Guide to the Human Genome
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Name: KCTD8 Sequence: fasta or formatted (473aa) NCBI GI: 38198663
Description:

potassium channel tetramerisation domain containing 8

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         34           4
 C cysteine            1.7          8           1
 D aspartate           6.3         30           2
 E glutamate           6.3         30           3
 F phenylalanine       4.4         21           2
 G glycine             7.0         33           7
 H histidine           1.9          9           1
 I isoleucine          2.7         13           1
 K lysine              6.8         32           3
 L leucine             8.5         40           3
 M methionine          1.3          6           1
 N asparagine          2.7         13           1
 P proline             6.6         31           3
 Q glutamine           4.9         23           2
 R arginine            7.0         33           3
 S serine             11.2         53           5
 T threonine           5.1         24           2
 V valine              4.9         23           2
 W tryptophan          0.6          3           1
 Y tyrosine            3.0         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel tetramerisation domain containing ... 
KCTD16                0.506   potassium channel tetramerisation domain containing ...
KCTD12                0.312   potassium channel tetramerisation domain containing ...
KCTD21                0.068   potassium channel tetramerisation domain containing ...
KCTD6                 0.062   potassium channel tetramerisation domain containing...
KCTD6                 0.062   potassium channel tetramerisation domain containing...
KCTD4                 0.059   potassium channel tetramerisation domain containing...
KCTD14                0.056   potassium channel tetramerisation domain containing...
KCNRG                 0.055   potassium channel regulator isoform 2 
KCNRG                 0.055   potassium channel regulator isoform 1 
KCTD7                 0.054   potassium channel tetramerisation domain containing ...
KCTD15                0.053   potassium channel tetramerisation domain containing...
KCTD15                0.053   potassium channel tetramerisation domain containing...
KCTD15                0.053   potassium channel tetramerisation domain containing...
KCTD1                 0.047   potassium channel tetramerisation domain containing...
KCTD1                 0.047   potassium channel tetramerisation domain containing...
KCTD1                 0.047   potassium channel tetramerisation domain containing ...
KCTD10                0.042   potassium channel tetramerisation domain containing ...
SHKBP1                0.040   SH3KBP1 binding protein 1 
KCTD2                 0.039   potassium channel tetramerisation domain containing ...
KCTD18                0.038   potassium channel tetramerization domain containing ...
KCTD13                0.037   potassium channel tetramerisation domain containing ...
KCTD3                 0.036   potassium channel tetramerisation domain containing ...
KCTD5                 0.034   potassium channel tetramerisation domain containing 5...
TNFAIP1               0.031   tumor necrosis factor, alpha-induced protein 1 [Homo...
KCTD17                0.029   potassium channel tetramerisation domain containing...
KCTD9                 0.027   potassium channel tetramerisation domain containing ...
LOC647013             0.024   PREDICTED: similar to potassium channel tetramerisa...
LOC647013             0.024   PREDICTED: similar to potassium channel tetramerisa...
LOC647013             0.024   PREDICTED: similar to potassium channel tetramerisa...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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