Guide to the Human Genome
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Name: KCTD4 Sequence: fasta or formatted (259aa) NCBI GI: 146198864
Description:

potassium channel tetramerisation domain containing 4

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1          8           1
 C cysteine            2.3          6           1
 D aspartate           5.4         14           1
 E glutamate           9.3         24           2
 F phenylalanine       7.3         19           2
 G glycine             6.2         16           2
 H histidine           2.3          6           1
 I isoleucine          6.6         17           2
 K lysine              8.5         22           1
 L leucine            12.4         32           3
 M methionine          1.5          4           2
 N asparagine          5.0         13           1
 P proline             2.3          6           1
 Q glutamine           3.5          9           1
 R arginine            5.8         15           2
 S serine              6.2         16           2
 T threonine           6.2         16           2
 V valine              3.5          9           1
 W tryptophan          0.4          1           1
 Y tyrosine            2.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel tetramerisation domain containing... 
KCTD6                 0.145   potassium channel tetramerisation domain containing...
KCTD6                 0.145   potassium channel tetramerisation domain containing...
KCTD21                0.143   potassium channel tetramerisation domain containing ...
KCTD15                0.135   potassium channel tetramerisation domain containing...
KCTD15                0.135   potassium channel tetramerisation domain containing...
KCTD15                0.135   potassium channel tetramerisation domain containing...
KCTD1                 0.127   potassium channel tetramerisation domain containing...
KCTD1                 0.127   potassium channel tetramerisation domain containing...
KCTD1                 0.127   potassium channel tetramerisation domain containing ...
KCTD8                 0.110   potassium channel tetramerisation domain containing ...
KCTD10                0.102   potassium channel tetramerisation domain containing ...
KCTD12                0.094   potassium channel tetramerisation domain containing ...
KCTD11                0.094   potassium channel tetramerisation domain containing ...
KCTD16                0.092   potassium channel tetramerisation domain containing ...
KCTD7                 0.088   potassium channel tetramerisation domain containing ...
KCTD17                0.088   potassium channel tetramerisation domain containing...
SHKBP1                0.086   SH3KBP1 binding protein 1 
KCTD13                0.084   potassium channel tetramerisation domain containing ...
KCNRG                 0.082   potassium channel regulator isoform 2 
KCNRG                 0.082   potassium channel regulator isoform 1 
KCTD18                0.074   potassium channel tetramerization domain containing ...
KCTD19                0.074   potassium channel tetramerisation domain containing...
KCTD5                 0.074   potassium channel tetramerisation domain containing 5...
TNFAIP1               0.074   tumor necrosis factor, alpha-induced protein 1 [Homo...
KCTD3                 0.074   potassium channel tetramerisation domain containing ...
KCTD2                 0.072   potassium channel tetramerisation domain containing ...
KCTD14                0.068   potassium channel tetramerisation domain containing...
KCND1                 0.062   potassium voltage-gated channel, Shal-related subfam...
KCND2                 0.058   potassium voltage-gated channel, Shal-related subfami...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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