Guide to the Human Genome
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Name: KCTD16 Sequence: fasta or formatted (428aa) NCBI GI: 55926200
Description:

potassium channel tetramerisation domain containing 16

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         16           1
 C cysteine            3.5         15           3
 D aspartate           6.8         29           2
 E glutamate           7.2         31           3
 F phenylalanine       5.1         22           2
 G glycine             5.4         23           2
 H histidine           2.1          9           1
 I isoleucine          4.4         19           1
 K lysine              7.0         30           3
 L leucine             8.4         36           2
 M methionine          1.4          6           1
 N asparagine          2.6         11           1
 P proline             5.8         25           2
 Q glutamine           4.0         17           2
 R arginine            8.2         35           2
 S serine             10.7         46           2
 T threonine           4.7         20           1
 V valine              4.4         19           2
 W tryptophan          1.2          5           1
 Y tyrosine            3.3         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel tetramerisation domain containing ... 
KCTD8                 0.547   potassium channel tetramerisation domain containing ...
KCTD12                0.338   potassium channel tetramerisation domain containing ...
KCTD21                0.078   potassium channel tetramerisation domain containing ...
KCNRG                 0.066   potassium channel regulator isoform 2 
KCNRG                 0.066   potassium channel regulator isoform 1 
KCTD6                 0.064   potassium channel tetramerisation domain containing...
KCTD6                 0.064   potassium channel tetramerisation domain containing...
KCTD14                0.054   potassium channel tetramerisation domain containing...
KCTD4                 0.054   potassium channel tetramerisation domain containing...
KCTD1                 0.052   potassium channel tetramerisation domain containing...
KCTD1                 0.052   potassium channel tetramerisation domain containing...
KCTD1                 0.052   potassium channel tetramerisation domain containing ...
KCTD15                0.051   potassium channel tetramerisation domain containing...
KCTD15                0.051   potassium channel tetramerisation domain containing...
KCTD15                0.051   potassium channel tetramerisation domain containing...
KCTD5                 0.047   potassium channel tetramerisation domain containing 5...
KCTD18                0.045   potassium channel tetramerization domain containing ...
KCTD7                 0.045   potassium channel tetramerisation domain containing ...
KCTD2                 0.038   potassium channel tetramerisation domain containing ...
KCTD3                 0.036   potassium channel tetramerisation domain containing ...
KCTD10                0.035   potassium channel tetramerisation domain containing ...
KCTD13                0.035   potassium channel tetramerisation domain containing ...
TNFAIP1               0.034   tumor necrosis factor, alpha-induced protein 1 [Homo...
SHKBP1                0.034   SH3KBP1 binding protein 1 
KCTD17                0.033   potassium channel tetramerisation domain containing...
KCTD9                 0.033   potassium channel tetramerisation domain containing ...
KCTD11                0.028   potassium channel tetramerisation domain containing ...
LOC647013             0.027   PREDICTED: similar to potassium channel tetramerisa...
LOC647013             0.027   PREDICTED: similar to potassium channel tetramerisa...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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