Guide to the Human Genome
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Name: ASPHD2 Sequence: fasta or formatted (369aa) NCBI GI: 194328779
Description:

aspartate beta-hydroxylase domain containing 2

Referenced in:

Additional Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         21           3
 C cysteine            5.1         19           1
 D aspartate           4.1         15           2
 E glutamate           5.1         19           1
 F phenylalanine       4.3         16           2
 G glycine             7.3         27           2
 H histidine           3.0         11           1
 I isoleucine          3.5         13           1
 K lysine              3.0         11           1
 L leucine             9.8         36           2
 M methionine          1.6          6           1
 N asparagine          4.9         18           2
 P proline             6.5         24           2
 Q glutamine           4.1         15           1
 R arginine            6.5         24           1
 S serine              6.2         23           1
 T threonine           5.4         20           2
 V valine              7.3         27           2
 W tryptophan          2.7         10           1
 Y tyrosine            3.8         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aspartate beta-hydroxylase domain containing 2 [Hom... 
ASPHD1                0.336   aspartate beta-hydroxylase domain containing 1 [Homo...
ASPH                  0.102   aspartate beta-hydroxylase isoform a 
LOC100293484          0.007   PREDICTED: hypothetical protein 
LOC100289909          0.007   PREDICTED: hypothetical protein XP_002348167 
UBE2NL                0.007   ubiquitin-conjugating enzyme E2N-like 
KIAA2018              0.005   hypothetical protein LOC205717 
ZNF425                0.005   zinc finger protein 425 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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