Guide to the Human Genome
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Name: RNF14 Sequence: fasta or formatted (348aa) NCBI GI: 34577096
Description:

ring finger protein 14 isoform 2

Referenced in:

Ring Finger Proteins

Other entries for this name:
alt prot [474aa] ring finger protein 14 isoform 1
alt prot [474aa] ring finger protein 14 isoform 1
alt prot [474aa] ring finger protein 14 isoform 1
alt prot [474aa] ring finger protein 14 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         19           2
 C cysteine            8.3         29           2
 D aspartate           6.6         23           3
 E glutamate           8.6         30           2
 F phenylalanine       4.6         16           1
 G glycine             4.6         16           2
 H histidine           0.9          3           1
 I isoleucine          4.0         14           1
 K lysine              6.3         22           2
 L leucine             9.8         34           3
 M methionine          2.9         10           1
 N asparagine          3.7         13           1
 P proline             4.6         16           1
 Q glutamine           6.0         21           2
 R arginine            4.3         15           2
 S serine              6.0         21           2
 T threonine           3.2         11           1
 V valine              5.7         20           2
 W tryptophan          0.9          3           1
 Y tyrosine            3.4         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 14 isoform 2 
RNF14                 1.000   ring finger protein 14 isoform 1 
RNF14                 1.000   ring finger protein 14 isoform 1 
RNF14                 1.000   ring finger protein 14 isoform 1 
RNF14                 1.000   ring finger protein 14 isoform 1 
RNF144B               0.117   IBR domain containing 2 
ARIH2                 0.107   ariadne homolog 2 
ARIH1                 0.100   ariadne ubiquitin-conjugating enzyme E2 binding pro...
RNF144A               0.100   ring finger protein 144 
ANKIB1                0.097   ankyrin repeat and IBR domain containing 1 
CUL9                  0.093   p53-associated parkin-like cytoplasmic protein [Homo...
RNF19B                0.075   ring finger protein 19B isoform b 
RNF19B                0.075   ring finger protein 19B isoform a 
PARK2                 0.073   parkin isoform 3 
PARK2                 0.073   parkin isoform 2 
PARK2                 0.073   parkin isoform 1 
RNF19A                0.072   ring finger protein 19 
RNF19A                0.072   ring finger protein 19 
RBCK1                 0.060   RanBP-type and C3HC4-type zinc finger containing 1 is...
RBCK1                 0.060   RanBP-type and C3HC4-type zinc finger containing 1 ...
RNF216                0.055   ring finger protein 216 isoform b 
RNF216                0.055   ring finger protein 216 isoform a 
RNF217                0.034   ring finger protein 217 
RNF31                 0.031   ring finger protein 31 
FBXO43                0.031   F-box protein 43 isoform a 
FBXO43                0.031   F-box protein 43 isoform b 
MLL3                  0.024   myeloid/lymphoid or mixed-lineage leukemia 3 
TRIM3                 0.020   tripartite motif-containing 3 
TRIM3                 0.020   tripartite motif-containing 3 
TRIM72                0.014   tripartite motif-containing 72 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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