Guide to the Human Genome
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Name: KCTD21 Sequence: fasta or formatted (260aa) NCBI GI: 71143104
Description:

potassium channel tetramerisation domain containing 21

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         12           1
 C cysteine            1.5          4           1
 D aspartate           5.0         13           1
 E glutamate           6.2         16           3
 F phenylalanine       6.2         16           1
 G glycine             4.2         11           2
 H histidine           2.3          6           1
 I isoleucine          5.4         14           2
 K lysine              5.4         14           1
 L leucine            12.7         33           2
 M methionine          3.1          8           1
 N asparagine          6.5         17           2
 P proline             3.8         10           1
 Q glutamine           4.6         12           1
 R arginine            4.6         12           2
 S serine              9.2         24           4
 T threonine           5.4         14           2
 V valine              5.8         15           2
 W tryptophan          0.8          2           1
 Y tyrosine            2.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel tetramerisation domain containing ... 
KCTD11                0.259   potassium channel tetramerisation domain containing ...
KCTD6                 0.253   potassium channel tetramerisation domain containing...
KCTD6                 0.253   potassium channel tetramerisation domain containing...
KCTD15                0.164   potassium channel tetramerisation domain containing...
KCTD15                0.164   potassium channel tetramerisation domain containing...
KCTD15                0.164   potassium channel tetramerisation domain containing...
KCTD1                 0.156   potassium channel tetramerisation domain containing...
KCTD1                 0.156   potassium channel tetramerisation domain containing...
KCTD1                 0.156   potassium channel tetramerisation domain containing ...
KCTD4                 0.143   potassium channel tetramerisation domain containing...
KCTD16                0.135   potassium channel tetramerisation domain containing ...
KCTD12                0.127   potassium channel tetramerisation domain containing ...
KCTD8                 0.127   potassium channel tetramerisation domain containing ...
KCTD13                0.123   potassium channel tetramerisation domain containing ...
KCNRG                 0.119   potassium channel regulator isoform 2 
KCNRG                 0.119   potassium channel regulator isoform 1 
KCTD10                0.119   potassium channel tetramerisation domain containing ...
SHKBP1                0.117   SH3KBP1 binding protein 1 
KCTD18                0.115   potassium channel tetramerization domain containing ...
KCTD7                 0.111   potassium channel tetramerisation domain containing ...
KCTD3                 0.111   potassium channel tetramerisation domain containing ...
KCTD14                0.109   potassium channel tetramerisation domain containing...
TNFAIP1               0.107   tumor necrosis factor, alpha-induced protein 1 [Homo...
KCTD9                 0.079   potassium channel tetramerisation domain containing ...
KCTD17                0.079   potassium channel tetramerisation domain containing...
LOC647013             0.065   PREDICTED: similar to potassium channel tetramerisa...
LOC647013             0.065   PREDICTED: similar to potassium channel tetramerisa...
LOC647013             0.065   PREDICTED: similar to potassium channel tetramerisa...
KCTD5                 0.061   potassium channel tetramerisation domain containing 5...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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