Guide to the Human Genome
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Name: NUCB2 Sequence: fasta or formatted (420aa) NCBI GI: 4826870
Description:

nucleobindin 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         14           2
 C cysteine            0.5          2           1
 D aspartate           8.3         35           2
 E glutamate          15.2         64           3
 F phenylalanine       3.8         16           2
 G glycine             2.4         10           1
 H histidine           4.3         18           2
 I isoleucine          4.0         17           2
 K lysine             11.7         49           3
 L leucine            12.1         51           2
 M methionine          2.9         12           2
 N asparagine          3.1         13           1
 P proline             3.6         15           2
 Q glutamine           6.2         26           3
 R arginine            4.0         17           2
 S serine              2.9         12           1
 T threonine           4.5         19           1
 V valine              4.0         17           1
 W tryptophan          0.7          3           1
 Y tyrosine            2.4         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleobindin 2 
NUCB1                 0.568   nucleobindin 1 
LOC645202             0.062   PREDICTED: hypothetical protein LOC645202 
LOC400352             0.056   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.056   PREDICTED: similar to Putative golgin subfamily A m...
LOC440243             0.056   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC727832             0.055   golgi autoantigen, golgin subfamily a-like 
LOC283767             0.052   golgi autoantigen, golgin subfamily a-like 
LOC283685             0.052   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC100133758          0.051   PREDICTED: hypothetical protein, partial 
LOC283685             0.050   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TCHH                  0.042   trichohyalin 
CCDC88A               0.042   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.042   coiled-coil domain containing 88A isoform 1 
AKAP9                 0.040   A-kinase anchor protein 9 isoform 2 
CENPE                 0.040   centromere protein E 
KIF15                 0.039   kinesin family member 15 
LOC651807             0.038   PREDICTED: hypothetical protein 
CLIP1                 0.038   restin isoform b 
CLIP1                 0.038   restin isoform a 
INCENP                0.036   inner centromere protein antigens 135/155kDa isofor...
WDR87                 0.036   NYD-SP11 protein 
MNS1                  0.036   meiosis-specific nuclear structural 1 
INCENP                0.036   inner centromere protein antigens 135/155kDa isofor...
GOLGA6C               0.036   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
GOLGA6D               0.035   golgi autoantigen, golgin subfamily a, 6D 
GOLGA4                0.035   golgi autoantigen, golgin subfamily a, 4 
CNTLN                 0.035   centlein isoform 1 
SYCP1                 0.034   synaptonemal complex protein 1 
GOLGA6B               0.034   golgi autoantigen, golgin subfamily a, 6B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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