Search of human proteins with 146229354

Search of human proteins with 146229354

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|146229354 phospholipid scramblase family, member 5 [Homo
sapiens]
         (271 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|146229354 phospholipid scramblase family, member 5 [Homo sapi...   563   e-161
gi|10863877 phospholipid scramblase 1 [Homo sapiens]                  313   1e-85
gi|9966795 phospholipid scramblase 2 [Homo sapiens]                   298   4e-81
gi|31543417 phospholipid scramblase 3 [Homo sapiens]                  246   2e-65
gi|190341019 phospholipid scramblase 4 isoform a [Homo sapiens]       207   1e-53
gi|190194379 phospholipid scramblase 4 isoform a [Homo sapiens]       207   1e-53
gi|190194377 phospholipid scramblase 4 isoform a [Homo sapiens]       207   1e-53
gi|190194381 phospholipid scramblase 4 isoform b [Homo sapiens]       120   1e-27
gi|239742160 PREDICTED: similar to hCG1794790 [Homo sapiens]           88   7e-18
gi|239748259 PREDICTED: similar to hCG1794790 [Homo sapiens]           85   8e-17
gi|239753717 PREDICTED: similar to hCG1794790 [Homo sapiens]           83   3e-16
gi|62988346 glutamate receptor, ionotropic, N-methyl-D-aspartate...    37   0.024
gi|116174780 SEC24 related gene family, member A [Homo sapiens]        34   0.12 
gi|148839466 kalirin, RhoGEF kinase isoform 1 [Homo sapiens]           32   0.59 
gi|68362740 kalirin, RhoGEF kinase isoform 3 [Homo sapiens]            32   0.59 
gi|56549696 E1A binding protein p400 [Homo sapiens]                    32   0.77 
gi|126116581 retina and anterior neural fold homeobox [Homo sapi...    30   1.7  
gi|29826294 golgi reassembly stacking protein 2 [Homo sapiens]         30   2.2  
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]       30   2.2  
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]       30   2.2  
gi|224458301 family with sequence similarity 186, member A [Homo...    30   2.9  
gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [H...    30   2.9  
gi|237820624 pleckstrin homology domain containing, family N mem...    29   3.8  
gi|237820622 pleckstrin homology domain containing, family N mem...    29   3.8  
gi|148833515 interferon regulatory factor 5 isoform c [Homo sapi...    29   3.8  
gi|148833496 interferon regulatory factor 5 isoform b [Homo sapi...    29   3.8  
gi|148833494 interferon regulatory factor 5 isoform d [Homo sapi...    29   3.8  
gi|148833492 interferon regulatory factor 5 isoform c [Homo sapi...    29   3.8  
gi|148833488 interferon regulatory factor 5 isoform c [Homo sapi...    29   3.8  
gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens]    29   3.8  

>gi|146229354 phospholipid scramblase family, member 5 [Homo
           sapiens]
          Length = 271

 Score =  563 bits (1451), Expect = e-161
 Identities = 271/271 (100%), Positives = 271/271 (100%)

Query: 1   MASKDAQNQRRGLPGFLPGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEY 60
           MASKDAQNQRRGLPGFLPGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEY
Sbjct: 1   MASKDAQNQRRGLPGFLPGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEY 60

Query: 61  LSQLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTFCSTLRSCT 120
           LSQLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTFCSTLRSCT
Sbjct: 61  LSQLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTFCSTLRSCT 120

Query: 121 LRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKWDPFLPKFTIQN 180
           LRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKWDPFLPKFTIQN
Sbjct: 121 LRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKWDPFLPKFTIQN 180

Query: 181 ANKEDILKIVGPCVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTNADNFGIHV 240
           ANKEDILKIVGPCVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTNADNFGIHV
Sbjct: 181 ANKEDILKIVGPCVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTNADNFGIHV 240

Query: 241 PADLDVTVKAAMIGACFLFDFMFFEHSLAGL 271
           PADLDVTVKAAMIGACFLFDFMFFEHSLAGL
Sbjct: 241 PADLDVTVKAAMIGACFLFDFMFFEHSLAGL 271


>gi|10863877 phospholipid scramblase 1 [Homo sapiens]
          Length = 318

 Score =  313 bits (801), Expect = 1e-85
 Identities = 149/250 (59%), Positives = 183/250 (73%), Gaps = 6/250 (2%)

Query: 19  GAPDPDQSL---PASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVEL 75
           G P P+Q +   P  + P   A    +P P    P ++ PPGLEYLSQ+D I+IHQQ+EL
Sbjct: 60  GFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQ---PPLNCPPGLEYLSQIDQILIHQQIEL 116

Query: 76  LGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTFCSTLRSCTLRITDNSGREVITVN 135
           L ++ G ET+NKYEIKNS GQR+YFA E++ C  R  C   R  TLRI DN G+EVIT+ 
Sbjct: 117 LEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQEVITLE 176

Query: 136 RPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKWDPFLPKFTIQNANKEDILKIVGPCVT 195
           RPLRC+SC CPC LQE+EIQAPPG  +GYV Q W P LPKFTIQN  +ED+LKI GPCV 
Sbjct: 177 RPLRCSSCCCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKISGPCVV 236

Query: 196 CGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTNADNFGIHVPADLDVTVKAAMIGA 255
           C C GDVDFE+K+++E+  +GKISK+W+G + + FT+ADNFGI  P DLDV +KA MIGA
Sbjct: 237 CSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKAVMIGA 296

Query: 256 CFLFDFMFFE 265
           CFL DFMFFE
Sbjct: 297 CFLIDFMFFE 306


>gi|9966795 phospholipid scramblase 2 [Homo sapiens]
          Length = 224

 Score =  298 bits (762), Expect = 4e-81
 Identities = 136/218 (62%), Positives = 168/218 (77%)

Query: 50  PTVSLPPGLEYLSQLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFN 109
           P ++ PPGLEYLSQ+D+I+IHQQ+ELL ++   E+SN YEIKNS GQRIYFA E++    
Sbjct: 6   PPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAEDTNFCI 65

Query: 110 RTFCSTLRSCTLRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKW 169
           R  C   R  TLRITDN GREVIT+ RPLRCN C CPC LQE+EIQAPPG  VGYVTQ W
Sbjct: 66  RNCCGRSRPFTLRITDNVGREVITLERPLRCNCCCCPCCLQEIEIQAPPGVPVGYVTQTW 125

Query: 170 DPFLPKFTIQNANKEDILKIVGPCVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDV 229
            P L KFTI+N  +ED+LKI GPC+ C C   VDFE+ +++E++ +G+ISK+WSGF+ + 
Sbjct: 126 HPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQIVVGRISKHWSGFLREA 185

Query: 230 FTNADNFGIHVPADLDVTVKAAMIGACFLFDFMFFEHS 267
           FT+ADNFGI  P DLDV +KA MIGACFL D+MFFE +
Sbjct: 186 FTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFERT 223


>gi|31543417 phospholipid scramblase 3 [Homo sapiens]
          Length = 295

 Score =  246 bits (628), Expect = 2e-65
 Identities = 121/253 (47%), Positives = 166/253 (65%), Gaps = 7/253 (2%)

Query: 13  LPGFLPGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQ 72
           +P  +P AP P  +L  S  P      ++L   + FLP   +P GLE+L Q+D I+IHQ+
Sbjct: 38  VPAQVP-APAPGFALFPSPGP------VALGSAAPFLPLPGVPSGLEFLVQIDQILIHQK 90

Query: 73  VELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTFCSTLRSCTLRITDNSGREVI 132
            E +   LG ET N+YE+++  GQ +  A EES C  R  C   R   +R+ D   REV+
Sbjct: 91  AERVETFLGWETCNRYELRSGAGQPLGQAAEESNCCARLCCGARRPLRVRLADPGDREVL 150

Query: 133 TVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKWDPFLPKFTIQNANKEDILKIVGP 192
            + RPL C    CPC LQE+E+QAPPGT +G+V Q W PFLPKF+IQ+A+++ +L++VGP
Sbjct: 151 RLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHVLQTWHPFLPKFSIQDADRQTVLRVVGP 210

Query: 193 CVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTNADNFGIHVPADLDVTVKAAM 252
           C TCGC  D +FEVKT +E  ++G+ISK W G V +  T+AD+FG+  P DLDV VKA +
Sbjct: 211 CWTCGCGTDTNFEVKTRDESRSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKAVL 270

Query: 253 IGACFLFDFMFFE 265
           +GA FL D+MFFE
Sbjct: 271 LGATFLIDYMFFE 283


>gi|190341019 phospholipid scramblase 4 isoform a [Homo sapiens]
          Length = 329

 Score =  207 bits (526), Expect = 1e-53
 Identities = 110/255 (43%), Positives = 152/255 (59%), Gaps = 17/255 (6%)

Query: 16  FLPGA-PDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVE 74
           + PG  P P+QS+P +  PG               P  + PPGLEYL QLD I + Q  E
Sbjct: 83  YQPGKYPMPNQSVPITWMPGPT-------------PMANCPPGLEYLVQLDNIHVLQHFE 129

Query: 75  LLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTFCSTLRSCTLRITDNSGREVITV 134
            L M+   ET+N+Y+IKN+  Q +Y   E++  F R    TLR   LR+TD  GRE++T+
Sbjct: 130 PLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTDCMGREIMTM 189

Query: 135 NRPLRCNSC--WCPCYLQELEIQAPPGTIVGYVTQKWDPFLPKFTIQNANKEDILKIVGP 192
            RP RC  C   CP   QELE+Q PPG  +G+V + W+     ++IQN  KE+++++ GP
Sbjct: 190 QRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKKENVMRVRGP 249

Query: 193 CVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTNADNFGIHVPADLDVTVKAAM 252
           C T GC  D  FEVK+++    IG I + W+G ++    +AD+F IH P DLDV +KA +
Sbjct: 250 CSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLS-AMADADHFDIHFPLDLDVKMKAMI 308

Query: 253 IGACFLFDFMFFEHS 267
            GACFL DFM+FE S
Sbjct: 309 FGACFLIDFMYFERS 323


>gi|190194379 phospholipid scramblase 4 isoform a [Homo sapiens]
          Length = 329

 Score =  207 bits (526), Expect = 1e-53
 Identities = 110/255 (43%), Positives = 152/255 (59%), Gaps = 17/255 (6%)

Query: 16  FLPGA-PDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVE 74
           + PG  P P+QS+P +  PG               P  + PPGLEYL QLD I + Q  E
Sbjct: 83  YQPGKYPMPNQSVPITWMPGPT-------------PMANCPPGLEYLVQLDNIHVLQHFE 129

Query: 75  LLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTFCSTLRSCTLRITDNSGREVITV 134
            L M+   ET+N+Y+IKN+  Q +Y   E++  F R    TLR   LR+TD  GRE++T+
Sbjct: 130 PLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTDCMGREIMTM 189

Query: 135 NRPLRCNSC--WCPCYLQELEIQAPPGTIVGYVTQKWDPFLPKFTIQNANKEDILKIVGP 192
            RP RC  C   CP   QELE+Q PPG  +G+V + W+     ++IQN  KE+++++ GP
Sbjct: 190 QRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKKENVMRVRGP 249

Query: 193 CVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTNADNFGIHVPADLDVTVKAAM 252
           C T GC  D  FEVK+++    IG I + W+G ++    +AD+F IH P DLDV +KA +
Sbjct: 250 CSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLS-AMADADHFDIHFPLDLDVKMKAMI 308

Query: 253 IGACFLFDFMFFEHS 267
            GACFL DFM+FE S
Sbjct: 309 FGACFLIDFMYFERS 323


>gi|190194377 phospholipid scramblase 4 isoform a [Homo sapiens]
          Length = 329

 Score =  207 bits (526), Expect = 1e-53
 Identities = 110/255 (43%), Positives = 152/255 (59%), Gaps = 17/255 (6%)

Query: 16  FLPGA-PDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVE 74
           + PG  P P+QS+P +  PG               P  + PPGLEYL QLD I + Q  E
Sbjct: 83  YQPGKYPMPNQSVPITWMPGPT-------------PMANCPPGLEYLVQLDNIHVLQHFE 129

Query: 75  LLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTFCSTLRSCTLRITDNSGREVITV 134
            L M+   ET+N+Y+IKN+  Q +Y   E++  F R    TLR   LR+TD  GRE++T+
Sbjct: 130 PLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTDCMGREIMTM 189

Query: 135 NRPLRCNSC--WCPCYLQELEIQAPPGTIVGYVTQKWDPFLPKFTIQNANKEDILKIVGP 192
            RP RC  C   CP   QELE+Q PPG  +G+V + W+     ++IQN  KE+++++ GP
Sbjct: 190 QRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKKENVMRVRGP 249

Query: 193 CVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTNADNFGIHVPADLDVTVKAAM 252
           C T GC  D  FEVK+++    IG I + W+G ++    +AD+F IH P DLDV +KA +
Sbjct: 250 CSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLS-AMADADHFDIHFPLDLDVKMKAMI 308

Query: 253 IGACFLFDFMFFEHS 267
            GACFL DFM+FE S
Sbjct: 309 FGACFLIDFMYFERS 323


>gi|190194381 phospholipid scramblase 4 isoform b [Homo sapiens]
          Length = 239

 Score =  120 bits (302), Expect = 1e-27
 Identities = 55/120 (45%), Positives = 80/120 (66%), Gaps = 1/120 (0%)

Query: 148 YLQELEIQAPPGTIVGYVTQKWDPFLPKFTIQNANKEDILKIVGPCVTCGCFGDVDFEVK 207
           YL +LE+Q PPG  +G+V + W+     ++IQN  KE+++++ GPC T GC  D  FEVK
Sbjct: 115 YLVQLEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVK 174

Query: 208 TINEKLTIGKISKYWSGFVNDVFTNADNFGIHVPADLDVTVKAAMIGACFLFDFMFFEHS 267
           +++    IG I + W+G ++    +AD+F IH P DLDV +KA + GACFL DFM+FE S
Sbjct: 175 SLDGISNIGSIIRKWNGLLS-AMADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFERS 233



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 14/52 (26%)

Query: 16  FLPGA-PDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDL 66
           + PG  P P+QS+P +  PG               P  + PPGLEYL QL++
Sbjct: 83  YQPGKYPMPNQSVPITWMPGPT-------------PMANCPPGLEYLVQLEV 121


>gi|239742160 PREDICTED: similar to hCG1794790 [Homo sapiens]
          Length = 172

 Score = 88.2 bits (217), Expect = 7e-18
 Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 61/213 (28%)

Query: 53  SLPPGLEYLSQLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTF 112
           S P GLEYL Q++ + + Q  + LG++   ETS  YEI N+ GQRIYFA E + CF R  
Sbjct: 18  SCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQGQRIYFAEERNNCFLRHL 77

Query: 113 CSTLRSCTLRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKWDPF 172
           C      T+ I DN GR+V+ +++ L+C+       LQ+L +      ++G +++++  F
Sbjct: 78  CGFSSPFTMTIYDNVGRDVLALHKALKCS-------LQKL-LTLDEEMVIGKISKQYSGF 129

Query: 173 LPKFTIQNANKEDILKIVGPCVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTN 232
           + +  + N  K               FG                                
Sbjct: 130 V-RGILTNGEK---------------FG-------------------------------- 141

Query: 233 ADNFGIHVPADLDVTVKAAMIGACFLFDFMFFE 265
                I  P DLDV +KA M+GA FL ++M+FE
Sbjct: 142 -----IQFPFDLDVKIKALMLGATFLIEYMYFE 169


>gi|239748259 PREDICTED: similar to hCG1794790 [Homo sapiens]
          Length = 172

 Score = 84.7 bits (208), Expect = 8e-17
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 61/213 (28%)

Query: 53  SLPPGLEYLSQLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTF 112
           S P GLEYL Q++ + + Q  + LG++   ETS  YEI N+  QRIYFA E + CF R  
Sbjct: 18  SCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQVQRIYFAEERNNCFLRHL 77

Query: 113 CSTLRSCTLRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKWDPF 172
           C      T+ I DN GR+V+ +++ L+C+       LQ+L +      ++G +++++  F
Sbjct: 78  CGFSSPFTMTIYDNVGRDVLALHKALKCS-------LQKL-LTLDEEMVIGKISKQYSGF 129

Query: 173 LPKFTIQNANKEDILKIVGPCVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTN 232
           + +  + N  K               FG                                
Sbjct: 130 V-RGILTNGEK---------------FG-------------------------------- 141

Query: 233 ADNFGIHVPADLDVTVKAAMIGACFLFDFMFFE 265
                I  P DLDV +KA M+GA FL ++M+FE
Sbjct: 142 -----IQFPFDLDVKIKALMLGATFLIEYMYFE 169


>gi|239753717 PREDICTED: similar to hCG1794790 [Homo sapiens]
          Length = 172

 Score = 82.8 bits (203), Expect = 3e-16
 Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 61/213 (28%)

Query: 53  SLPPGLEYLSQLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTF 112
           S P GLEYL Q++ + + Q  + LG++   ETS  YEI N+  QRIYFA E + CF R  
Sbjct: 18  SCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQVQRIYFAEERNNCFLRHL 77

Query: 113 CSTLRSCTLRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKWDPF 172
           C      T+ I DN GR+V+ +++ L+C+       LQ+L +      ++G +++++  F
Sbjct: 78  CGFSSPFTMTIYDNVGRDVLALHKALKCS-------LQKL-LTLDEEMVIGKISKQYSGF 129

Query: 173 LPKFTIQNANKEDILKIVGPCVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTN 232
           + +  + N  K               FG                                
Sbjct: 130 V-RGILTNGEK---------------FG-------------------------------- 141

Query: 233 ADNFGIHVPADLDVTVKAAMIGACFLFDFMFFE 265
                I  P DLDV +K  M+GA FL ++M+FE
Sbjct: 142 -----IQFPFDLDVKIKXLMLGATFLIEYMYFE 169


>gi|62988346 glutamate receptor, ionotropic, N-methyl-D-aspartate 3B
           [Homo sapiens]
          Length = 1043

 Score = 36.6 bits (83), Expect = 0.024
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 33  PGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDL----IIIHQQVELLGMILGT 82
           P    W L  PLP   LPT  LPPGL  L ++        IH  V+L+   LG+
Sbjct: 253 PPGPHWLLGTPLPPKALPTAGLPPGLLALGEVARPPLEAAIHDIVQLVARALGS 306


>gi|116174780 SEC24 related gene family, member A [Homo sapiens]
          Length = 1093

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 17  LPGAPDPDQSLPASSNPGNQAWQLSLPLP-SSFLPTVSLPPGLEY 60
           L   P P   LPAS NP       + P+P SSFLP  +LPP L +
Sbjct: 100 LHSGPAPRMPLPASQNPA------TTPMPSSSFLPEANLPPPLNW 138


>gi|148839466 kalirin, RhoGEF kinase isoform 1 [Homo sapiens]
          Length = 2986

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 11/102 (10%)

Query: 11   RGLPGFLPGA-PDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIII 69
            R  P  LP A P P  S+PA S    +    + PLP   + T +  PG EY    D    
Sbjct: 2252 RSQPARLPQASPRPYSSVPAGSEKPPKGSSYNPPLPPLKISTSNGSPGFEYHQPGDKFEA 2311

Query: 70   HQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEES-ICFNR 110
             +Q +L G      TS+   IK+      Y+A++E+ IC ++
Sbjct: 2312 SKQNDLGGC---NGTSSMAVIKD------YYALKENEICVSQ 2344


>gi|68362740 kalirin, RhoGEF kinase isoform 3 [Homo sapiens]
          Length = 1289

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 11/102 (10%)

Query: 11  RGLPGFLPGA-PDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIII 69
           R  P  LP A P P  S+PA S    +    + PLP   + T +  PG EY    D    
Sbjct: 555 RSQPARLPQASPRPYSSVPAGSEKPPKGSSYNPPLPPLKISTSNGSPGFEYHQPGDKFEA 614

Query: 70  HQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEES-ICFNR 110
            +Q +L G      TS+   IK+      Y+A++E+ IC ++
Sbjct: 615 SKQNDLGGC---NGTSSMAVIKD------YYALKENEICVSQ 647


>gi|56549696 E1A binding protein p400 [Homo sapiens]
          Length = 3122

 Score = 31.6 bits (70), Expect = 0.77
 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)

Query: 18   PGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPP 56
            PGAP+P Q +PASS+  +Q  +L + +P+  L T + PP
Sbjct: 3083 PGAPNPAQ-VPASSDSPSQQPKLQMRVPAVRLKTPTKPP 3120


>gi|126116581 retina and anterior neural fold homeobox [Homo
           sapiens]
          Length = 346

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 8/46 (17%)

Query: 17  LPGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLS 62
           LPG   P QSLPAS  P         P P  FL +  L PGL+ L+
Sbjct: 260 LPGFGPPAQSLPASYTPP--------PPPPPFLNSPPLGPGLQPLA 297


>gi|29826294 golgi reassembly stacking protein 2 [Homo sapiens]
          Length = 452

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 6/46 (13%)

Query: 12  GLPGFL-PGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPP 56
           GLP  + PG P P  S+P  + PG       LPLPS FLP+  L P
Sbjct: 332 GLPELVNPGLP-PLPSMPPRNLPGIAP----LPLPSEFLPSFPLVP 372


>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
          Length = 788

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 1   MASKDAQNQRRGLPGFLPGAPDPD-QSLPASSNPGNQAWQLSLPLPSSFLPTVSLPP 56
           M S  +  Q+   P  +P  P P  Q    SS P +       P PSSFLP+ S  P
Sbjct: 432 MLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQP 488


>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
          Length = 748

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 1   MASKDAQNQRRGLPGFLPGAPDPD-QSLPASSNPGNQAWQLSLPLPSSFLPTVSLPP 56
           M S  +  Q+   P  +P  P P  Q    SS P +       P PSSFLP+ S  P
Sbjct: 392 MLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQP 448


>gi|224458301 family with sequence similarity 186, member A [Homo
            sapiens]
          Length = 2351

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 17   LPGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVELL 76
            +P  P   Q+L  S  P  QA +L +PL       + +   L+   QL + +  QQ + L
Sbjct: 1193 IPLTPQQAQALRVSLTP-QQAQELGIPLTPQQAQALGITLTLQQAQQLGIPLTPQQAQAL 1251

Query: 77   GMIL 80
            G+ L
Sbjct: 1252 GITL 1255



 Score = 28.5 bits (62), Expect = 6.5
 Identities = 15/55 (27%), Positives = 27/55 (49%)

Query: 36   QAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVELLGMILGTETSNKYEI 90
            QA +L +PL       + +P   +   +L + +  QQ + LGM L T+ + +  I
Sbjct: 1355 QAQELGIPLTPQHAQALGMPLTTQQAQELGIPLTPQQAQALGMPLTTQQAQELGI 1409



 Score = 28.1 bits (61), Expect = 8.5
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 17   LPGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVELL 76
            +P  P   Q+L  +  P  QA +L +PL      T+ +P   +    L +    QQ + L
Sbjct: 1265 IPLTPQQAQALGITLTP-KQAQELGIPLNPQQAQTLGIPLTPKQAQALGIPFTPQQAQAL 1323

Query: 77   GMILGTETSNKYEI 90
            G+ L  + +   EI
Sbjct: 1324 GIPLTPQQAQTQEI 1337


>gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [Homo
            sapiens]
          Length = 4515

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 7/83 (8%)

Query: 171  PFLPKFTIQNANKEDILKIVGP-CVTCGCFGDVDFEVKTINEKLTIGKI-SKYWSGFVND 228
            P  P  T +    +D+ K +G  CV   CF D+D++   I  K   G + S  WS F  D
Sbjct: 1546 PAGPAGTGKTETVKDLAKSLGKHCVVFNCFEDLDYK---IVRKFFFGLVQSGAWSCF--D 1600

Query: 229  VFTNADNFGIHVPADLDVTVKAA 251
             F   D   + V A   +T+KAA
Sbjct: 1601 EFNLIDLEVLSVIASQILTIKAA 1623


>gi|237820624 pleckstrin homology domain containing, family N member
           1 isoform b [Homo sapiens]
          Length = 576

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 1   MASKDAQNQRRGLPGFLPGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEY 60
           + S+ AQ  R       P  PD  Q + ++     + W   LPL     P  S  PG ++
Sbjct: 491 LQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPW---LPLTDGRSPRRSRDPGYDH 547

Query: 61  LSQLDLIIIHQQVELLG 77
           L    L   HQ+   LG
Sbjct: 548 LWDETLSSSHQKCPQLG 564


>gi|237820622 pleckstrin homology domain containing, family N member
           1 isoform a [Homo sapiens]
          Length = 611

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 1   MASKDAQNQRRGLPGFLPGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEY 60
           + S+ AQ  R       P  PD  Q + ++     + W   LPL     P  S  PG ++
Sbjct: 526 LQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPW---LPLTDGRSPRRSRDPGYDH 582

Query: 61  LSQLDLIIIHQQVELLG 77
           L    L   HQ+   LG
Sbjct: 583 LWDETLSSSHQKCPQLG 599


>gi|148833515 interferon regulatory factor 5 isoform c [Homo
           sapiens]
          Length = 488

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 6/92 (6%)

Query: 18  PGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVELLG 77
           P APDP    P   NP      LS  L    LP  SLPP  E L   DL+I    + L  
Sbjct: 182 PPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP-ASLPPAGEQLLP-DLLISPHMLPLTD 239

Query: 78  MILGTETSNK----YEIKNSLGQRIYFAVEES 105
           + +  +   +      I N  G R++++  E+
Sbjct: 240 LEIKFQYRGRPPRALTISNPHGCRLFYSQLEA 271


>gi|148833496 interferon regulatory factor 5 isoform b [Homo
           sapiens]
          Length = 498

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 6/92 (6%)

Query: 18  PGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVELLG 77
           P APDP    P   NP      LS  L    LP  SLPP  E L   DL+I    + L  
Sbjct: 192 PPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP-ASLPPAGEQLLP-DLLISPHMLPLTD 249

Query: 78  MILGTETSNK----YEIKNSLGQRIYFAVEES 105
           + +  +   +      I N  G R++++  E+
Sbjct: 250 LEIKFQYRGRPPRALTISNPHGCRLFYSQLEA 281


>gi|148833494 interferon regulatory factor 5 isoform d [Homo
           sapiens]
          Length = 514

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 6/92 (6%)

Query: 18  PGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVELLG 77
           P APDP    P   NP      LS  L    LP  SLPP  E L   DL+I    + L  
Sbjct: 208 PPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP-ASLPPAGEQLLP-DLLISPHMLPLTD 265

Query: 78  MILGTETSNK----YEIKNSLGQRIYFAVEES 105
           + +  +   +      I N  G R++++  E+
Sbjct: 266 LEIKFQYRGRPPRALTISNPHGCRLFYSQLEA 297


>gi|148833492 interferon regulatory factor 5 isoform c [Homo
           sapiens]
          Length = 488

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 6/92 (6%)

Query: 18  PGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVELLG 77
           P APDP    P   NP      LS  L    LP  SLPP  E L   DL+I    + L  
Sbjct: 182 PPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP-ASLPPAGEQLLP-DLLISPHMLPLTD 239

Query: 78  MILGTETSNK----YEIKNSLGQRIYFAVEES 105
           + +  +   +      I N  G R++++  E+
Sbjct: 240 LEIKFQYRGRPPRALTISNPHGCRLFYSQLEA 271


>gi|148833488 interferon regulatory factor 5 isoform c [Homo
           sapiens]
          Length = 488

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 6/92 (6%)

Query: 18  PGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVELLG 77
           P APDP    P   NP      LS  L    LP  SLPP  E L   DL+I    + L  
Sbjct: 182 PPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP-ASLPPAGEQLLP-DLLISPHMLPLTD 239

Query: 78  MILGTETSNK----YEIKNSLGQRIYFAVEES 105
           + +  +   +      I N  G R++++  E+
Sbjct: 240 LEIKFQYRGRPPRALTISNPHGCRLFYSQLEA 271


>gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens]
          Length = 498

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 6/92 (6%)

Query: 18  PGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVELLG 77
           P APDP    P   NP      LS  L    LP  SLPP  E L   DL+I    + L  
Sbjct: 192 PPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP-ASLPPAGEQLLP-DLLISPHMLPLTD 249

Query: 78  MILGTETSNK----YEIKNSLGQRIYFAVEES 105
           + +  +   +      I N  G R++++  E+
Sbjct: 250 LEIKFQYRGRPPRALTISNPHGCRLFYSQLEA 281


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.139    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,352,844
Number of Sequences: 37866
Number of extensions: 555289
Number of successful extensions: 1663
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1618
Number of HSP's gapped (non-prelim): 65
length of query: 271
length of database: 18,247,518
effective HSP length: 101
effective length of query: 170
effective length of database: 14,423,052
effective search space: 2451918840
effective search space used: 2451918840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.