Guide to the Human Genome
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Search of human proteins with 145580578

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|145580578 C-terminal binding protein 2 isoform 1 [Homo
sapiens]
         (445 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|145580578 C-terminal binding protein 2 isoform 1 [Homo sapiens]    898   0.0  
gi|4557499 C-terminal binding protein 2 isoform 1 [Homo sapiens]      898   0.0  
gi|145580575 C-terminal binding protein 2 isoform 2 [Homo sapiens]    858   0.0  
gi|61743967 C-terminal binding protein 1 isoform 2 [Homo sapiens]     725   0.0  
gi|4557497 C-terminal binding protein 1 isoform 1 [Homo sapiens]      725   0.0  
gi|23308577 phosphoglycerate dehydrogenase [Homo sapiens]             138   1e-32
gi|6912396 glyoxylate reductase/hydroxypyruvate reductase [Homo ...    86   7e-17
gi|23957680 ral guanine nucleotide dissociation stimulator-like ...    34   0.31 
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]            33   0.52 
gi|238624188 diffuse panbronchiolitis critical region 1 protein ...    32   0.89 
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit...    32   0.89 
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    32   1.5  
gi|198041703 solute carrier family 22 (organic cation transporte...    31   2.6  
gi|195972857 Rho/Rac guanine nucleotide exchange factor 18 isofo...    30   3.4  
gi|41327769 Rho/Rac guanine nucleotide exchange factor 18 isofor...    30   3.4  
gi|4759156 small nuclear ribonucleoprotein polypeptide A [Homo s...    30   3.4  
gi|46049063 exportin 6 [Homo sapiens]                                  30   3.4  
gi|157502173 hypothetical protein LOC348487 [Homo sapiens]             30   4.4  
gi|50345831 forkhead box J3 [Homo sapiens]                             30   4.4  
gi|83367077 mucin 16 [Homo sapiens]                                    30   5.8  
gi|239741018 PREDICTED: hypothetical protein XP_002342056 [Homo ...    30   5.8  
gi|19923597 Sin3A-associated protein, 130kDa isoform b [Homo sap...    30   5.8  
gi|225579127 Sin3A-associated protein, 130kDa isoform a [Homo sa...    30   5.8  
gi|116292174 fidgetin-like 2 [Homo sapiens]                            30   5.8  
gi|64084766 fidgetin [Homo sapiens]                                    30   5.8  
gi|31543535 R3H domain containing 1 [Homo sapiens]                     30   5.8  
gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo s...    30   5.8  
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s...    30   5.8  
gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo s...    30   5.8  
gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo s...    30   5.8  

>gi|145580578 C-terminal binding protein 2 isoform 1 [Homo sapiens]
          Length = 445

 Score =  898 bits (2320), Expect = 0.0
 Identities = 445/445 (100%), Positives = 445/445 (100%)

Query: 1   MALVDKHKVKRQRLDRICEGIRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFC 60
           MALVDKHKVKRQRLDRICEGIRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFC
Sbjct: 1   MALVDKHKVKRQRLDRICEGIRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFC 60

Query: 61  DAQSTQEIHEKVLNEAVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELG 120
           DAQSTQEIHEKVLNEAVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELG
Sbjct: 61  DAQSTQEIHEKVLNEAVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELG 120

Query: 121 IAVCNIPSAAVEETADSTICHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRG 180
           IAVCNIPSAAVEETADSTICHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRG
Sbjct: 121 IAVCNIPSAAVEETADSTICHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRG 180

Query: 181 ETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVS 240
           ETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVS
Sbjct: 181 ETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVS 240

Query: 241 LHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHES 300
           LHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHES
Sbjct: 241 LHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHES 300

Query: 301 EPFSFAQGPLKDAPNLICTPHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKE 360
           EPFSFAQGPLKDAPNLICTPHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKE
Sbjct: 301 EPFSFAQGPLKDAPNLICTPHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKE 360

Query: 361 FFVTSAPWSVIDQQAIHPELNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTV 420
           FFVTSAPWSVIDQQAIHPELNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTV
Sbjct: 361 FFVTSAPWSVIDQQAIHPELNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTV 420

Query: 421 AHPSQAPSPNQPTKHGDNREHPNEQ 445
           AHPSQAPSPNQPTKHGDNREHPNEQ
Sbjct: 421 AHPSQAPSPNQPTKHGDNREHPNEQ 445


>gi|4557499 C-terminal binding protein 2 isoform 1 [Homo sapiens]
          Length = 445

 Score =  898 bits (2320), Expect = 0.0
 Identities = 445/445 (100%), Positives = 445/445 (100%)

Query: 1   MALVDKHKVKRQRLDRICEGIRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFC 60
           MALVDKHKVKRQRLDRICEGIRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFC
Sbjct: 1   MALVDKHKVKRQRLDRICEGIRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFC 60

Query: 61  DAQSTQEIHEKVLNEAVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELG 120
           DAQSTQEIHEKVLNEAVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELG
Sbjct: 61  DAQSTQEIHEKVLNEAVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELG 120

Query: 121 IAVCNIPSAAVEETADSTICHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRG 180
           IAVCNIPSAAVEETADSTICHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRG
Sbjct: 121 IAVCNIPSAAVEETADSTICHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRG 180

Query: 181 ETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVS 240
           ETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVS
Sbjct: 181 ETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVS 240

Query: 241 LHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHES 300
           LHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHES
Sbjct: 241 LHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHES 300

Query: 301 EPFSFAQGPLKDAPNLICTPHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKE 360
           EPFSFAQGPLKDAPNLICTPHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKE
Sbjct: 301 EPFSFAQGPLKDAPNLICTPHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKE 360

Query: 361 FFVTSAPWSVIDQQAIHPELNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTV 420
           FFVTSAPWSVIDQQAIHPELNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTV
Sbjct: 361 FFVTSAPWSVIDQQAIHPELNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTV 420

Query: 421 AHPSQAPSPNQPTKHGDNREHPNEQ 445
           AHPSQAPSPNQPTKHGDNREHPNEQ
Sbjct: 421 AHPSQAPSPNQPTKHGDNREHPNEQ 445


>gi|145580575 C-terminal binding protein 2 isoform 2 [Homo sapiens]
          Length = 985

 Score =  858 bits (2216), Expect = 0.0
 Identities = 425/425 (100%), Positives = 425/425 (100%)

Query: 21  IRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFCDAQSTQEIHEKVLNEAVGAM 80
           IRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFCDAQSTQEIHEKVLNEAVGAM
Sbjct: 561 IRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFCDAQSTQEIHEKVLNEAVGAM 620

Query: 81  MYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTIC 140
           MYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTIC
Sbjct: 621 MYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTIC 680

Query: 141 HILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAK 200
           HILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAK
Sbjct: 681 HILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAK 740

Query: 201 AFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQ 260
           AFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQ
Sbjct: 741 AFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQ 800

Query: 261 MRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTP 320
           MRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTP
Sbjct: 801 MRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTP 860

Query: 321 HTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKEFFVTSAPWSVIDQQAIHPEL 380
           HTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKEFFVTSAPWSVIDQQAIHPEL
Sbjct: 861 HTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKEFFVTSAPWSVIDQQAIHPEL 920

Query: 381 NGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNRE 440
           NGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNRE
Sbjct: 921 NGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNRE 980

Query: 441 HPNEQ 445
           HPNEQ
Sbjct: 981 HPNEQ 985


>gi|61743967 C-terminal binding protein 1 isoform 2 [Homo sapiens]
          Length = 429

 Score =  725 bits (1871), Expect = 0.0
 Identities = 345/426 (80%), Positives = 388/426 (91%)

Query: 20  GIRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFCDAQSTQEIHEKVLNEAVGA 79
           G+RP IMNGPLHPRPLVALLDGRDCTVEMPILKD+ATVAFCDAQSTQEIHEKVLNEAVGA
Sbjct: 3   GVRPPIMNGPLHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGA 62

Query: 80  MMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTI 139
           +MYHTITLTREDLEKFKALR+IVRIGSG+DN+DIK+AG+LGIAVCN+P+A+VEETADST+
Sbjct: 63  LMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTL 122

Query: 140 CHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRA 199
           CHILNLYRR TWL+QALREGTRVQSVEQIREVASGAARIRGETLG+IG GR GQAVA+RA
Sbjct: 123 CHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRA 182

Query: 200 KAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIK 259
           KAFGF+V+FYDPYL DG+ER+LG+QRV TLQDLL+ SDCV+LHC LNEHNHHLINDFT+K
Sbjct: 183 KAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVK 242

Query: 260 QMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICT 319
           QMRQGAFLVN ARGGLVDEKALAQALKEGRIRGAALDVHESEPFSF+QGPLKDAPNLICT
Sbjct: 243 QMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICT 302

Query: 320 PHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKEFFVTSAPWSVIDQQAIHPE 379
           PH AWYSEQAS+EMRE AA EIRRAITGRIP+SL+NCVNK+    +  W+ +D   +HPE
Sbjct: 303 PHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAATHWASMDPAVVHPE 362

Query: 380 LNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNR 439
           LNGA YRYPPG+VGVAP G+PAA+EGI+P  + ++H LP VAHP  APSP Q  K   +R
Sbjct: 363 LNGAAYRYPPGVVGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKPEADR 422

Query: 440 EHPNEQ 445
           +H ++Q
Sbjct: 423 DHASDQ 428


>gi|4557497 C-terminal binding protein 1 isoform 1 [Homo sapiens]
          Length = 440

 Score =  725 bits (1871), Expect = 0.0
 Identities = 345/426 (80%), Positives = 388/426 (91%)

Query: 20  GIRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFCDAQSTQEIHEKVLNEAVGA 79
           G+RP IMNGPLHPRPLVALLDGRDCTVEMPILKD+ATVAFCDAQSTQEIHEKVLNEAVGA
Sbjct: 14  GVRPPIMNGPLHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGA 73

Query: 80  MMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTI 139
           +MYHTITLTREDLEKFKALR+IVRIGSG+DN+DIK+AG+LGIAVCN+P+A+VEETADST+
Sbjct: 74  LMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTL 133

Query: 140 CHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRA 199
           CHILNLYRR TWL+QALREGTRVQSVEQIREVASGAARIRGETLG+IG GR GQAVA+RA
Sbjct: 134 CHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRA 193

Query: 200 KAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIK 259
           KAFGF+V+FYDPYL DG+ER+LG+QRV TLQDLL+ SDCV+LHC LNEHNHHLINDFT+K
Sbjct: 194 KAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVK 253

Query: 260 QMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICT 319
           QMRQGAFLVN ARGGLVDEKALAQALKEGRIRGAALDVHESEPFSF+QGPLKDAPNLICT
Sbjct: 254 QMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICT 313

Query: 320 PHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKEFFVTSAPWSVIDQQAIHPE 379
           PH AWYSEQAS+EMRE AA EIRRAITGRIP+SL+NCVNK+    +  W+ +D   +HPE
Sbjct: 314 PHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAATHWASMDPAVVHPE 373

Query: 380 LNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNR 439
           LNGA YRYPPG+VGVAP G+PAA+EGI+P  + ++H LP VAHP  APSP Q  K   +R
Sbjct: 374 LNGAAYRYPPGVVGVAPTGIPAAVEGIVPSAMSLSHGLPPVAHPPHAPSPGQTVKPEADR 433

Query: 440 EHPNEQ 445
           +H ++Q
Sbjct: 434 DHASDQ 439


>gi|23308577 phosphoglycerate dehydrogenase [Homo sapiens]
          Length = 533

 Score =  138 bits (347), Expect = 1e-32
 Identities = 97/301 (32%), Positives = 153/301 (50%), Gaps = 18/301 (5%)

Query: 73  LNEAVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVE 132
           L +  G ++     +T + +   + L+V+ R G+G DNVD++AA   GI V N P+    
Sbjct: 45  LQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSL 104

Query: 133 ETADSTICHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTG 192
             A+ T   I+ L R+      ++++G      +  R+   G   + G+TLG++G GR G
Sbjct: 105 SAAELTCGMIMCLARQIPQATASMKDG------KWERKKFMGT-ELNGKTLGILGLGRIG 157

Query: 193 QAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHL 252
           + VA R ++FG   I YDP +   +  S GVQ++  L+++    D +++H  L      L
Sbjct: 158 REVATRMQSFGMKTIGYDPIISPEVSASFGVQQL-PLEEIWPLCDFITVHTPLLPSTTGL 216

Query: 253 INDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKD 312
           +ND T  Q ++G  +VN ARGG+VDE AL +AL+ G+  GAALDV   EP       L D
Sbjct: 217 LNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP--PRDRALVD 274

Query: 313 APNLICTPHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKE-----FFVTSAP 367
             N+I  PH    +++A     E  A +    + G+   SL   VN +     F   + P
Sbjct: 275 HENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGK---SLTGVVNAQALTSAFSPHTKP 331

Query: 368 W 368
           W
Sbjct: 332 W 332


>gi|6912396 glyoxylate reductase/hydroxypyruvate reductase [Homo
           sapiens]
          Length = 328

 Score = 85.9 bits (211), Expect = 7e-17
 Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 6/258 (2%)

Query: 98  LRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTICHILNLYRRNTWLYQALR 157
           L+VI  +  G D++ +    + GI V   P    + TA+  +  +L   RR     + ++
Sbjct: 75  LKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVK 134

Query: 158 EGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDGI 217
            G    S + +     G  +    T+G+IG GR GQA+A R K FG     Y        
Sbjct: 135 NGGWT-SWKPLWLCGYGLTQ---STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPE 190

Query: 218 ERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVD 277
           E +       +  +L  QSD + + C+L      L N    ++M++ A  +N +RG +V+
Sbjct: 191 EAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVN 250

Query: 278 EKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTAWYSEQASLEMREAA 337
           +  L QAL  G+I  A LDV   EP      PL    N +  PH    + +    M   A
Sbjct: 251 QDDLYQALASGKIAAAGLDVTSPEPLP-TNHPLLTLKNCVILPHIGSATHRTRNTMSLLA 309

Query: 338 ATEIRRAITGR-IPESLR 354
           A  +   + G  +P  L+
Sbjct: 310 ANNLLAGLRGEPMPSELK 327


>gi|23957680 ral guanine nucleotide dissociation stimulator-like 4
           [Homo sapiens]
          Length = 473

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 375 AIHPELNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTK 434
           A+ PE   A    PPG +  APG  PA  EG  PG +    + P  + P +    NQP++
Sbjct: 153 ALEPESPAALG--PPGYLHSAPGPAPAPGEGPPPGTVLEPQSAPESSCPCRGSVKNQPSE 210


>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 389

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 362 FVTSAPWSVID------QQAIHPELNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTH 415
           F +SAPW  +         A  P    A  R PP  V   P       E + PG +P   
Sbjct: 90  FWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEGE 149

Query: 416 NLPTVAHPSQAPSPNQPTKHGD 437
             P    P ++P+P +P + GD
Sbjct: 150 PRPYALPPRESPAP-RPFRWGD 170


>gi|238624188 diffuse panbronchiolitis critical region 1 protein
           [Homo sapiens]
          Length = 1393

 Score = 32.3 bits (72), Expect = 0.89
 Identities = 16/46 (34%), Positives = 21/46 (45%)

Query: 400 PAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNREHPNEQ 445
           P A E   P     T N    A+    PSP +PT++GD     NE+
Sbjct: 527 PLANENTTPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEK 572



 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/44 (36%), Positives = 21/44 (47%)

Query: 402 AMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNREHPNEQ 445
           A E   P     T N    A+ +  PSP QPT++GD     NE+
Sbjct: 729 ANEKTTPFPAEPTENRERTANENTTPSPAQPTENGDRTPLANEK 772



 Score = 28.9 bits (63), Expect = 9.9
 Identities = 14/48 (29%), Positives = 22/48 (45%)

Query: 398 GLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNREHPNEQ 445
           G   A E   P     T +    A+ +  PSP +PT+HG+     N++
Sbjct: 365 GERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEHGERTPFANDK 412



 Score = 28.9 bits (63), Expect = 9.9
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query: 400  PAAMEGIIPGGIPVTHN--LPTVAHPSQAPSPNQPTKHGDNREHPNEQ 445
            P+A E  IP     T +  +   A+ +  PSP +PT+HG+     NE+
Sbjct: 1028 PSANEKTIPSPAKPTEHEEMTPSANENTTPSPVKPTEHGEKTTLANEK 1075


>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis
           critical region 1 [Homo sapiens]
          Length = 1400

 Score = 32.3 bits (72), Expect = 0.89
 Identities = 16/46 (34%), Positives = 21/46 (45%)

Query: 400 PAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNREHPNEQ 445
           P A E   P     T N    A+    PSP +PT++GD     NE+
Sbjct: 589 PLANENTTPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEK 634



 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/44 (36%), Positives = 21/44 (47%)

Query: 402 AMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNREHPNEQ 445
           A E   P     T N    A+ +  PSP QPT++GD     NE+
Sbjct: 791 ANEKTTPFPAEPTENRERTANENTTPSPAQPTENGDRTPLANEK 834



 Score = 28.9 bits (63), Expect = 9.9
 Identities = 14/48 (29%), Positives = 22/48 (45%)

Query: 398 GLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNREHPNEQ 445
           G   A E   P     T +    A+ +  PSP +PT+HG+     N++
Sbjct: 427 GERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEHGERTPFANDK 474


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 16/73 (21%)

Query: 387  YPPGIVGVAPGGLPAAMEGIIP---------------GGIPVTHNLPTVAHPSQAPSPNQ 431
            + PG  G  P   PA+ +G  P               G +P  H+ P   H   AP P Q
Sbjct: 954  FNPGSGGPLPASSPASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPP-Q 1012

Query: 432  PTKHGDNREHPNE 444
            P  H  +  HP E
Sbjct: 1013 PHHHHAHPPHPPE 1025


>gi|198041703 solute carrier family 22 (organic cation transporter),
           member 18 antisense [Homo sapiens]
          Length = 253

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 125 NIPSAAVEETADSTICHI-LNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETL 183
           N P   V++ A  T+  +   L R+  WL+ +     + Q + + RE      R+RG  L
Sbjct: 13  NCPLGWVKKKASGTLAPLDFLLQRKRLWLWASEPVRPQPQGIHRFREARRQFCRMRGSRL 72

Query: 184 --GLIGFGRTG 192
             G  GFG +G
Sbjct: 73  TGGRKGFGSSG 83


>gi|195972857 Rho/Rac guanine nucleotide exchange factor 18 isoform
           b [Homo sapiens]
          Length = 1173

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 210 DPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVN 269
           DP L   +E  L VQR+ TL  LL     V  H      + ++       Q R+  F + 
Sbjct: 789 DPRLPTVLESEL-VQRIQTLSQLLLNLQAVIAH-----QDSYVETQRAAIQEREKQFRLQ 842

Query: 270 AARGGLVDEKALAQALKEGRIRGAALDVHESE 301
           + RG L+ E+   +  ++ R   AAL+  +S+
Sbjct: 843 STRGNLLLEQERQRNFEKQREERAALEKLQSQ 874


>gi|41327769 Rho/Rac guanine nucleotide exchange factor 18 isoform a
           [Homo sapiens]
          Length = 1015

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 210 DPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVN 269
           DP L   +E  L VQR+ TL  LL     V  H      + ++       Q R+  F + 
Sbjct: 631 DPRLPTVLESEL-VQRIQTLSQLLLNLQAVIAH-----QDSYVETQRAAIQEREKQFRLQ 684

Query: 270 AARGGLVDEKALAQALKEGRIRGAALDVHESE 301
           + RG L+ E+   +  ++ R   AAL+  +S+
Sbjct: 685 STRGNLLLEQERQRNFEKQREERAALEKLQSQ 716


>gi|4759156 small nuclear ribonucleoprotein polypeptide A [Homo
           sapiens]
          Length = 282

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 10/51 (19%)

Query: 385 YRYPPGIV---GVAPGGLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQP 432
           Y  PPG++   G+APG +P       PG +P    +P    P+Q  S N P
Sbjct: 163 YMPPPGMIPPPGLAPGQIP-------PGAMPPQQLMPGQMPPAQPLSENPP 206


>gi|46049063 exportin 6 [Homo sapiens]
          Length = 1125

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 8/50 (16%)

Query: 204 FSVIFYDPYLQDGIERSLGVQRVYTLQ------DLLYQSDCVSLHCNLNE 247
           FS +F  P LQD +E  LG+Q+           ++  ++DC  LHC+L +
Sbjct: 509 FSTLF--PVLQDNLEVYLGLQQFIVTSGSGHRLNITAENDCRRLHCSLRD 556


>gi|157502173 hypothetical protein LOC348487 [Homo sapiens]
          Length = 280

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 19/96 (19%)

Query: 349 IPESLRNC-----VNKEFFVTSAP---WSVIDQQAIHPELNGATYRYPPGIVGVAPGGLP 400
           +P+ LR       V ++F +T A    WS +D++ +HPE        P GIV +      
Sbjct: 139 LPDELREARFAAGVAEQFAITEATLSAWSSLDEEELHPE------NSPQGIVQLQDLE-S 191

Query: 401 AAMEGIIPGGIPVTHNLPTVAHPS----QAPSPNQP 432
             ++  +P G     +L   + PS      PSP +P
Sbjct: 192 IYLQDSLPSGPSQDDSLQAFSSPSPSPDSCPSPEEP 227


>gi|50345831 forkhead box J3 [Homo sapiens]
          Length = 622

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 9/82 (10%)

Query: 364 TSAPWSVIDQQAIHPELNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTVAHP 423
           T+   SV      HP+++     +PP      P GLP       P   P     P     
Sbjct: 359 TTGSNSVAQVSLSHPQMHTQPSPHPPH----RPHGLPQH-----PQRSPHPAPHPQQHSQ 409

Query: 424 SQAPSPNQPTKHGDNREHPNEQ 445
            Q+P P  P+ H   + HPN Q
Sbjct: 410 LQSPHPQHPSPHQHIQHHPNHQ 431


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 13/53 (24%), Positives = 24/53 (45%)

Query: 393   GVAPGGLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNREHPNEQ 445
             GV    +P ++ G++   +  +    + A P+  PSP +P     +  HP  Q
Sbjct: 11617 GVPTTTIPPSIPGVVTSQVTSSATDTSTAIPTLTPSPGEPETTASSATHPGTQ 11669


>gi|239741018 PREDICTED: hypothetical protein XP_002342056 [Homo
           sapiens]
          Length = 566

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 17/100 (17%)

Query: 248 HNHHLINDFTIKQ---MRQGAFLVNAARGGLVDEKALAQA----LKEGRIRGAALDVHES 300
           H H L+ D  + Q      G  L  A       E A A+     LK+G + GAA D+   
Sbjct: 307 HWHLLLADILMAQGSYEEAGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAARDLQ-- 364

Query: 301 EPFSFAQGPLKDAPNLICTPHTAWYSEQASLEMREAAATE 340
              S A+    DAP+L C  H    SE+ SL   +AAA E
Sbjct: 365 ---SLAE---VDAPDLSCLLHLLEASERQSL--AQAAAQE 396


>gi|19923597 Sin3A-associated protein, 130kDa isoform b [Homo
           sapiens]
          Length = 1048

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 3/56 (5%)

Query: 375 AIHPELNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPN 430
           A+ P         P  I   +P   PA     IPG +P+T  + T+A    AP P+
Sbjct: 712 AVPPTAQQPPPTIPTMIAAASPPSQPAVALSTIPGAVPITPPITTIA---AAPPPS 764


>gi|225579127 Sin3A-associated protein, 130kDa isoform a [Homo
           sapiens]
          Length = 1083

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 3/56 (5%)

Query: 375 AIHPELNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPN 430
           A+ P         P  I   +P   PA     IPG +P+T  + T+A    AP P+
Sbjct: 747 AVPPTAQQPPPTIPTMIAAASPPSQPAVALSTIPGAVPITPPITTIA---AAPPPS 799


>gi|116292174 fidgetin-like 2 [Homo sapiens]
          Length = 653

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 385 YRYPPGIVGVAPG--GLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHG 436
           Y YP G     PG   LP       PG  P  +  P +  P+  P+P  PT +G
Sbjct: 203 YNYPAGGYAAQPGYGALPPP-----PGPPPAPYLTPGLPAPTPLPAPAPPTAYG 251


>gi|64084766 fidgetin [Homo sapiens]
          Length = 759

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 387 YPPGIV---GVAPGGLPAAMEGIIPGGIPVTHNLPTVAHP 423
           YPP      G +PGG P      +P GIP    LP    P
Sbjct: 252 YPPQTAVGSGYSPGGAPPPPSAYLPSGIPAPTPLPPTTVP 291


>gi|31543535 R3H domain containing 1 [Homo sapiens]
          Length = 1099

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%)

Query: 388 PPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTVAHP--SQAPSPNQP 432
           PPG + + P         I P G PV +N P    P  SQ P P QP
Sbjct: 481 PPGSILINP---QTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQP 524


>gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo
           sapiens]
          Length = 1424

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 10/74 (13%)

Query: 378 PELNGATYRYPPGIVGVA--PG-----GLPAAM-EGIIPG--GIPVTHNLPTVAHPSQAP 427
           P + G  +  PPG  G    PG     G P  M E  +PG  G+P     P VA P    
Sbjct: 694 PGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPG 753

Query: 428 SPNQPTKHGDNREH 441
           +P  P + G++ EH
Sbjct: 754 TPGFPGERGNSGEH 767


>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
           sapiens]
          Length = 1494

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 10/74 (13%)

Query: 378 PELNGATYRYPPGIVGVA--PG-----GLPAAM-EGIIPG--GIPVTHNLPTVAHPSQAP 427
           P + G  +  PPG  G    PG     G P  M E  +PG  G+P     P VA P    
Sbjct: 694 PGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPG 753

Query: 428 SPNQPTKHGDNREH 441
           +P  P + G++ EH
Sbjct: 754 TPGFPGERGNSGEH 767


>gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo
           sapiens]
          Length = 1637

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 10/74 (13%)

Query: 378 PELNGATYRYPPGIVGVA--PG-----GLPAAM-EGIIPG--GIPVTHNLPTVAHPSQAP 427
           P + G  +  PPG  G    PG     G P  M E  +PG  G+P     P VA P    
Sbjct: 694 PGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPG 753

Query: 428 SPNQPTKHGDNREH 441
           +P  P + G++ EH
Sbjct: 754 TPGFPGERGNSGEH 767


>gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo
           sapiens]
          Length = 1670

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 10/74 (13%)

Query: 378 PELNGATYRYPPGIVGVA--PG-----GLPAAM-EGIIPG--GIPVTHNLPTVAHPSQAP 427
           P + G  +  PPG  G    PG     G P  M E  +PG  G+P     P VA P    
Sbjct: 694 PGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPG 753

Query: 428 SPNQPTKHGDNREH 441
           +P  P + G++ EH
Sbjct: 754 TPGFPGERGNSGEH 767


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,121,987
Number of Sequences: 37866
Number of extensions: 805984
Number of successful extensions: 2466
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 2393
Number of HSP's gapped (non-prelim): 86
length of query: 445
length of database: 18,247,518
effective HSP length: 105
effective length of query: 340
effective length of database: 14,271,588
effective search space: 4852339920
effective search space used: 4852339920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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