Guide to the Human Genome
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Name: ABHD13 Sequence: fasta or formatted (337aa) NCBI GI: 49355781
Description:

abhydrolase domain containing 13

Referenced in:

Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         16           1
 C cysteine            1.2          4           1
 D aspartate           3.3         11           1
 E glutamate           4.7         16           2
 F phenylalanine       5.3         18           2
 G glycine             5.6         19           2
 H histidine           2.7          9           1
 I isoleucine          8.9         30           2
 K lysine              4.5         15           1
 L leucine            13.6         46           4
 M methionine          3.6         12           2
 N asparagine          4.2         14           1
 P proline             5.6         19           2
 Q glutamine           2.4          8           1
 R arginine            4.7         16           1
 S serine              9.2         31           3
 T threonine           4.5         15           1
 V valine              4.5         15           2
 W tryptophan          2.1          7           1
 Y tyrosine            4.7         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   abhydrolase domain containing 13 
FAM108C1              0.086   hypothetical protein LOC58489 
FAM108A4              0.083   PREDICTED: hypothetical protein 
FAM108A1              0.082   hypothetical protein LOC81926 isoform 2 
FAM108A1              0.082   hypothetical protein LOC81926 isoform 1 
FAM108B1              0.076   family with sequence similarity 108, member B1 isofo...
FAM108A5              0.074   PREDICTED: family with sequence similarity 108, mem...
FAM108A5              0.074   PREDICTED: family with sequence similarity 108, mem...
FAM108A5              0.074   PREDICTED: hypothetical protein LOC729495 
LOC100289252          0.073   PREDICTED: hypothetical protein XP_002342156 
FAM108B1              0.073   family with sequence similarity 108, member B1 isofo...
ABHD12                0.071   abhydrolase domain containing 12 isoform a 
ABHD12                0.071   abhydrolase domain containing 12 isoform b 
ABHD12B               0.067   abhydrolase domain containing 12B isoform c 
ABHD12B               0.067   abhydrolase domain containing 12B isoform b 
MGLL                  0.038   monoglyceride lipase isoform 2 
MGLL                  0.038   monoglyceride lipase isoform 1 
LYPLAL1               0.014   lysophospholipase-like 1 
PPME1                 0.012   protein phosphatase methylesterase 1 
AADACL2               0.012   arylacetamide deacetylase-like 2 
ABHD10                0.011   abhydrolase domain containing 10 
ABHD11                0.008   abhydrolase domain containing 11 isoform 8 
C12orf10              0.006   MYG1 protein 
ABHD11                0.006   abhydrolase domain containing 11 isoform 1 
ABHD11                0.006   abhydrolase domain containing 11 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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