Guide to the Human Genome
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Name: C12orf10 Sequence: fasta or formatted (376aa) NCBI GI: 145275185
Description:

MYG1 protein

Referenced in:

Additional Conserved Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         29           1
 C cysteine            1.6          6           1
 D aspartate           5.1         19           1
 E glutamate           7.2         27           2
 F phenylalanine       3.7         14           2
 G glycine             6.9         26           2
 H histidine           4.5         17           2
 I isoleucine          3.5         13           1
 K lysine              2.9         11           1
 L leucine            11.7         44           3
 M methionine          2.1          8           1
 N asparagine          1.3          5           1
 P proline             8.0         30           4
 Q glutamine           4.8         18           1
 R arginine            7.4         28           2
 S serine              6.6         25           2
 T threonine           4.8         18           3
 V valine              5.1         19           2
 W tryptophan          1.9          7           1
 Y tyrosine            3.2         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MYG1 protein 
KSR2                  0.011   kinase suppressor of ras 2 
USP20                 0.009   ubiquitin specific protease 20 
USP20                 0.009   ubiquitin specific protease 20 
USP20                 0.009   ubiquitin specific protease 20 
RASSF5                0.009   Ras association (RalGDS/AF-6) domain family 5 isofor...
RASSF5                0.009   Ras association (RalGDS/AF-6) domain family 5 isofor...
PATL1                 0.008   protein associated with topoisomerase II homolog 1 ...
USP33                 0.007   ubiquitin specific protease 33 isoform 3 
USP33                 0.007   ubiquitin specific protease 33 isoform 1 
USP33                 0.007   ubiquitin specific protease 33 isoform 2 
CSF3R                 0.007   colony stimulating factor 3 receptor isoform d precu...
CSF3R                 0.007   colony stimulating factor 3 receptor isoform c precu...
CSF3R                 0.007   colony stimulating factor 3 receptor isoform b precu...
CSF3R                 0.007   colony stimulating factor 3 receptor isoform a precur...
TPP2                  0.007   tripeptidyl peptidase II 
LOC100288305          0.007   PREDICTED: hypothetical protein XP_002343813 
DFFA                  0.007   DNA fragmentation factor, 45kDa, alpha polypeptide i...
ABHD13                0.005   abhydrolase domain containing 13 
PAM                   0.005   peptidylglycine alpha-amidating monooxygenase isofor...
PAM                   0.005   peptidylglycine alpha-amidating monooxygenase isofor...
PAM                   0.005   peptidylglycine alpha-amidating monooxygenase isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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