Guide to the Human Genome
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Name: KCTD12 Sequence: fasta or formatted (325aa) NCBI GI: 19923973
Description:

potassium channel tetramerisation domain containing 12

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         21           2
 C cysteine            1.5          5           1
 D aspartate           5.8         19           1
 E glutamate           6.8         22           1
 F phenylalanine       4.9         16           2
 G glycine            10.5         34           7
 H histidine           0.6          2           1
 I isoleucine          2.2          7           1
 K lysine              2.5          8           1
 L leucine             9.8         32           2
 M methionine          0.9          3           1
 N asparagine          1.2          4           1
 P proline             7.7         25           3
 Q glutamine           4.6         15           3
 R arginine            8.9         29           2
 S serine             10.8         35           5
 T threonine           5.2         17           1
 V valine              4.6         15           2
 W tryptophan          0.6          2           1
 Y tyrosine            4.3         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel tetramerisation domain containing ... 
KCTD8                 0.457   potassium channel tetramerisation domain containing ...
KCTD16                0.457   potassium channel tetramerisation domain containing ...
KCTD21                0.099   potassium channel tetramerisation domain containing ...
KCTD6                 0.094   potassium channel tetramerisation domain containing...
KCTD6                 0.094   potassium channel tetramerisation domain containing...
KCTD15                0.085   potassium channel tetramerisation domain containing...
KCTD15                0.085   potassium channel tetramerisation domain containing...
KCTD15                0.085   potassium channel tetramerisation domain containing...
KCNRG                 0.079   potassium channel regulator isoform 2 
KCNRG                 0.079   potassium channel regulator isoform 1 
KCTD4                 0.074   potassium channel tetramerisation domain containing...
KCTD1                 0.074   potassium channel tetramerisation domain containing...
KCTD1                 0.074   potassium channel tetramerisation domain containing...
KCTD1                 0.074   potassium channel tetramerisation domain containing ...
KCTD18                0.068   potassium channel tetramerization domain containing ...
KCTD14                0.063   potassium channel tetramerisation domain containing...
KCTD7                 0.058   potassium channel tetramerisation domain containing ...
KCTD2                 0.058   potassium channel tetramerisation domain containing ...
KCTD5                 0.054   potassium channel tetramerisation domain containing 5...
KCTD3                 0.049   potassium channel tetramerisation domain containing ...
KCTD9                 0.049   potassium channel tetramerisation domain containing ...
KCTD17                0.046   potassium channel tetramerisation domain containing...
KCTD10                0.046   potassium channel tetramerisation domain containing ...
SHKBP1                0.044   SH3KBP1 binding protein 1 
TNFAIP1               0.043   tumor necrosis factor, alpha-induced protein 1 [Homo...
KCTD13                0.038   potassium channel tetramerisation domain containing ...
KCTD11                0.038   potassium channel tetramerisation domain containing ...
LOC647013             0.036   PREDICTED: similar to potassium channel tetramerisa...
LOC647013             0.036   PREDICTED: similar to potassium channel tetramerisa...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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