Guide to the Human Genome
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Name: TPP2 Sequence: fasta or formatted (1249aa) NCBI GI: 186972143
Description:

tripeptidyl peptidase II

Referenced in:

Peptide-processing Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         94           2
 C cysteine            2.1         26           1
 D aspartate           5.5         69           2
 E glutamate           6.7         84           3
 F phenylalanine       3.0         37           2
 G glycine             7.0         88           2
 H histidine           3.0         37           1
 I isoleucine          5.8         72           2
 K lysine              6.6         83           3
 L leucine             9.0        112           2
 M methionine          1.5         19           2
 N asparagine          5.0         62           2
 P proline             5.4         68           3
 Q glutamine           3.1         39           1
 R arginine            3.7         46           2
 S serine              7.3         91           2
 T threonine           5.9         74           2
 V valine              6.5         81           1
 W tryptophan          1.6         20           2
 Y tyrosine            3.8         47           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tripeptidyl peptidase II 
MBTPS1                0.017   membrane-bound transcription factor site-1 protease p...
MUC16                 0.003   mucin 16 
GOLGA2                0.003   Golgi autoantigen, golgin subfamily a, 2 
SMC1B                 0.003   SMC1 structural maintenance of chromosomes 1-like 2 ...
NBPF10                0.003   hypothetical protein LOC100132406 
HECTD1                0.003   HECT domain containing 1 
PTPRR                 0.003   protein tyrosine phosphatase, receptor type, R isofor...
PTPRR                 0.003   protein tyrosine phosphatase, receptor type, R isofo...
NBPF20                0.003   hypothetical protein LOC400818 
CNTN1                 0.003   contactin 1 isoform 1 precursor 
CNTN1                 0.003   contactin 1 isoform 2 precursor 
NBPF1                 0.003   hypothetical protein LOC55672 
HCFC1                 0.002   host cell factor 1 
TOP1                  0.002   DNA topoisomerase I 
PCSK9                 0.002   proprotein convertase subtilisin/kexin type 9 prepro...
GLTSCR1               0.002   glioma tumor suppressor candidate region gene 1 [Ho...
FILIP1                0.002   filamin A interacting protein 1 
HSPB11                0.002   heat shock protein family B (small), member 11 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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