Guide to the Human Genome
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Name: KCTD11 Sequence: fasta or formatted (232aa) NCBI GI: 51036594
Description:

potassium channel tetramerisation domain containing 11

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         20           2
 C cysteine            0.9          2           1
 D aspartate           5.6         13           1
 E glutamate           7.3         17           2
 F phenylalanine       6.0         14           1
 G glycine             9.5         22           3
 H histidine           4.3         10           2
 I isoleucine          1.3          3           1
 K lysine              0.4          1           1
 L leucine            13.8         32           2
 M methionine          1.3          3           1
 N asparagine          2.2          5           1
 P proline             7.8         18           2
 Q glutamine           2.2          5           1
 R arginine           10.8         25           2
 S serine              5.6         13           2
 T threonine           3.4          8           1
 V valine              6.0         14           2
 W tryptophan          0.9          2           1
 Y tyrosine            2.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel tetramerisation domain containing ... 
KCTD21                0.283   potassium channel tetramerisation domain containing ...
KCTD6                 0.108   potassium channel tetramerisation domain containing...
KCTD6                 0.108   potassium channel tetramerisation domain containing...
KCTD4                 0.104   potassium channel tetramerisation domain containing...
KCTD15                0.075   potassium channel tetramerisation domain containing...
KCTD15                0.075   potassium channel tetramerisation domain containing...
KCTD15                0.075   potassium channel tetramerisation domain containing...
KCTD1                 0.073   potassium channel tetramerisation domain containing...
KCTD1                 0.073   potassium channel tetramerisation domain containing...
KCTD1                 0.073   potassium channel tetramerisation domain containing ...
KCTD7                 0.064   potassium channel tetramerisation domain containing ...
KCTD19                0.060   potassium channel tetramerisation domain containing...
KCNRG                 0.055   potassium channel regulator isoform 2 
KCNRG                 0.055   potassium channel regulator isoform 1 
KCTD16                0.053   potassium channel tetramerisation domain containing ...
KCTD12                0.053   potassium channel tetramerisation domain containing ...
KCTD17                0.044   potassium channel tetramerisation domain containing...
KCTD8                 0.044   potassium channel tetramerisation domain containing ...
KCTD3                 0.044   potassium channel tetramerisation domain containing ...
SHKBP1                0.040   SH3KBP1 binding protein 1 
KCND1                 0.038   potassium voltage-gated channel, Shal-related subfam...
KCTD13                0.038   potassium channel tetramerisation domain containing ...
KCTD2                 0.035   potassium channel tetramerisation domain containing ...
KCTD5                 0.033   potassium channel tetramerisation domain containing 5...
KCTD10                0.033   potassium channel tetramerisation domain containing ...
KCND2                 0.031   potassium voltage-gated channel, Shal-related subfami...
KCTD14                0.031   potassium channel tetramerisation domain containing...
TNFAIP1               0.029   tumor necrosis factor, alpha-induced protein 1 [Homo...
KCND3                 0.029   potassium voltage-gated channel, Shal-related subfam...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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