Guide to the Human Genome
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Name: PAM Sequence: fasta or formatted (905aa) NCBI GI: 21070974
Description:

peptidylglycine alpha-amidating monooxygenase isoform b preproprotein

Referenced in:

Additional Protein Modifications

Other entries for this name:
alt prot [866aa] peptidylglycine alpha-amidating monooxygenase isoform c prepropro...
alt prot [887aa] peptidylglycine alpha-amidating monooxygenase isoform d prepropro...
alt prot [974aa] peptidylglycine alpha-amidating monooxygenase isoform a prepropro...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         45           2
 C cysteine            1.7         15           1
 D aspartate           6.2         56           2
 E glutamate           6.4         58           4
 F phenylalanine       5.3         48           2
 G glycine             8.3         75           2
 H histidine           3.9         35           2
 I isoleucine          4.4         40           2
 K lysine              5.1         46           2
 L leucine             7.6         69           2
 M methionine          2.5         23           2
 N asparagine          3.8         34           2
 P proline             6.6         60           3
 Q glutamine           3.4         31           2
 R arginine            5.0         45           1
 S serine              8.1         73           3
 T threonine           4.8         43           2
 V valine              8.1         73           2
 W tryptophan          1.0          9           1
 Y tyrosine            3.0         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peptidylglycine alpha-amidating monooxygenase isofor... 
PAM                   0.975   peptidylglycine alpha-amidating monooxygenase isofor...
PAM                   0.921   peptidylglycine alpha-amidating monooxygenase isofor...
PAM                   0.425   peptidylglycine alpha-amidating monooxygenase isofor...
DBH                   0.037   dopamine beta hydroxylase precursor 
MOXD1                 0.028   monooxygenase, DBH-like 1 isoform 2 
NHLRC3                0.018   NHL repeat containing 3 isoform a 
TRIM3                 0.018   tripartite motif-containing 3 
TRIM3                 0.018   tripartite motif-containing 3 
TRIM71                0.016   tripartite motif-containing 71 
TRIM2                 0.015   tripartite motif-containing 2 isoform 2 
TRIM2                 0.015   tripartite motif-containing 2 isoform 1 
TRIM32                0.010   tripartite motif-containing 32 
TRIM32                0.010   tripartite motif-containing 32 
NHLRC3                0.008   NHL repeat containing 3 isoform b 
NHLRC1                0.007   NHL repeat containing 1 
HNRNPU                0.004   heterogeneous nuclear ribonucleoprotein U isoform b ...
HNRNPU                0.004   heterogeneous nuclear ribonucleoprotein U isoform a ...
MIPOL1                0.004   mirror-image polydactyly 1 
AEBP2                 0.004   AE binding protein 2 isoform b 
AEBP2                 0.004   AE binding protein 2 isoform a 
ILF3                  0.004   interleukin enhancer binding factor 3 isoform d [Ho...
ILF3                  0.004   interleukin enhancer binding factor 3 isoform a [Hom...
ODZ4                  0.004   odz, odd Oz/ten-m homolog 4 
PPP2R1B               0.004   beta isoform of regulatory subunit A, protein phosph...
ILF3                  0.003   interleukin enhancer binding factor 3 isoform e [Ho...
ILF3                  0.003   interleukin enhancer binding factor 3 isoform c [Hom...
ILF3                  0.003   interleukin enhancer binding factor 3 isoform b [Hom...
TRDN                  0.003   triadin 
INPP5D                0.003   SH2 containing inositol phosphatase isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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