: 135 SDPGQPVL---------VECPSCHLKFCSCCKDAWHAEVSC---RDSQPIVLPTEHRALF 182
Query: 498 GVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWICLE 550
G DA + K C C+ I++NEGC M C CK+ FCW CL+
Sbjct: 183 GT-----DAEAPI------KQCPVCRVYIERNEGCAQMMCKNCKHTFCWYCLQ 224
>gi|22749145 ring finger protein 217 [Homo sapiens]
Length = 275
Score = 65.1 bits (157), Expect = 3e-10
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 366 LKIQEGEAHNIFCPAYDCFQLVPVDIIESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTP 425
+K+Q G+ I CP +CF+ + + ++ E +Y F ++++ P P
Sbjct: 1 MKVQLGQVE-IKCPITECFEFLEETTVVYNLTHEDSIKYKYFLELGRIDSSTK----PCP 55
Query: 426 GCDRAVRLTKQGSNTSGSDTLSFPLLRAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWL 485
C K+G + S + S ++ P ++C++C HE +C+ +K
Sbjct: 56 QCKHFTTFKKKGHIPTPSRSESKYKIQCPTCQ----FVWCFKCHSPWHEGVNCKEYKKGD 111
Query: 486 QKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFC 545
+ + E G N++ C CK IQ+ EGC+HM C++C +FC
Sbjct: 112 KLLRHWASEIEHGQR--------------NAQKCPKCKIHIQRTEGCDHMTCSQCNTNFC 157
Query: 546 WICLEEWKK 554
+ C E +++
Sbjct: 158 YRCGERYRQ 166
>gi|169790973 parkin isoform 3 [Homo sapiens]
Length = 316
Score = 64.3 bits (155), Expect = 6e-10
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 28/169 (16%)
Query: 395 VVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAV-------RLTKQGSNTSGSDTLS 447
++ +E RY Q+ + V + CP PGC + ++T +G N G
Sbjct: 157 ILGEEQYNRYQQYGAEECVLQMGGVL-CPRPGCGAGLLPEPDQRKVTCEGGNGLGC---- 211
Query: 448 FPLLRAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVGVSEAYEDAA 507
G FC EC EA+ +C T+ + +A +AA
Sbjct: 212 -------------GFAFCRECK-EAYHEGECSAVFEASGTTTQAYRVDERAAEQARWEAA 257
Query: 508 NCLWLLTNSKPCANCKSPIQKNEGCNHMQC--AKCKYDFCWICLEEWKK 554
+ + +KPC C P++KN GC HM+C +C+ ++CW C EW +
Sbjct: 258 SKETIKKTTKPCPRCHVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEWNR 306
>gi|169790971 parkin isoform 2 [Homo sapiens]
Length = 437
Score = 64.3 bits (155), Expect = 6e-10
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 28/169 (16%)
Query: 395 VVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAV-------RLTKQGSNTSGSDTLS 447
++ +E RY Q+ + V + CP PGC + ++T +G N G
Sbjct: 278 ILGEEQYNRYQQYGAEECVLQMGGVL-CPRPGCGAGLLPEPDQRKVTCEGGNGLGC---- 332
Query: 448 FPLLRAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVGVSEAYEDAA 507
G FC EC EA+ +C T+ + +A +AA
Sbjct: 333 -------------GFAFCRECK-EAYHEGECSAVFEASGTTTQAYRVDERAAEQARWEAA 378
Query: 508 NCLWLLTNSKPCANCKSPIQKNEGCNHMQC--AKCKYDFCWICLEEWKK 554
+ + +KPC C P++KN GC HM+C +C+ ++CW C EW +
Sbjct: 379 SKETIKKTTKPCPRCHVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEWNR 427
>gi|169790969 parkin isoform 1 [Homo sapiens]
Length = 465
Score = 64.3 bits (155), Expect = 6e-10
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 28/169 (16%)
Query: 395 VVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAV-------RLTKQGSNTSGSDTLS 447
++ +E RY Q+ + V + CP PGC + ++T +G N G
Sbjct: 306 ILGEEQYNRYQQYGAEECVLQMGGVL-CPRPGCGAGLLPEPDQRKVTCEGGNGLGC---- 360
Query: 448 FPLLRAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVGVSEAYEDAA 507
G FC EC EA+ +C T+ + +A +AA
Sbjct: 361 -------------GFAFCRECK-EAYHEGECSAVFEASGTTTQAYRVDERAAEQARWEAA 406
Query: 508 NCLWLLTNSKPCANCKSPIQKNEGCNHMQC--AKCKYDFCWICLEEWKK 554
+ + +KPC C P++KN GC HM+C +C+ ++CW C EW +
Sbjct: 407 SKETIKKTTKPCPRCHVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEWNR 455
>gi|116063534 ankyrin repeat domain 27 (VPS9 domain) [Homo sapiens]
Length = 1050
Score = 63.2 bits (152), Expect = 1e-09
Identities = 53/186 (28%), Positives = 76/186 (40%), Gaps = 14/186 (7%)
Query: 47 NTPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHPRLARP 106
++PLH AA HG ++ L N RN +HL C + + L A+P
Sbjct: 745 SSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSN-AKP 803
Query: 107 TEDDFRRADCLQMILKWKGAK-------LDQGEYERAAIDAVDNKKNTPLHYAAASGMKA 159
+ D + +I G L G A+I+A +NK NT LH A
Sbjct: 804 NKKDL--SGNTPLIYACSGGHHELVALLLQHG----ASINASNNKGNTALHEAVIEKHVF 857
Query: 160 CVELLVKHGGDLFAENENKDTPCDCAEKQHHKDLALNLESQMVFSRDPEAEEIEAEYAAL 219
VELL+ HG + N+ + T DCAE+ L + V S D AE EY +
Sbjct: 858 VVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVASLDDVAETDRKEYVTV 917
Query: 220 DKREPY 225
R+ +
Sbjct: 918 KIRKKW 923
Score = 61.6 bits (148), Expect = 4e-09
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 35 DPN--TSYGEPYQHNTPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQI 92
DP+ T + + +TPLH AA G ++ + + N + H T +HL C
Sbjct: 450 DPSVVTPFSRDDRGHTPLHVAAVCGQASLIDLLVSKGAMVNATDYHGATPLHLACQKGYQ 509
Query: 93 MISEGALHPRLARPTEDD-----------FRRADCLQMILKWKGAKLDQGEYERAAIDAV 141
++ LH + + +D+ + DC++ ++ + + E +D
Sbjct: 510 SVTLLLLHYKASAEVQDNNGNTPLHLACTYGHEDCVKALVYY--------DVESCRLDIG 561
Query: 142 DNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCA 185
+ K +TPLH AA G + +E L+++G +N K+TP CA
Sbjct: 562 NEKGDTPLHIAARWGYQGVIETLLQNGASTEIQNRLKETPLKCA 605
Score = 35.4 bits (80), Expect = 0.30
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 138 IDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHH 190
++ ++PLH AA G + LL+KHG + A N ++ P A +Q H
Sbjct: 737 VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGH 789
Score = 34.3 bits (77), Expect = 0.66
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 142 DNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKDLALNL 197
D++ +TPLH AA G + ++LLV G + A + + TP A ++ ++ + L L
Sbjct: 460 DDRGHTPLHVAAVCGQASLIDLLVSKGAMVNATDYHGATPLHLACQKGYQSVTLLL 515
Score = 32.0 bits (71), Expect = 3.3
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 136 AAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKD 192
A ++A D TPLH A G ++ LL+ + ++ N +TP A H+D
Sbjct: 487 AMVNATDYHGATPLHLACQKGYQSVTLLLLHYKASAEVQDNNGNTPLHLACTYGHED 543
>gi|5454168 RanBP-type and C3HC4-type zinc finger containing 1
isoform 1 [Homo sapiens]
Length = 468
Score = 54.3 bits (129), Expect = 6e-07
Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 31/220 (14%)
Query: 333 CDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQEGEAHNIFCP----AYDCFQLVP 388
C +C ++ E V C H FCR C L I+ + + CP Y C +
Sbjct: 240 CPVCYSVLAPGEAVVLRECLHTFCREC----LQGTIRNSQEAEVSCPFIDNTYSCSGKLL 295
Query: 389 VDIIESVVSKEMDKRYLQFDIKAFVENNPAIKW-CPTPGCDRAVRLTKQGSNTSGSDTLS 447
I+++++ E +R+L I + EN A + C TP C +G D
Sbjct: 296 EREIKALLTPEDYQRFLDLGI-SIAENRSAFSYHCKTPDC--------KGWCFFEDDVNE 346
Query: 448 FPLLRAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVGVSEAYEDAA 507
F V+C L C HE +C+ + Q+ ++ + V + E
Sbjct: 347 FTCPVCFHVNC----LLC----KAIHEQMNCKEY----QEDLALRAQNDVAARQTTE-ML 393
Query: 508 NCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWI 547
+ + C C+ +QK +GC+ ++C C + CW+
Sbjct: 394 KVMLQQGEAMRCPQCQIVVQKKDGCDWIRCTVCHTEICWV 433
>gi|144953898 RanBP-type and C3HC4-type zinc finger containing 1
isoform 2 [Homo sapiens]
Length = 510
Score = 54.3 bits (129), Expect = 6e-07
Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 31/220 (14%)
Query: 333 CDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQEGEAHNIFCP----AYDCFQLVP 388
C +C ++ E V C H FCR C L I+ + + CP Y C +
Sbjct: 282 CPVCYSVLAPGEAVVLRECLHTFCREC----LQGTIRNSQEAEVSCPFIDNTYSCSGKLL 337
Query: 389 VDIIESVVSKEMDKRYLQFDIKAFVENNPAIKW-CPTPGCDRAVRLTKQGSNTSGSDTLS 447
I+++++ E +R+L I + EN A + C TP C +G D
Sbjct: 338 EREIKALLTPEDYQRFLDLGI-SIAENRSAFSYHCKTPDC--------KGWCFFEDDVNE 388
Query: 448 FPLLRAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVGVSEAYEDAA 507
F V+C L C HE +C+ + Q+ ++ + V + E
Sbjct: 389 FTCPVCFHVNC----LLC----KAIHEQMNCKEY----QEDLALRAQNDVAARQTTE-ML 435
Query: 508 NCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWI 547
+ + C C+ +QK +GC+ ++C C + CW+
Sbjct: 436 KVMLQQGEAMRCPQCQIVVQKKDGCDWIRCTVCHTEICWV 475
>gi|24586688 ankyrin repeat and SOCS box-containing protein 16 [Homo
sapiens]
Length = 453
Score = 52.8 bits (125), Expect = 2e-06
Identities = 45/149 (30%), Positives = 64/149 (42%), Gaps = 27/149 (18%)
Query: 37 NTSYGEPYQHNTPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISE 96
N + GE + TPLH AA G+ + + +L + R ET+++ C G +E
Sbjct: 203 NLAAGESQE--TPLHVAAARGLEQHVALYLEHGADVGLRTSQGETALNTACAG-----AE 255
Query: 97 GALHPRLARPTEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDNKKNTPLHYAAASG 156
G P R + RR L+ G RAA K++TPLH A A+G
Sbjct: 256 G---PGSCRRHQAAARRL-------------LEAGADARAA----GRKRHTPLHNACANG 295
Query: 157 MKACVELLVKHGGDLFAENENKDTPCDCA 185
ELL+++G N TP DCA
Sbjct: 296 CGGLAELLLRYGARAEVPNGAGHTPMDCA 324
Score = 31.6 bits (70), Expect = 4.3
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 22/126 (17%)
Query: 78 HNETSMHLLCMGPQIMISEG---ALHPRLARPTEDDFRRADCLQMILKWKGAKLDQGEYE 134
+ + + HL+ G ++ G ALH AR + DC++++L + GAK +
Sbjct: 123 YTDCARHLIRQGAELDARVGGRAALHEACARA------QFDCVRLLLTF-GAKAN----- 170
Query: 135 RAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDL-FAENENKDTPCD-CAEKQHHKD 192
+ + TPLH C +LL++ G + A E+++TP A + +
Sbjct: 171 -----VLTEEGTTPLHLCTIPESLQCAKLLLEAGATVNLAAGESQETPLHVAAARGLEQH 225
Query: 193 LALNLE 198
+AL LE
Sbjct: 226 VALYLE 231
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 52.4 bits (124), Expect = 2e-06
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 146 NTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKDLALNLESQMVFSR 205
+TPLH +A+SG + V+LL++HGG+ F N++ + P D AE + +L L L+ ++ S
Sbjct: 229 DTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDVAETE---ELELLLKREVPLSD 285
Query: 206 DPEAEEIEAEYAALDKREPYEGLRPQDLRRLKDMLIVETADML--QAPLFTAEALLRAHD 263
D E+ E +++ E + D KD LI E+ +L + PL +A D
Sbjct: 286 DDESYTDSEEAQSVNPSSVDENI---DSETEKDSLICESKQILPSKTPLPSALDEYEFKD 342
Query: 264 WDREKL 269
D E++
Sbjct: 343 DDDEEI 348
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 52.4 bits (124), Expect = 2e-06
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 146 NTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKDLALNLESQMVFSR 205
+TPLH +A+SG + V+LL++HGG+ F N++ + P D AE + +L L L+ ++ S
Sbjct: 252 DTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDVAETE---ELELLLKREVPLSD 308
Query: 206 DPEAEEIEAEYAALDKREPYEGLRPQDLRRLKDMLIVETADML--QAPLFTAEALLRAHD 263
D E+ E +++ E + D KD LI E+ +L + PL +A D
Sbjct: 309 DDESYTDSEEAQSVNPSSVDENI---DSETEKDSLICESKQILPSKTPLPSALDEYEFKD 365
Query: 264 WDREKL 269
D E++
Sbjct: 366 DDDEEI 371
>gi|4506217 proteasome 26S non-ATPase subunit 10 isoform 1 [Homo
sapiens]
Length = 226
Score = 51.6 bits (122), Expect = 4e-06
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 8/143 (5%)
Query: 48 TPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQ----IMISEGALHPRL 103
+PLH AA G ++I+ LG+ N N + T +H + +M+ EG +P
Sbjct: 75 SPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-- 132
Query: 104 ARPTEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDNKKNTPLHYAAASGMKACVEL 163
+D + + K + Y +A+ + D + NTPLH A +L
Sbjct: 133 --DAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKL 190
Query: 164 LVKHGGDLFAENENKDTPCDCAE 186
LV G ++ EN+ + TP A+
Sbjct: 191 LVSQGASIYIENKEEKTPLQVAK 213
Score = 33.5 bits (75), Expect = 1.1
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 147 TPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKDLALNL 197
+PLH AA++G V+ L+ G + A N+N TP A ++ ++A+ L
Sbjct: 75 SPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVML 125
>gi|215598574 ankyrin 1 isoform 9 [Homo sapiens]
Length = 1897
Score = 51.2 bits (121), Expect = 5e-06
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 46 HNTPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALH--PRL 103
H TPLH AA G +++ L + PN R ++ T +H+ C + + E L +
Sbjct: 371 HLTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHVRVMELLLKTGASI 430
Query: 104 ARPTEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDN-KKNTPLHYAAASGMKACVE 162
TE L + + + +R A V N K TPLH AA +G +
Sbjct: 431 DAVTESGLTP---LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAK 487
Query: 163 LLVKHGGDLFAENENKDTPCDCAEKQHHKDL 193
L+++ + A+ ++ TP CA + H ++
Sbjct: 488 YLLQNKAKVNAKAKDDQTPLHCAARIGHTNM 518
Score = 43.9 bits (102), Expect = 8e-04
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 24/188 (12%)
Query: 39 SYGEPYQHNTP-LHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGP-----QI 92
+YG + P LH AAR+ + L D NP+ + T +H+ Q+
Sbjct: 198 NYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQL 257
Query: 93 MISEGA---LHPRLA-RPTEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDNKKNTP 148
+++ GA P+ P RR + + + L LD+G A I+ + TP
Sbjct: 258 LLNRGASVNFTPQNGITPLHIASRRGNVIMVRLL-----LDRG----AQIETKTKDELTP 308
Query: 149 LHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKDLALNLESQMVFSRDPE 208
LH AA +G E+L+ HG + A+ +N +P A + H D +++ D E
Sbjct: 309 LHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCV-----RLLLQYDAE 363
Query: 209 AEEIEAEY 216
++I ++
Sbjct: 364 IDDITLDH 371
Score = 43.9 bits (102), Expect = 8e-04
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 48 TPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHPRLARP- 106
TPLH AAR G ++ L + NPN T +H+ + L ++
Sbjct: 505 TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQAC 564
Query: 107 -TEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDNKKN-TPLHYAAASGMKACVELL 164
T+ F L + K+ ++ + ER A K TPLH A V+LL
Sbjct: 565 MTKKGFTP---LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL 621
Query: 165 VKHGGDLFAENENKDTPCDCAEKQHHKDLALNL 197
+ GG + N TP A KQ+ ++A +L
Sbjct: 622 LPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSL 654
Score = 43.1 bits (100), Expect = 0.001
Identities = 41/182 (22%), Positives = 71/182 (39%), Gaps = 35/182 (19%)
Query: 14 NGDENLACQIYENNPQLKESLDP--NTSYGEPYQHNTPLHYAARHGMNKILGTFLGRDGN 71
NG L +N ++ SL ++ E Q TPLH AA+ G +++ L + N
Sbjct: 634 NGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN 693
Query: 72 PNKRNVHNETSMHLLCMGPQIMISEGALHPRLARPTEDDFRRADCLQMILKWKGAKLDQG 131
N N T +HL+ + +++ +++K
Sbjct: 694 GNLGNKSGLTPLHLVAQEGHVPVAD----------------------VLIK--------- 722
Query: 132 EYERAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHK 191
+DA TPLH A+ G V+ L++H D+ A+ + +P A +Q H
Sbjct: 723 --HGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT 780
Query: 192 DL 193
D+
Sbjct: 781 DI 782
Score = 42.4 bits (98), Expect = 0.002
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 48 TPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHPRLARPT 107
TPLH AA++G ++ L RD +PN + T +H+ + I + L PR P
Sbjct: 571 TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVK-LLLPRGGSPH 629
Query: 108 EDDFRRADCLQMILKWKGAKLDQGEYERAAI------DAVDNKKNTPLHYAAASGMKACV 161
+ L + AK +Q E R+ + +A + TPLH AA G V
Sbjct: 630 SPAWNGYTPLHI-----AAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMV 684
Query: 162 ELLVKHGGDLFAENENKDTPCDCAEKQHHKDLA 194
LL+ + N++ TP ++ H +A
Sbjct: 685 ALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVA 717
Score = 36.6 bits (83), Expect = 0.13
Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 22/159 (13%)
Query: 43 PYQHNTPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALH-- 100
P TPLH A+R G ++ L R + T +H + ISE L
Sbjct: 269 PQNGITPLHIASRRGNVIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRISEILLDHG 328
Query: 101 PRLARPTEDDFR---------RADCLQMILKWKGAKLDQGEYERAAIDAVDNKKNTPLHY 151
+ T++ DC++++L++ A ID + TPLH
Sbjct: 329 APIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYD-----------AEIDDITLDHLTPLHV 377
Query: 152 AAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHH 190
AA G ++L+ G + N TP A K++H
Sbjct: 378 AAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNH 416
Score = 36.2 bits (82), Expect = 0.17
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 133 YERAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKD 192
++ ++ K NT LH AA +G V LV +G ++ A+++ TP A +++H +
Sbjct: 99 HKEIILETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLE 158
Query: 193 L 193
+
Sbjct: 159 V 159
Score = 31.2 bits (69), Expect = 5.6
Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 14/154 (9%)
Query: 48 TPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLC-----MGPQIMISEGALHPR 102
TPLH AA + + L R + N + T +H+ + ++++ GA +
Sbjct: 241 TPLHIAAHYENLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGA---Q 297
Query: 103 LARPTEDDFRRADCLQMI--LKWKGAKLDQGEYERAAIDAVDNKKNTPLHYAAASGMKAC 160
+ T+D+ C ++ LD G A I A +P+H AA C
Sbjct: 298 IETKTKDELTPLHCAARNGHVRISEILLDHG----APIQAKTKNGLSPIHMAAQGDHLDC 353
Query: 161 VELLVKHGGDLFAENENKDTPCDCAEKQHHKDLA 194
V LL+++ ++ + TP A H +A
Sbjct: 354 VRLLLQYDAEIDDITLDHLTPLHVAAHCGHHRVA 387
Score = 30.8 bits (68), Expect = 7.3
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 136 AAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKDLAL 195
A ++A K TPL+ AA V+ L+++G + E+ TP A +Q H+++
Sbjct: 135 ANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVA 194
Query: 196 NL 197
+L
Sbjct: 195 HL 196
>gi|70780359 ankyrin 1 isoform 1 [Homo sapiens]
Length = 1881
Score = 51.2 bits (121), Expect = 5e-06
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 46 HNTPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALH--PRL 103
H TPLH AA G +++ L + PN R ++ T +H+ C + + E L +
Sbjct: 338 HLTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHVRVMELLLKTGASI 397
Query: 104 ARPTEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDN-KKNTPLHYAAASGMKACVE 162
TE L + + + +R A V N K TPLH AA +G +
Sbjct: 398 DAVTESGLTP---LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAK 454
Query: 163 LLVKHGGDLFAENENKDTPCDCAEKQHHKDL 193
L+++ + A+ ++ TP CA + H ++
Sbjct: 455 YLLQNKAKVNAKAKDDQTPLHCAARIGHTNM 485
Score = 43.9 bits (102), Expect = 8e-04
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 24/188 (12%)
Query: 39 SYGEPYQHNTP-LHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGP-----QI 92
+YG + P LH AAR+ + L D NP+ + T +H+ Q+
Sbjct: 165 NYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQL 224
Query: 93 MISEGA---LHPRLA-RPTEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDNKKNTP 148
+++ GA P+ P RR + + + L LD+G A I+ + TP
Sbjct: 225 LLNRGASVNFTPQNGITPLHIASRRGNVIMVRLL-----LDRG----AQIETKTKDELTP 275
Query: 149 LHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKDLALNLESQMVFSRDPE 208
LH AA +G E+L+ HG + A+ +N +P A + H D +++ D E
Sbjct: 276 LHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCV-----RLLLQYDAE 330
Query: 209 AEEIEAEY 216
++I ++
Sbjct: 331 IDDITLDH 338
Score = 43.9 bits (102), Expect = 8e-04
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 48 TPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHPRLARP- 106
TPLH AAR G ++ L + NPN T +H+ + L ++
Sbjct: 472 TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQAC 531
Query: 107 -TEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDNKKN-TPLHYAAASGMKACVELL 164
T+ F L + K+ ++ + ER A K TPLH A V+LL
Sbjct: 532 MTKKGFTP---LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL 588
Query: 165 VKHGGDLFAENENKDTPCDCAEKQHHKDLALNL 197
+ GG + N TP A KQ+ ++A +L
Sbjct: 589 LPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSL 621
Score = 43.1 bits (100), Expect = 0.001
Identities = 41/182 (22%), Positives = 71/182 (39%), Gaps = 35/182 (19%)
Query: 14 NGDENLACQIYENNPQLKESLDP--NTSYGEPYQHNTPLHYAARHGMNKILGTFLGRDGN 71
NG L +N ++ SL ++ E Q TPLH AA+ G +++ L + N
Sbjct: 601 NGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN 660
Query: 72 PNKRNVHNETSMHLLCMGPQIMISEGALHPRLARPTEDDFRRADCLQMILKWKGAKLDQG 131
N N T +HL+ + +++ +++K
Sbjct: 661 GNLGNKSGLTPLHLVAQEGHVPVAD----------------------VLIK--------- 689
Query: 132 EYERAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHK 191
+DA TPLH A+ G V+ L++H D+ A+ + +P A +Q H
Sbjct: 690 --HGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT 747
Query: 192 DL 193
D+
Sbjct: 748 DI 749
Score = 42.4 bits (98), Expect = 0.002
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 48 TPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHPRLARPT 107
TPLH AA++G ++ L RD +PN + T +H+ + I + L PR P
Sbjct: 538 TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVK-LLLPRGGSPH 596
Query: 108 EDDFRRADCLQMILKWKGAKLDQGEYERAAI------DAVDNKKNTPLHYAAASGMKACV 161
+ L + AK +Q E R+ + +A + TPLH AA G V
Sbjct: 597 SPAWNGYTPLHI-----AAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMV 651
Query: 162 ELLVKHGGDLFAENENKDTPCDCAEKQHHKDLA 194
LL+ + N++ TP ++ H +A
Sbjct: 652 ALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVA 684
Score = 36.6 bits (83), Expect = 0.13
Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 22/159 (13%)
Query: 43 PYQHNTPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALH-- 100
P TPLH A+R G ++ L R + T +H + ISE L
Sbjct: 236 PQNGITPLHIASRRGNVIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRISEILLDHG 295
Query: 101 PRLARPTEDDFR---------RADCLQMILKWKGAKLDQGEYERAAIDAVDNKKNTPLHY 151
+ T++ DC++++L++ A ID + TPLH
Sbjct: 296 APIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYD-----------AEIDDITLDHLTPLHV 344
Query: 152 AAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHH 190
AA G ++L+ G + N TP A K++H
Sbjct: 345 AAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNH 383
Score = 36.2 bits (82), Expect = 0.17
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 133 YERAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKD 192
++ ++ K NT LH AA +G V LV +G ++ A+++ TP A +++H +
Sbjct: 66 HKEIILETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLE 125
Query: 193 L 193
+
Sbjct: 126 V 126
Score = 31.2 bits (69), Expect = 5.6
Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 14/154 (9%)
Query: 48 TPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLC-----MGPQIMISEGALHPR 102
TPLH AA + + L R + N + T +H+ + ++++ GA +
Sbjct: 208 TPLHIAAHYENLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGA---Q 264
Query: 103 LARPTEDDFRRADCLQMI--LKWKGAKLDQGEYERAAIDAVDNKKNTPLHYAAASGMKAC 160
+ T+D+ C ++ LD G A I A +P+H AA C
Sbjct: 265 IETKTKDELTPLHCAARNGHVRISEILLDHG----APIQAKTKNGLSPIHMAAQGDHLDC 320
Query: 161 VELLVKHGGDLFAENENKDTPCDCAEKQHHKDLA 194
V LL+++ ++ + TP A H +A
Sbjct: 321 VRLLLQYDAEIDDITLDHLTPLHVAAHCGHHRVA 354
Score = 30.8 bits (68), Expect = 7.3
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 136 AAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKDLAL 195
A ++A K TPL+ AA V+ L+++G + E+ TP A +Q H+++
Sbjct: 102 ANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVA 161
Query: 196 NL 197
+L
Sbjct: 162 HL 163
>gi|70780357 ankyrin 1 isoform 3 [Homo sapiens]
Length = 1880
Score = 51.2 bits (121), Expect = 5e-06
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 46 HNTPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALH--PRL 103
H TPLH AA G +++ L + PN R ++ T +H+ C + + E L +
Sbjct: 338 HLTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHVRVMELLLKTGASI 397
Query: 104 ARPTEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDN-KKNTPLHYAAASGMKACVE 162
TE L + + + +R A V N K TPLH AA +G +
Sbjct: 398 DAVTESGLTP---LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAK 454
Query: 163 LLVKHGGDLFAENENKDTPCDCAEKQHHKDL 193
L+++ + A+ ++ TP CA + H ++
Sbjct: 455 YLLQNKAKVNAKAKDDQTPLHCAARIGHTNM 485
Score = 43.9 bits (102), Expect = 8e-04
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 24/188 (12%)
Query: 39 SYGEPYQHNTP-LHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGP-----QI 92
+YG + P LH AAR+ + L D NP+ + T +H+ Q+
Sbjct: 165 NYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQL 224
Query: 93 MISEGA---LHPRLA-RPTEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDNKKNTP 148
+++ GA P+ P RR + + + L LD+G A I+ + TP
Sbjct: 225 LLNRGASVNFTPQNGITPLHIASRRGNVIMVRLL-----LDRG----AQIETKTKDELTP 275
Query: 149 LHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKDLALNLESQMVFSRDPE 208
LH AA +G E+L+ HG + A+ +N +P A + H D +++ D E
Sbjct: 276 LHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCV-----RLLLQYDAE 330
Query: 209 AEEIEAEY 216
++I ++
Sbjct: 331 IDDITLDH 338
Score = 43.9 bits (102), Expect = 8e-04
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 48 TPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHPRLARP- 106
TPLH AAR G ++ L + NPN T +H+ + L ++
Sbjct: 472 TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQAC 531
Query: 107 -TEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDNKKN-TPLHYAAASGMKACVELL 164
T+ F L + K+ ++ + ER A K TPLH A V+LL
Sbjct: 532 MTKKGFTP---LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL 588
Query: 165 VKHGGDLFAENENKDTPCDCAEKQHHKDLALNL 197
+ GG + N TP A KQ+ ++A +L
Sbjct: 589 LPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSL 621
Score = 43.1 bits (100), Expect = 0.001
Identities = 41/182 (22%), Positives = 71/182 (39%), Gaps = 35/182 (19%)
Query: 14 NGDENLACQIYENNPQLKESLDP--NTSYGEPYQHNTPLHYAARHGMNKILGTFLGRDGN 71
NG L +N ++ SL ++ E Q TPLH AA+ G +++ L + N
Sbjct: 601 NGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN 660
Query: 72 PNKRNVHNETSMHLLCMGPQIMISEGALHPRLARPTEDDFRRADCLQMILKWKGAKLDQG 131
N N T +HL+ + +++ +++K
Sbjct: 661 GNLGNKSGLTPLHLVAQEGHVPVAD----------------------VLIK--------- 689
Query: 132 EYERAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHK 191
+DA TPLH A+ G V+ L++H D+ A+ + +P A +Q H
Sbjct: 690 --HGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT 747
Query: 192 DL 193
D+
Sbjct: 748 DI 749
Score = 42.4 bits (98), Expect = 0.002
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 48 TPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHPRLARPT 107
TPLH AA++G ++ L RD +PN + T +H+ + I + L PR P
Sbjct: 538 TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVK-LLLPRGGSPH 596
Query: 108 EDDFRRADCLQMILKWKGAKLDQGEYERAAI------DAVDNKKNTPLHYAAASGMKACV 161
+ L + AK +Q E R+ + +A + TPLH AA G V
Sbjct: 597 SPAWNGYTPLHI-----AAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMV 651
Query: 162 ELLVKHGGDLFAENENKDTPCDCAEKQHHKDLA 194
LL+ + N++ TP ++ H +A
Sbjct: 652 ALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVA 684
Score = 36.6 bits (83), Expect = 0.13
Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 22/159 (13%)
Query: 43 PYQHNTPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALH-- 100
P TPLH A+R G ++ L R + T +H + ISE L
Sbjct: 236 PQNGITPLHIASRRGNVIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRISEILLDHG 295
Query: 101 PRLARPTEDDFR---------RADCLQMILKWKGAKLDQGEYERAAIDAVDNKKNTPLHY 151
+ T++ DC++++L++ A ID + TPLH
Sbjct: 296 APIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYD-----------AEIDDITLDHLTPLHV 344
Query: 152 AAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHH 190
AA G ++L+ G + N TP A K++H
Sbjct: 345 AAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNH 383
Score = 36.2 bits (82), Expect = 0.17
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 133 YERAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKD 192
++ ++ K NT LH AA +G V LV +G ++ A+++ TP A +++H +
Sbjct: 66 HKEIILETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLE 125
Query: 193 L 193
+
Sbjct: 126 V 126
Score = 31.2 bits (69), Expect = 5.6
Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 14/154 (9%)
Query: 48 TPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLC-----MGPQIMISEGALHPR 102
TPLH AA + + L R + N + T +H+ + ++++ GA +
Sbjct: 208 TPLHIAAHYENLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGA---Q 264
Query: 103 LARPTEDDFRRADCLQMI--LKWKGAKLDQGEYERAAIDAVDNKKNTPLHYAAASGMKAC 160
+ T+D+ C ++ LD G A I A +P+H AA C
Sbjct: 265 IETKTKDELTPLHCAARNGHVRISEILLDHG----APIQAKTKNGLSPIHMAAQGDHLDC 320
Query: 161 VELLVKHGGDLFAENENKDTPCDCAEKQHHKDLA 194
V LL+++ ++ + TP A H +A
Sbjct: 321 VRLLLQYDAEIDDITLDHLTPLHVAAHCGHHRVA 354
Score = 30.8 bits (68), Expect = 7.3
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 136 AAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKDLAL 195
A ++A K TPL+ AA V+ L+++G + E+ TP A +Q H+++
Sbjct: 102 ANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVA 161
Query: 196 NL 197
+L
Sbjct: 162 HL 163
>gi|70780355 ankyrin 1 isoform 2 [Homo sapiens]
Length = 1719
Score = 51.2 bits (121), Expect = 5e-06
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 46 HNTPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALH--PRL 103
H TPLH AA G +++ L + PN R ++ T +H+ C + + E L +
Sbjct: 338 HLTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHVRVMELLLKTGASI 397
Query: 104 ARPTEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDN-KKNTPLHYAAASGMKACVE 162
TE L + + + +R A V N K TPLH AA +G +
Sbjct: 398 DAVTESGLTP---LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAK 454
Query: 163 LLVKHGGDLFAENENKDTPCDCAEKQHHKDL 193
L+++ + A+ ++ TP CA + H ++
Sbjct: 455 YLLQNKAKVNAKAKDDQTPLHCAARIGHTNM 485
Score = 43.9 bits (102), Expect = 8e-04
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 24/188 (12%)
Query: 39 SYGEPYQHNTP-LHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGP-----QI 92
+YG + P LH AAR+ + L D NP+ + T +H+ Q+
Sbjct: 165 NYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQL 224
Query: 93 MISEGA---LHPRLA-RPTEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDNKKNTP 148
+++ GA P+ P RR + + + L LD+G A I+ + TP
Sbjct: 225 LLNRGASVNFTPQNGITPLHIASRRGNVIMVRLL-----LDRG----AQIETKTKDELTP 275
Query: 149 LHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKDLALNLESQMVFSRDPE 208
LH AA +G E+L+ HG + A+ +N +P A + H D +++ D E
Sbjct: 276 LHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCV-----RLLLQYDAE 330
Query: 209 AEEIEAEY 216
++I ++
Sbjct: 331 IDDITLDH 338
Score = 43.9 bits (102), Expect = 8e-04
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 48 TPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHPRLARP- 106
TPLH AAR G ++ L + NPN T +H+ + L ++
Sbjct: 472 TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQAC 531
Query: 107 -TEDDFRRADCLQMILKWKGAKLDQGEYERAAIDAVDNKKN-TPLHYAAASGMKACVELL 164
T+ F L + K+ ++ + ER A K TPLH A V+LL
Sbjct: 532 MTKKGFTP---LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL 588
Query: 165 VKHGGDLFAENENKDTPCDCAEKQHHKDLALNL 197
+ GG + N TP A KQ+ ++A +L
Sbjct: 589 LPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSL 621
Score = 43.1 bits (100), Expect = 0.001
Identities = 41/182 (22%), Positives = 71/182 (39%), Gaps = 35/182 (19%)
Query: 14 NGDENLACQIYENNPQLKESLDP--NTSYGEPYQHNTPLHYAARHGMNKILGTFLGRDGN 71
NG L +N ++ SL ++ E Q TPLH AA+ G +++ L + N
Sbjct: 601 NGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN 660
Query: 72 PNKRNVHNETSMHLLCMGPQIMISEGALHPRLARPTEDDFRRADCLQMILKWKGAKLDQG 131
N N T +HL+ + +++ +++K
Sbjct: 661 GNLGNKSGLTPLHLVAQEGHVPVAD----------------------VLIK--------- 689
Query: 132 EYERAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHK 191
+DA TPLH A+ G V+ L++H D+ A+ + +P A +Q H
Sbjct: 690 --HGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT 747
Query: 192 DL 193
D+
Sbjct: 748 DI 749
Score = 42.4 bits (98), Expect = 0.002
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 48 TPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHPRLARPT 107
TPLH AA++G ++ L RD +PN + T +H+ + I + L PR P
Sbjct: 538 TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVK-LLLPRGGSPH 596
Query: 108 EDDFRRADCLQMILKWKGAKLDQGEYERAAI------DAVDNKKNTPLHYAAASGMKACV 161
+ L + AK +Q E R+ + +A + TPLH AA G V
Sbjct: 597 SPAWNGYTPLHI-----AAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMV 651
Query: 162 ELLVKHGGDLFAENENKDTPCDCAEKQHHKDLA 194
LL+ + N++ TP ++ H +A
Sbjct: 652 ALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVA 684
Score = 36.6 bits (83), Expect = 0.13
Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 22/159 (13%)
Query: 43 PYQHNTPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALH-- 100
P TPLH A+R G ++ L R + T +H + ISE L
Sbjct: 236 PQNGITPLHIASRRGNVIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRISEILLDHG 295
Query: 101 PRLARPTEDDFR---------RADCLQMILKWKGAKLDQGEYERAAIDAVDNKKNTPLHY 151
+ T++ DC++++L++ A ID + TPLH
Sbjct: 296 APIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYD-----------AEIDDITLDHLTPLHV 344
Query: 152 AAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHH 190
AA G ++L+ G + N TP A K++H
Sbjct: 345 AAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNH 383
Score = 36.2 bits (82), Expect = 0.17
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 133 YERAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKD 192
++ ++ K NT LH AA +G V LV +G ++ A+++ TP A +++H +
Sbjct: 66 HKEIILETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLE 125
Query: 193 L 193
+
Sbjct: 126 V 126
Score = 31.2 bits (69), Expect = 5.6
Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 14/154 (9%)
Query: 48 TPLHYAARHGMNKILGTFLGRDGNPNKRNVHNETSMHLLC-----MGPQIMISEGALHPR 102
TPLH AA + + L R + N + T +H+ + ++++ GA +
Sbjct: 208 TPLHIAAHYENLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGA---Q 264
Query: 103 LARPTEDDFRRADCLQMI--LKWKGAKLDQGEYERAAIDAVDNKKNTPLHYAAASGMKAC 160
+ T+D+ C ++ LD G A I A +P+H AA C
Sbjct: 265 IETKTKDELTPLHCAARNGHVRISEILLDHG----APIQAKTKNGLSPIHMAAQGDHLDC 320
Query: 161 VELLVKHGGDLFAENENKDTPCDCAEKQHHKDLA 194
V LL+++ ++ + TP A H +A
Sbjct: 321 VRLLLQYDAEIDDITLDHLTPLHVAAHCGHHRVA 354
Score = 30.8 bits (68), Expect = 7.3
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 136 AAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDTPCDCAEKQHHKDLAL 195
A ++A K TPL+ AA V+ L+++G + E+ TP A +Q H+++
Sbjct: 102 ANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVA 161
Query: 196 NL 197
+L
Sbjct: 162 HL 163
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,296,531
Number of Sequences: 37866
Number of extensions: 2300957
Number of successful extensions: 10636
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 178
Number of HSP's that attempted gapping in prelim test: 8689
Number of HSP's gapped (non-prelim): 1638
length of query: 1089
length of database: 18,247,518
effective HSP length: 113
effective length of query: 976
effective length of database: 13,968,660
effective search space: 13633412160
effective search space used: 13633412160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.