Guide to the Human Genome
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Name: RNF19A Sequence: fasta or formatted (838aa) NCBI GI: 35493782
Description:

ring finger protein 19

Referenced in:

Ring Finger Proteins

Other entries for this name:
alt mRNA [838aa] ring finger protein 19
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         55           3
 C cysteine            4.2         35           1
 D aspartate           5.4         45           2
 E glutamate           6.0         50           2
 F phenylalanine       2.3         19           1
 G glycine             8.0         67           2
 H histidine           3.0         25           2
 I isoleucine          6.8         57           2
 K lysine              5.6         47           3
 L leucine             6.6         55           2
 M methionine          2.6         22           1
 N asparagine          4.7         39           3
 P proline             3.7         31           1
 Q glutamine           2.7         23           2
 R arginine            5.1         43           2
 S serine             13.2        111           3
 T threonine           4.9         41           2
 V valine              5.8         49           2
 W tryptophan          1.0          8           1
 Y tyrosine            1.9         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 19 
RNF19A                1.000   ring finger protein 19 
RNF19B                0.440   ring finger protein 19B isoform a 
RNF19B                0.417   ring finger protein 19B isoform b 
RNF144A               0.050   ring finger protein 144 
ARIH1                 0.046   ariadne ubiquitin-conjugating enzyme E2 binding pro...
RNF144B               0.044   IBR domain containing 2 
ANKIB1                0.042   ankyrin repeat and IBR domain containing 1 
ARIH2                 0.037   ariadne homolog 2 
CUL9                  0.035   p53-associated parkin-like cytoplasmic protein [Homo...
RNF14                 0.031   ring finger protein 14 isoform 1 
RNF14                 0.031   ring finger protein 14 isoform 1 
RNF14                 0.031   ring finger protein 14 isoform 1 
RNF14                 0.031   ring finger protein 14 isoform 2 
RNF14                 0.031   ring finger protein 14 isoform 1 
RNF216                0.026   ring finger protein 216 isoform b 
RNF216                0.026   ring finger protein 216 isoform a 
RNF31                 0.022   ring finger protein 31 
PARK2                 0.021   parkin isoform 3 
PARK2                 0.021   parkin isoform 2 
PARK2                 0.021   parkin isoform 1 
RBCK1                 0.017   RanBP-type and C3HC4-type zinc finger containing 1 is...
RBCK1                 0.017   RanBP-type and C3HC4-type zinc finger containing 1 ...
RNF217                0.015   ring finger protein 217 
DSPP                  0.013   dentin sialophosphoprotein preproprotein 
CDKN2AIP              0.010   CDKN2A interacting protein 
TRIM22                0.010   tripartite motif-containing 22 
RNF182                0.009   ring finger protein 182 
TRIM10                0.009   tripartite motif-containing 10 isoform 1 
TRIM10                0.009   tripartite motif-containing 10 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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