Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 109637776
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109637776 ubiquitin carboxyl-terminal hydrolase CYLD isoform
2 [Homo sapiens]
(953 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109637774 ubiquitin carboxyl-terminal hydrolase CYLD isoform ... 1950 0.0
gi|109637776 ubiquitin carboxyl-terminal hydrolase CYLD isoform ... 1950 0.0
gi|14165258 ubiquitin carboxyl-terminal hydrolase CYLD isoform 1... 1945 0.0
gi|116008447 CAP-GLY domain containing linker protein 2 isoform ... 47 8e-05
gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2... 47 8e-05
gi|18496983 CAP-GLY domain containing linker protein 3 [Homo sap... 43 0.001
gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens] 40 0.008
gi|239752529 PREDICTED: similar to mucin [Homo sapiens] 40 0.008
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 40 0.014
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 40 0.014
gi|239742276 PREDICTED: hypothetical protein XP_002342471 [Homo ... 38 0.039
gi|38044112 restin isoform b [Homo sapiens] 38 0.039
gi|4506751 restin isoform a [Homo sapiens] 38 0.039
gi|171184451 centrosome-associated protein 350 [Homo sapiens] 37 0.088
gi|45935385 SAM and SH3 domain containing 1 [Homo sapiens] 36 0.15
gi|194294554 SET binding protein 1 isoform a [Homo sapiens] 36 0.20
gi|50428925 cytoskeleton associated protein 1 [Homo sapiens] 36 0.20
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 35 0.44
gi|83367077 mucin 16 [Homo sapiens] 33 0.97
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 33 0.97
gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 33 1.3
gi|169172880 PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... 33 1.3
gi|109689723 abl interactor 2 [Homo sapiens] 33 1.3
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 33 1.7
gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens] 33 1.7
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 33 1.7
gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens] 33 1.7
gi|153792150 deubiquitinating enzyme 3 [Homo sapiens] 33 1.7
gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [H... 32 2.2
gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H... 32 2.2
>gi|109637774 ubiquitin carboxyl-terminal hydrolase CYLD isoform 2
[Homo sapiens]
Length = 953
Score = 1950 bits (5052), Expect = 0.0
Identities = 953/953 (100%), Positives = 953/953 (100%)
Query: 1 MSSGLWSQEKVTSPYWEERIFYLLLQECSVTDKQTQKLLKVPKGSIGQYIQDRSVGHSRI 60
MSSGLWSQEKVTSPYWEERIFYLLLQECSVTDKQTQKLLKVPKGSIGQYIQDRSVGHSRI
Sbjct: 1 MSSGLWSQEKVTSPYWEERIFYLLLQECSVTDKQTQKLLKVPKGSIGQYIQDRSVGHSRI 60
Query: 61 PSAKGKKNQIGLKILEQPHAVLFVDEKDVVEINEKFTELLLAITNCEERFSLFKNRNRLS 120
PSAKGKKNQIGLKILEQPHAVLFVDEKDVVEINEKFTELLLAITNCEERFSLFKNRNRLS
Sbjct: 61 PSAKGKKNQIGLKILEQPHAVLFVDEKDVVEINEKFTELLLAITNCEERFSLFKNRNRLS 120
Query: 121 KGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGV 180
KGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGV
Sbjct: 121 KGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGV 180
Query: 181 YQGKQLFQCDEDCGVFVALDKLELIEDDDTALESDYAGPGDTMQVELPPLEINSRVSLKV 240
YQGKQLFQCDEDCGVFVALDKLELIEDDDTALESDYAGPGDTMQVELPPLEINSRVSLKV
Sbjct: 181 YQGKQLFQCDEDCGVFVALDKLELIEDDDTALESDYAGPGDTMQVELPPLEINSRVSLKV 240
Query: 241 GETIESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFDGVQLCSFACVESTILLHIN 300
GETIESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFDGVQLCSFACVESTILLHIN
Sbjct: 241 GETIESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFDGVQLCSFACVESTILLHIN 300
Query: 301 DIIPESVTQERRPPKLAFMSRGVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNGSSV 360
DIIPESVTQERRPPKLAFMSRGVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNGSSV
Sbjct: 301 DIIPESVTQERRPPKLAFMSRGVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNGSSV 360
Query: 361 DSQPQSKSKNTWYIDEVAEDPAKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLPFSL 420
DSQPQSKSKNTWYIDEVAEDPAKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLPFSL
Sbjct: 361 DSQPQSKSKNTWYIDEVAEDPAKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLPFSL 420
Query: 421 TKMPNTNGSIGHSPLSLSAQSVMEELNTAPVQESPPLAMPPGNSHGLEVGSLAEVKENPP 480
TKMPNTNGSIGHSPLSLSAQSVMEELNTAPVQESPPLAMPPGNSHGLEVGSLAEVKENPP
Sbjct: 421 TKMPNTNGSIGHSPLSLSAQSVMEELNTAPVQESPPLAMPPGNSHGLEVGSLAEVKENPP 480
Query: 481 FYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCRPDS 540
FYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCRPDS
Sbjct: 481 FYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCRPDS 540
Query: 541 RFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYL 600
RFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYL
Sbjct: 541 RFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYL 600
Query: 601 DSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLR 660
DSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLR
Sbjct: 601 DSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLR 660
Query: 661 KILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMEKNE 720
KILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMEKNE
Sbjct: 661 KILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMEKNE 720
Query: 721 KVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDLLED 780
KVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDLLED
Sbjct: 721 KVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDLLED 780
Query: 781 TPRQCRICGGLAMYECRECYDDPDISAGKIKQFCKTCNTQVHLHPKRLNHKYNPVSLPKD 840
TPRQCRICGGLAMYECRECYDDPDISAGKIKQFCKTCNTQVHLHPKRLNHKYNPVSLPKD
Sbjct: 781 TPRQCRICGGLAMYECRECYDDPDISAGKIKQFCKTCNTQVHLHPKRLNHKYNPVSLPKD 840
Query: 841 LPDWDWRHGCIPCQNMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNI 900
LPDWDWRHGCIPCQNMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNI
Sbjct: 841 LPDWDWRHGCIPCQNMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNI 900
Query: 901 PQVTPCPEVGEYLKMSLEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK 953
PQVTPCPEVGEYLKMSLEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK
Sbjct: 901 PQVTPCPEVGEYLKMSLEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK 953
>gi|109637776 ubiquitin carboxyl-terminal hydrolase CYLD isoform 2
[Homo sapiens]
Length = 953
Score = 1950 bits (5052), Expect = 0.0
Identities = 953/953 (100%), Positives = 953/953 (100%)
Query: 1 MSSGLWSQEKVTSPYWEERIFYLLLQECSVTDKQTQKLLKVPKGSIGQYIQDRSVGHSRI 60
MSSGLWSQEKVTSPYWEERIFYLLLQECSVTDKQTQKLLKVPKGSIGQYIQDRSVGHSRI
Sbjct: 1 MSSGLWSQEKVTSPYWEERIFYLLLQECSVTDKQTQKLLKVPKGSIGQYIQDRSVGHSRI 60
Query: 61 PSAKGKKNQIGLKILEQPHAVLFVDEKDVVEINEKFTELLLAITNCEERFSLFKNRNRLS 120
PSAKGKKNQIGLKILEQPHAVLFVDEKDVVEINEKFTELLLAITNCEERFSLFKNRNRLS
Sbjct: 61 PSAKGKKNQIGLKILEQPHAVLFVDEKDVVEINEKFTELLLAITNCEERFSLFKNRNRLS 120
Query: 121 KGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGV 180
KGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGV
Sbjct: 121 KGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGV 180
Query: 181 YQGKQLFQCDEDCGVFVALDKLELIEDDDTALESDYAGPGDTMQVELPPLEINSRVSLKV 240
YQGKQLFQCDEDCGVFVALDKLELIEDDDTALESDYAGPGDTMQVELPPLEINSRVSLKV
Sbjct: 181 YQGKQLFQCDEDCGVFVALDKLELIEDDDTALESDYAGPGDTMQVELPPLEINSRVSLKV 240
Query: 241 GETIESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFDGVQLCSFACVESTILLHIN 300
GETIESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFDGVQLCSFACVESTILLHIN
Sbjct: 241 GETIESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFDGVQLCSFACVESTILLHIN 300
Query: 301 DIIPESVTQERRPPKLAFMSRGVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNGSSV 360
DIIPESVTQERRPPKLAFMSRGVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNGSSV
Sbjct: 301 DIIPESVTQERRPPKLAFMSRGVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNGSSV 360
Query: 361 DSQPQSKSKNTWYIDEVAEDPAKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLPFSL 420
DSQPQSKSKNTWYIDEVAEDPAKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLPFSL
Sbjct: 361 DSQPQSKSKNTWYIDEVAEDPAKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLPFSL 420
Query: 421 TKMPNTNGSIGHSPLSLSAQSVMEELNTAPVQESPPLAMPPGNSHGLEVGSLAEVKENPP 480
TKMPNTNGSIGHSPLSLSAQSVMEELNTAPVQESPPLAMPPGNSHGLEVGSLAEVKENPP
Sbjct: 421 TKMPNTNGSIGHSPLSLSAQSVMEELNTAPVQESPPLAMPPGNSHGLEVGSLAEVKENPP 480
Query: 481 FYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCRPDS 540
FYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCRPDS
Sbjct: 481 FYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCRPDS 540
Query: 541 RFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYL 600
RFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYL
Sbjct: 541 RFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYL 600
Query: 601 DSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLR 660
DSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLR
Sbjct: 601 DSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLR 660
Query: 661 KILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMEKNE 720
KILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMEKNE
Sbjct: 661 KILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMEKNE 720
Query: 721 KVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDLLED 780
KVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDLLED
Sbjct: 721 KVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDLLED 780
Query: 781 TPRQCRICGGLAMYECRECYDDPDISAGKIKQFCKTCNTQVHLHPKRLNHKYNPVSLPKD 840
TPRQCRICGGLAMYECRECYDDPDISAGKIKQFCKTCNTQVHLHPKRLNHKYNPVSLPKD
Sbjct: 781 TPRQCRICGGLAMYECRECYDDPDISAGKIKQFCKTCNTQVHLHPKRLNHKYNPVSLPKD 840
Query: 841 LPDWDWRHGCIPCQNMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNI 900
LPDWDWRHGCIPCQNMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNI
Sbjct: 841 LPDWDWRHGCIPCQNMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNI 900
Query: 901 PQVTPCPEVGEYLKMSLEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK 953
PQVTPCPEVGEYLKMSLEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK
Sbjct: 901 PQVTPCPEVGEYLKMSLEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK 953
>gi|14165258 ubiquitin carboxyl-terminal hydrolase CYLD isoform 1
[Homo sapiens]
Length = 956
Score = 1945 bits (5038), Expect = 0.0
Identities = 953/956 (99%), Positives = 953/956 (99%), Gaps = 3/956 (0%)
Query: 1 MSSGLWSQEKVTSPYWEERIFYLLLQECSVTDKQTQKLLKVPKGSIGQYIQDRSVGHSRI 60
MSSGLWSQEKVTSPYWEERIFYLLLQECSVTDKQTQKLLKVPKGSIGQYIQDRSVGHSRI
Sbjct: 1 MSSGLWSQEKVTSPYWEERIFYLLLQECSVTDKQTQKLLKVPKGSIGQYIQDRSVGHSRI 60
Query: 61 PSAKGKKNQIGLKILEQPHAVLFVDEKDVVEINEKFTELLLAITNCEERFSLFKNRNRLS 120
PSAKGKKNQIGLKILEQPHAVLFVDEKDVVEINEKFTELLLAITNCEERFSLFKNRNRLS
Sbjct: 61 PSAKGKKNQIGLKILEQPHAVLFVDEKDVVEINEKFTELLLAITNCEERFSLFKNRNRLS 120
Query: 121 KGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGV 180
KGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGV
Sbjct: 121 KGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGV 180
Query: 181 YQGKQLFQCDEDCGVFVALDKLELIEDDDTALESDYAGPGDTMQVELPPLEINSRVSLKV 240
YQGKQLFQCDEDCGVFVALDKLELIEDDDTALESDYAGPGDTMQVELPPLEINSRVSLKV
Sbjct: 181 YQGKQLFQCDEDCGVFVALDKLELIEDDDTALESDYAGPGDTMQVELPPLEINSRVSLKV 240
Query: 241 GETIESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFDGVQLCSFACVESTILLHIN 300
GETIESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFDGVQLCSFACVESTILLHIN
Sbjct: 241 GETIESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFDGVQLCSFACVESTILLHIN 300
Query: 301 DIIP---ESVTQERRPPKLAFMSRGVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNG 357
DIIP ESVTQERRPPKLAFMSRGVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNG
Sbjct: 301 DIIPALSESVTQERRPPKLAFMSRGVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNG 360
Query: 358 SSVDSQPQSKSKNTWYIDEVAEDPAKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLP 417
SSVDSQPQSKSKNTWYIDEVAEDPAKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLP
Sbjct: 361 SSVDSQPQSKSKNTWYIDEVAEDPAKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLP 420
Query: 418 FSLTKMPNTNGSIGHSPLSLSAQSVMEELNTAPVQESPPLAMPPGNSHGLEVGSLAEVKE 477
FSLTKMPNTNGSIGHSPLSLSAQSVMEELNTAPVQESPPLAMPPGNSHGLEVGSLAEVKE
Sbjct: 421 FSLTKMPNTNGSIGHSPLSLSAQSVMEELNTAPVQESPPLAMPPGNSHGLEVGSLAEVKE 480
Query: 478 NPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCR 537
NPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCR
Sbjct: 481 NPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCR 540
Query: 538 PDSRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNS 597
PDSRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNS
Sbjct: 541 PDSRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNS 600
Query: 598 CYLDSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIM 657
CYLDSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIM
Sbjct: 601 CYLDSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIM 660
Query: 658 KLRKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFME 717
KLRKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFME
Sbjct: 661 KLRKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFME 720
Query: 718 KNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDL 777
KNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDL
Sbjct: 721 KNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDL 780
Query: 778 LEDTPRQCRICGGLAMYECRECYDDPDISAGKIKQFCKTCNTQVHLHPKRLNHKYNPVSL 837
LEDTPRQCRICGGLAMYECRECYDDPDISAGKIKQFCKTCNTQVHLHPKRLNHKYNPVSL
Sbjct: 781 LEDTPRQCRICGGLAMYECRECYDDPDISAGKIKQFCKTCNTQVHLHPKRLNHKYNPVSL 840
Query: 838 PKDLPDWDWRHGCIPCQNMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNG 897
PKDLPDWDWRHGCIPCQNMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNG
Sbjct: 841 PKDLPDWDWRHGCIPCQNMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNG 900
Query: 898 FNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK 953
FNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK
Sbjct: 901 FNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK 956
>gi|116008447 CAP-GLY domain containing linker protein 2 isoform 1
[Homo sapiens]
Length = 1046
Score = 47.0 bits (110), Expect = 8e-05
Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 26/142 (18%)
Query: 417 PFSLTKMPNT--NGSIGHSPLSLSAQSVMEELNTA---------PVQESP-PLAMPPGNS 464
P LT+ P +GS HS SL+AQ++ TA P++ES ++ GN
Sbjct: 142 PSKLTRQPTAEGSGSDAHSVESLTAQNLSLHSGTATPPLTSRVIPLRESVLNSSVKTGNE 201
Query: 465 HGLEVGSLAEVKENPPFY-------------GVIRWIGQPPGLNEVLAGLELEDECAGCT 511
G + VK GV+R++G+ G+EL DE G
Sbjct: 202 SGSNLSDSGSVKRGEKDLRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVEL-DEPLGKN 260
Query: 512 DGTFRGTRYFTCALKKALFVKL 533
DG GTRYF C K LF +
Sbjct: 261 DGAVAGTRYFQCPPKFGLFAPI 282
Score = 32.3 bits (72), Expect = 2.2
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 13/129 (10%)
Query: 414 HSLPFSLTKMPNTNGSIG-------HSPLSLSAQSVMEELNTAPVQESP-PLAMPPGNSH 465
HS P T + + S SPL + A E P P A G+
Sbjct: 16 HSSPMGRTSTGSASSSAAVAASSKEGSPLHKQSSGPSSSPAAAAAPEKPGPKAAEVGDDF 75
Query: 466 --GLEVGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTC 523
VG V P GV++++G+ AG+ L+D G DG G RYF C
Sbjct: 76 LGDFVVGERVWVNGVKP--GVVQYLGETQFAPGQWAGVVLDDP-VGKNDGAVGGVRYFEC 132
Query: 524 ALKKALFVK 532
+ +F +
Sbjct: 133 PALQGIFTR 141
>gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2
[Homo sapiens]
Length = 1011
Score = 47.0 bits (110), Expect = 8e-05
Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 26/142 (18%)
Query: 417 PFSLTKMPNT--NGSIGHSPLSLSAQSVMEELNTA---------PVQESP-PLAMPPGNS 464
P LT+ P +GS HS SL+AQ++ TA P++ES ++ GN
Sbjct: 142 PSKLTRQPTAEGSGSDAHSVESLTAQNLSLHSGTATPPLTSRVIPLRESVLNSSVKTGNE 201
Query: 465 HGLEVGSLAEVKENPPFY-------------GVIRWIGQPPGLNEVLAGLELEDECAGCT 511
G + VK GV+R++G+ G+EL DE G
Sbjct: 202 SGSNLSDSGSVKRGEKDLRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVEL-DEPLGKN 260
Query: 512 DGTFRGTRYFTCALKKALFVKL 533
DG GTRYF C K LF +
Sbjct: 261 DGAVAGTRYFQCPPKFGLFAPI 282
Score = 32.3 bits (72), Expect = 2.2
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 13/129 (10%)
Query: 414 HSLPFSLTKMPNTNGSIG-------HSPLSLSAQSVMEELNTAPVQESP-PLAMPPGNSH 465
HS P T + + S SPL + A E P P A G+
Sbjct: 16 HSSPMGRTSTGSASSSAAVAASSKEGSPLHKQSSGPSSSPAAAAAPEKPGPKAAEVGDDF 75
Query: 466 --GLEVGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTC 523
VG V P GV++++G+ AG+ L+D G DG G RYF C
Sbjct: 76 LGDFVVGERVWVNGVKP--GVVQYLGETQFAPGQWAGVVLDDP-VGKNDGAVGGVRYFEC 132
Query: 524 ALKKALFVK 532
+ +F +
Sbjct: 133 PALQGIFTR 141
>gi|18496983 CAP-GLY domain containing linker protein 3 [Homo
sapiens]
Length = 547
Score = 43.1 bits (100), Expect = 0.001
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 234 SRVSLKVGETI-----ESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFDGVQ--LC 286
S + L++G+ + ++GT+ FC + + G +VGV++D P G DG GV+ +C
Sbjct: 290 SALGLRLGDRVLLDGQKTGTLRFCGTT--EFASGQWVGVELDEPEGKNDGSVGGVRYFIC 347
Query: 287 S-----FACVESTILLHINDIIPESVTQERRPPKLAFMSRGVGDKGSSSHNKPKATGSTS 341
FA V + D P SVT R P++ F SR G KG H K T S+
Sbjct: 348 PPKQGLFASVSK--ISKAVDAPPSSVTSTPRTPRMDF-SRVTG-KGRREHKGKKKTPSSP 403
Query: 342 DPGN 345
G+
Sbjct: 404 SLGS 407
Score = 34.3 bits (77), Expect = 0.57
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 439 AQSVMEELNTAPVQESPPL--AMP----------PGN----SHGLEVGSLAEVKENPPFY 482
A V +EL T ++E+ PL A+P PGN + GL +G V +
Sbjct: 251 AALVAKELRTL-LEEAVPLSCALPKVTLPNYDNVPGNLMLSALGLRLGD--RVLLDGQKT 307
Query: 483 GVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKL 533
G +R+ G + G+EL DE G DG+ G RYF C K+ LF +
Sbjct: 308 GTLRFCGTTEFASGQWVGVEL-DEPEGKNDGSVGGVRYFICPPKQGLFASV 357
Score = 32.0 bits (71), Expect = 2.8
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 483 GVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALF 530
G++R+ G+ G+EL D+ G DG+ G RYFTC + +F
Sbjct: 430 GIVRFYGKTDFAPGYWYGIEL-DQPTGKHDGSVFGVRYFTCPPRHGVF 476
>gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens]
Length = 967
Score = 40.4 bits (93), Expect = 0.008
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 328 SSSHNKPKATGSTSDPGNRNRSELFYTLNGSSVD----SQPQSKSKNTWYIDEVAEDPAK 383
S+SH+ P T + + R+ S +T + ++++ S P S T PA
Sbjct: 200 STSHSNPSLTSAITTTETRSHSPPIFTSSITTIETTSHSTPSFTSLMTTTETTSLSPPAF 259
Query: 384 SLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLPFSLTKMPNTNGSIGHSPLSLSA 439
+ + +T+ + SPP + TTE HS P S T + T S HSPLS ++
Sbjct: 260 TFSISTTETNSHSPPSFTSSI--ATTETPSHSPP-SFTSLITTTESTSHSPLSFTS 312
>gi|239752529 PREDICTED: similar to mucin [Homo sapiens]
Length = 594
Score = 40.4 bits (93), Expect = 0.008
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 328 SSSHNKPKATGSTSDPGNRNRSELFYTLNGSSVD----SQPQSKSKNTWYIDEVAEDPAK 383
S+SH+ P T + + R+ S +T + ++++ S P S T PA
Sbjct: 29 STSHSNPSLTSAITTTETRSHSPPIFTSSITTIETTSHSTPSFTSLMTTTETTSLSPPAF 88
Query: 384 SLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLPFSLTKMPNTNGSIGHSPLSLSA 439
+ + +T+ + SPP + TTE HS P S T + T S HSPLS ++
Sbjct: 89 TFSISTTETNSHSPPSFTSSI--ATTETPSHSPP-SFTSLITTTESTSHSPLSFTS 141
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 39.7 bits (91), Expect = 0.014
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 144 GVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLE 203
G V + G L +G + GV +L+E +G+ DG QG++ F CDE G+FV +++
Sbjct: 42 GTVAYVGATLF---ATGKWVGV-ILDEAKGKN--DGTVQGRKYFTCDEGHGIFVRQSQIQ 95
Query: 204 LIED--DDTALES 214
+ ED D T+ E+
Sbjct: 96 VFEDGADTTSPET 108
Score = 33.1 bits (74), Expect = 1.3
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 467 LEVGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALK 526
L VGS EV G + ++G G+ L DE G DGT +G +YFTC
Sbjct: 27 LRVGSRVEVI-GKGHRGTVAYVGATLFATGKWVGVIL-DEAKGKNDGTVQGRKYFTCDEG 84
Query: 527 KALFVK 532
+FV+
Sbjct: 85 HGIFVR 90
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 39.7 bits (91), Expect = 0.014
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 144 GVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLE 203
G V + G L +G + GV +L+E +G+ DG QG++ F CDE G+FV +++
Sbjct: 42 GTVAYVGATLF---ATGKWVGV-ILDEAKGKN--DGTVQGRKYFTCDEGHGIFVRQSQIQ 95
Query: 204 LIED--DDTALES 214
+ ED D T+ E+
Sbjct: 96 VFEDGADTTSPET 108
Score = 33.1 bits (74), Expect = 1.3
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 467 LEVGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALK 526
L VGS EV G + ++G G+ L DE G DGT +G +YFTC
Sbjct: 27 LRVGSRVEVI-GKGHRGTVAYVGATLFATGKWVGVIL-DEAKGKNDGTVQGRKYFTCDEG 84
Query: 527 KALFVK 532
+FV+
Sbjct: 85 HGIFVR 90
>gi|239742276 PREDICTED: hypothetical protein XP_002342471 [Homo
sapiens]
Length = 530
Score = 38.1 bits (87), Expect = 0.039
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 27/165 (16%)
Query: 530 FVKLKSCRPDSRFASLQPVS----------NQIERCNSLAFGGYLSEVVEENTPPKMEKE 579
F KL S RPD+ FA +Q S +++ C+ LA ++ PP +
Sbjct: 17 FSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLA--PVARQLAPREKPPLSSRR 74
Query: 580 GLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRT 639
+ G+Q N+CY++++L CL + + +L R + + ++
Sbjct: 75 PAAV----GAGLQNMGNTCYVNASLQCLTYKPPLANYMLFREHSQTCHRHKGCMLCTMQA 130
Query: 640 EIVNPLRIYGYVCATKIMKLRKILEKVEAASGF-TSEEKDPEEFL 683
I L I G+V I A+GF +++D EFL
Sbjct: 131 HITRALHIPGHV----------IQPSQALAAGFHRGKQEDAHEFL 165
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 38.1 bits (87), Expect = 0.039
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 483 GVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALF 530
GV+R++G+ G+EL DE G DG GTRYF C K LF
Sbjct: 226 GVVRFLGETDFAKGEWCGVEL-DEPLGKNDGAVAGTRYFQCQPKYGLF 272
Score = 34.3 bits (77), Expect = 0.57
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 469 VGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKA 528
VG V N P G I+++G+ AG+ L DE G DG+ G RYF C K
Sbjct: 60 VGERVWVNGNKP--GFIQFLGETQFAPGQWAGIVL-DEPIGKNDGSVAGVRYFQCEPLKG 116
Query: 529 LFVK 532
+F +
Sbjct: 117 IFTR 120
Score = 32.3 bits (72), Expect = 2.2
Identities = 33/104 (31%), Positives = 44/104 (42%), Gaps = 17/104 (16%)
Query: 102 AITNCEERFSLFKNRNRLSKGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGI 161
+I+N E S+ K L G ++ VG G + GVVRF G G
Sbjct: 195 SISNLSEAGSIKKGERELKIGDRVLVG---------GTKA--GVVRFLGET---DFAKGE 240
Query: 162 FFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELI 205
+ GVEL E G DG G + FQC G+F + K+ I
Sbjct: 241 WCGVELDEP---LGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKI 281
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 38.1 bits (87), Expect = 0.039
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 483 GVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALF 530
GV+R++G+ G+EL DE G DG GTRYF C K LF
Sbjct: 226 GVVRFLGETDFAKGEWCGVEL-DEPLGKNDGAVAGTRYFQCQPKYGLF 272
Score = 34.3 bits (77), Expect = 0.57
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 469 VGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKA 528
VG V N P G I+++G+ AG+ L DE G DG+ G RYF C K
Sbjct: 60 VGERVWVNGNKP--GFIQFLGETQFAPGQWAGIVL-DEPIGKNDGSVAGVRYFQCEPLKG 116
Query: 529 LFVK 532
+F +
Sbjct: 117 IFTR 120
Score = 32.3 bits (72), Expect = 2.2
Identities = 33/104 (31%), Positives = 44/104 (42%), Gaps = 17/104 (16%)
Query: 102 AITNCEERFSLFKNRNRLSKGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGI 161
+I+N E S+ K L G ++ VG G + GVVRF G G
Sbjct: 195 SISNLSEAGSIKKGERELKIGDRVLVG---------GTKA--GVVRFLGET---DFAKGE 240
Query: 162 FFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELI 205
+ GVEL E G DG G + FQC G+F + K+ I
Sbjct: 241 WCGVELDEP---LGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKI 281
>gi|171184451 centrosome-associated protein 350 [Homo sapiens]
Length = 3117
Score = 37.0 bits (84), Expect = 0.088
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 143 PGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKL 202
PG++RF+G + G + GVEL + +G +G Y G F+C E G+F K+
Sbjct: 2510 PGILRFKGETSFAK---GFWAGVEL---DKPEGNNNGTYDGIAYFECKEKHGIFAPPQKI 2563
Query: 203 ELIEDD 208
I ++
Sbjct: 2564 SHIPEN 2569
Score = 34.7 bits (78), Expect = 0.44
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 451 VQESPPLAMPPGNSH--GLEVGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDECA 508
V ESP LA P +G + P G++R+ G+ AG+EL D+
Sbjct: 2479 VTESPSLASVPTADELFDFHIGDRVLIGNVQP--GILRFKGETSFAKGFWAGVEL-DKPE 2535
Query: 509 GCTDGTFRGTRYFTCALKKALF 530
G +GT+ G YF C K +F
Sbjct: 2536 GNNNGTYDGIAYFECKEKHGIF 2557
Score = 30.8 bits (68), Expect = 6.3
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 262 GYFVGVDMDNPIGNWDGRFDGVQLCSFACVE 292
G++ GV++D P GN +G +DG+ F C E
Sbjct: 2524 GFWAGVELDKPEGNNNGTYDGI--AYFECKE 2552
>gi|45935385 SAM and SH3 domain containing 1 [Homo sapiens]
Length = 1247
Score = 36.2 bits (82), Expect = 0.15
Identities = 76/325 (23%), Positives = 121/325 (37%), Gaps = 65/325 (20%)
Query: 197 VALDKLELIEDDDTALESDYAGPGDTMQVELPPLE-INSRVS--LKVGETIESGTVIFCD 253
V L +EL+++ D+ SD +G + + V+ L + R S + E +E+G
Sbjct: 686 VLLTAVELLQEYDS--NSDQSGSQEKLLVDSQGLSGCSPRDSGCYESSENLENGKTRKAS 743
Query: 254 VLPGKESLGYFVGVDMDNPIGNWDGRFDGVQLCSFACVESTILLHINDIIPESVTQERRP 313
+L K S + N +GN+ + L+ D + + + R
Sbjct: 744 LLSAKSSTEPSLKSFSRNQLGNYP---------------TLPLMKSGDALKQGQEEGR-- 786
Query: 314 PKLAFMSRGVGDKGSSSHNKPKATGSTSDPGNRNRSEL-------FYTLNG-SSVDSQPQ 365
+ G+ S S + P TG N+NR L TL G +VD+ P+
Sbjct: 787 -----LGGGLAPDTSKSCDPPGVTGL-----NKNRRSLPVSICRSCETLEGPQTVDTWPR 836
Query: 366 SKSKNTWYID---------EVAEDPAKSLTEISTDFDRSSPPLQPPPVNS------LTTE 410
S S + ++ EV E P + + E+ SS QP +S L T+
Sbjct: 837 SHSLDDLQVEPGAEQDVPTEVTEPPPQIVPEVPQKTTASSTKAQPLEQDSAVDNALLLTQ 896
Query: 411 NRFHSLPFSLTKMPNTNGSIGHSPLSLSAQSVMEELNTAPVQESPPLAMPPGNSHGLEVG 470
++ S P LT GSI S LS + A PPG HGL
Sbjct: 897 SKRFSEPQKLTTK-KLEGSIAASGRGLSPPQCLPRNYDA---------QPPGAKHGLART 946
Query: 471 SLAEVKENPPFYGVIRWIGQPPGLN 495
L ++ F G +G G++
Sbjct: 947 PLEGHRKGHEFEGTHHPLGTKEGVD 971
>gi|194294554 SET binding protein 1 isoform a [Homo sapiens]
Length = 1596
Score = 35.8 bits (81), Expect = 0.20
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 360 VDSQPQSKSKNTWYIDEVAEDPAKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLPFS 419
V SQP + + + VA PA ++ +ST S+ L P +TE F L
Sbjct: 752 VSSQPDVPAVPSNFQSLVASSPA-AMHPLSTQLGGSNGNLSPA-----STETNFSELK-- 803
Query: 420 LTKMPNTNGSIGHSPLSLSAQSVMEELNTAPVQESPPLAMPPGNSHGLEVGSLAEVKENP 479
MPN P+S + +++ + SPP M SH E+GSL E+ +P
Sbjct: 804 --TMPNLQ------PISALPTKTQKGIHSGTWKLSPPRLMANSPSHLCEIGSLKEITLSP 855
>gi|50428925 cytoskeleton associated protein 1 [Homo sapiens]
Length = 244
Score = 35.8 bits (81), Expect = 0.20
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Query: 444 EELNTAPVQESPPLAMPPGNSHGLEVGSLAEVKE--NPPFYGVIRWIGQPPGLNEVLAGL 501
EE + + LA + + VGS EV+ P G + ++G G+
Sbjct: 136 EERAQQEAEAAQRLAEEKAQASSIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPGYWIGV 195
Query: 502 ELEDECAGCTDGTFRGTRYFTCALKKALFVK 532
DE G DG+ G RYF C K FVK
Sbjct: 196 RY-DEPLGKNDGSVNGKRYFECQAKYGAFVK 225
Score = 32.0 bits (71), Expect = 2.8
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 206 EDDDTALESDYAGPGDTMQVELPPLEINSRVSLKV-GETIESGTVIFCDVLPGKESLGYF 264
E++ E++ A + + + + SR ++ G++ GTV++ + K GY+
Sbjct: 135 EEERAQQEAEAAQRLAEEKAQASSIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKP--GYW 192
Query: 265 VGVDMDNPIGNWDGRFDG 282
+GV D P+G DG +G
Sbjct: 193 IGVRYDEPLGKNDGSVNG 210
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 34.7 bits (78), Expect = 0.44
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 398 PLQPPPVNSLTTENRFHSLPFSLTKMPNTNGSIGHSPL--SLSAQSVMEELNTAPVQESP 455
PL PPP S T S P +++ + SPL +L +EE +P E
Sbjct: 448 PLSPPPEESPT------SPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEES 501
Query: 456 PLAMPPGNS--HGLEVGSLAEVKENPPFYGVIRWIGQPP 492
PL+ PP +S LE L+ +E+PP + + PP
Sbjct: 502 PLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPP 540
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 33.5 bits (75), Expect = 0.97
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 377 VAEDPAKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLPFSLTKMPNTNGSIGHSPLS 436
+ D +++T +T+ S + PP + T +P + P T+ G SP +
Sbjct: 11907 ITTDKPQTVTSWNTETSPSVTSVGPPEFSRTVTGTTMTLIPSEMPTPPKTSHGEGVSPTT 11966
Query: 437 LSAQSVMEELNTAPVQESPPLA 458
+ +++E N A SP +A
Sbjct: 11967 ILRTTMVEATNLATTGSSPTVA 11988
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 33.5 bits (75), Expect = 0.97
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 30/150 (20%)
Query: 358 SSVDSQPQSKSKNT-----------WYIDEVAEDPA--------KSLTEISTDFDRSSPP 398
S S P++K +N+ + E +E+PA L E+ST SSP
Sbjct: 1214 SGAGSSPETKEQNSALPTSSQDEELMEVVEKSEEPAGQILSHLSSELKEMSTSNFESSPE 1273
Query: 399 LQPPPVNSLTTENRFHSLPFSLTKMPNTNGSIGHSPLSLSAQSVMEELNTAPVQES---P 455
++ P SLT + ++P+ S G S +EL+ +P++E+
Sbjct: 1274 VEERPAVSLTLDQSQSQASLEAVEVPSMASSWGGPHFS----PEHKELSNSPLRENSFGS 1329
Query: 456 PLAMPPGNSHGLEV--GSLAEVKE--NPPF 481
PL G E+ G +EVKE N PF
Sbjct: 1330 PLEFRNSGPLGTEMNTGFSSEVKEDLNGPF 1359
Score = 31.2 bits (69), Expect = 4.8
Identities = 36/157 (22%), Positives = 60/157 (38%), Gaps = 11/157 (7%)
Query: 304 PESVTQERRPPKLAFMSRGVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNGSSVDSQ 363
P + T ++P LA + + SSS + ++ S+S + + S SS S
Sbjct: 2509 PPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSS--------SSGSSS 2560
Query: 364 PQSKSKNTWYIDEVAEDPAKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLPFSLTKM 423
S+ + EVA S T + R P +P P + R S S +
Sbjct: 2561 SDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAK---RKRRSSSSSSSSSSS 2617
Query: 424 PNTNGSIGHSPLSLSAQSVMEELNTAPVQESPPLAMP 460
+++ S S S S+ S +++ SP A P
Sbjct: 2618 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKP 2654
>gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]
Length = 2382
Score = 33.1 bits (74), Expect = 1.3
Identities = 39/174 (22%), Positives = 62/174 (35%), Gaps = 19/174 (10%)
Query: 304 PESVTQERRPPKLAFMSRGVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNGSSVDSQ 363
P + P+ AF+SR V D GS S + P S S P L + N S + S
Sbjct: 2004 PSHLNGPSSDPEAAFLSRDV-DDGSGSPHSPHQLSSKSLPSQNLSQSLSNSFNSSYMSSD 2062
Query: 364 PQS--------------KSKNTWYIDEVAEDPAKSLTEISTDFDRSSPPLQPPPVNSLTT 409
+S + K+ I ++ + + T + P + PP L+
Sbjct: 2063 NESDIEDEDLKLELRRLRDKHLKEIQDLQSRQKHEIESLYTKLGKVPPAVIIPPAAPLSG 2122
Query: 410 ENRFHSLPFSLTKMPNTNGSIGHSPLSLSAQSVMEELNTAPVQESPPLAMPPGN 463
R + S + + S+G+ LS + + A V PPGN
Sbjct: 2123 RRRRPTK--SKGSKSSRSSSLGNKSPQLSGN--LSGQSAASVLHPQQTLHPPGN 2172
Score = 31.2 bits (69), Expect = 4.8
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 381 PAKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHS-----LPFSLTKMPNTNGSIGHSPL 435
P SLT++ R + P P + L F S + S + P N + HS
Sbjct: 1243 PTSSLTQVVHSAGRRFI-VSPVPESRLRESKVFPSEITDTVAASTAQSPGMN--LSHSAS 1299
Query: 436 SLSAQSVMEELNTAPVQESPPLAMPPGNSH 465
SLS Q EL A + E P A PP SH
Sbjct: 1300 SLSLQQAFSELRRAQMTEGPNTA-PPNFSH 1328
>gi|169172880 PREDICTED: Inactive ubiquitin carboxyl-terminal
hydrolase 17-like protein 8 [Homo sapiens]
Length = 530
Score = 33.1 bits (74), Expect = 1.3
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 16/88 (18%)
Query: 530 FVKLKSCRPDSRFASLQ--------PVSNQ--IERCNSLAFGGYLSEVVEENTPPKMEKE 579
F KL S RPD+ FA +Q P+S++ ++ C+ LA V + P +
Sbjct: 17 FSKLTSPRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLA------PVARQLAPREKLPL 70
Query: 580 GLEIMIGKKKGIQGHYNSCYLDSTLFCL 607
G+Q N+CYL+++L CL
Sbjct: 71 SSRRPAAVGAGLQNMGNTCYLNASLQCL 98
>gi|109689723 abl interactor 2 [Homo sapiens]
Length = 475
Score = 33.1 bits (74), Expect = 1.3
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 30/152 (19%)
Query: 340 TSDPGNRNRSELFYTLNGSSVDSQPQSKSKNTWYIDEVAEDPAKSLTEISTDFDRSSPPL 399
T+ RNR+ Y+ +GSS S P S+S + E+ + SPP
Sbjct: 225 TASVNQRNRT---YSSSGSSGGSHPSSRSSS-------RENSGSGSVGVPIAVPTPSPPS 274
Query: 400 QPP--PVNSLTTENRFHSL--PFSLTKMPNTNGSIGH-SPLSLSAQ-SVMEELNTAPVQE 453
P PV +F+S+ P S P GS+ + P S+++Q S+ ++N P
Sbjct: 275 VFPGHPV-------QFYSMNRPASRHTPPTIGGSLPYRRPPSITSQTSLQNQMNGGPFYS 327
Query: 454 SPPLAMPPGNSHGLEV-------GSLAEVKEN 478
P+++ P L+V G +A V+EN
Sbjct: 328 QNPVSLAPPPPSILQVTPQLPLMGFVARVQEN 359
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 32.7 bits (73), Expect = 1.7
Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 11/108 (10%)
Query: 322 GVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNGSSVDSQPQSKSKNTWYIDEVAEDP 381
GV + ++SH+ P +T +T PG+ S L ++ S P S ++ T D
Sbjct: 1742 GVSQESTASHSSPGSTDTTLSPGSTTASSL--GPESTTFHSSPGS-TETTLLPDNTT--- 1795
Query: 382 AKSLTEISTDFDRS--SPPLQPPPVNSLTTENR---FHSLPFSLTKMP 424
A L E ST S SP P S T + F S P S MP
Sbjct: 1796 ASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPSSKDTMP 1843
Score = 32.7 bits (73), Expect = 1.7
Identities = 40/132 (30%), Positives = 53/132 (40%), Gaps = 18/132 (13%)
Query: 305 ESVTQERRPPKL---AFMSR----GVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNG 357
ES T RP + AF S GV + ++SH+ P +T +T PG+ S L
Sbjct: 4358 ESTTSHSRPGSMHTTAFPSSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSL--GPES 4415
Query: 358 SSVDSQPQSKSKNTWYIDEVAEDPAKSLTEISTDFDRS--SPPLQPPPVNSLTTENR--- 412
++ S P S ++ T D A L E ST S SP P S T +
Sbjct: 4416 TTFHSSPGS-TETTLLPDNTT---ASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTT 4471
Query: 413 FHSLPFSLTKMP 424
F S P S P
Sbjct: 4472 FQSWPNSKDTTP 4483
Score = 32.3 bits (72), Expect = 2.2
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 21/167 (12%)
Query: 322 GVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNGSSVDS-------------QPQSKS 368
G ++ ++SH+ ATG+ P S L S + S P
Sbjct: 4628 GRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGSTTTPGLSE 4687
Query: 369 KNTWYIDEVAEDPAKSLTEISTDFDRS--SPPLQPPPVNSLTTENRFHSLPFSL----TK 422
K+T + + P + ST RS S + PV + TT + S L T
Sbjct: 4688 KSTTFHSSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTA 4747
Query: 423 MPNTNGSIG--HSPLSLSAQSVMEELNTAPVQESPPLAMPPGNSHGL 467
++ GS H P S +A EE T+ + ++ PP + L
Sbjct: 4748 YHSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTTSAL 4794
>gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens]
Length = 1486
Score = 32.7 bits (73), Expect = 1.7
Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 6/133 (4%)
Query: 328 SSSHNKPKATGS------TSDPGNRNRSELFYTLNGSSVDSQPQSKSKNTWYIDEVAEDP 381
++SH+ P T S TS+ S Y+ +S + + + + P
Sbjct: 581 TTSHSTPGFTSSITTTETTSESTPSLSSSTIYSTVSTSTTAITSHFTTSETAVTPTPVTP 640
Query: 382 AKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLPFSLTKMPNTNGSIGHSPLSLSAQS 441
+ T+I T R+ P SLTT F S+P ++ +P I SP S ++
Sbjct: 641 SSLSTDIPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTET 700
Query: 442 VMEELNTAPVQES 454
T+P +
Sbjct: 701 SSLVGTTSPTMST 713
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 32.7 bits (73), Expect = 1.7
Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 11/108 (10%)
Query: 322 GVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNGSSVDSQPQSKSKNTWYIDEVAEDP 381
GV + ++SH+ P +T +T PG+ S L ++ S P S ++ T D
Sbjct: 1229 GVSQESTASHSSPGSTDTTLSPGSTTASSL--GPESTTFHSSPGS-TETTLLPDNTT--- 1282
Query: 382 AKSLTEISTDFDRS--SPPLQPPPVNSLTTENR---FHSLPFSLTKMP 424
A L E ST S SP P S T + F S P S MP
Sbjct: 1283 ASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPSSKDTMP 1330
>gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens]
Length = 451
Score = 32.7 bits (73), Expect = 1.7
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 13/176 (7%)
Query: 309 QERRPPKLA--FMSRGVGDKGSSSHNKPKATGSTSDPG--NRNRSELFYTLNGSSVDSQP 364
Q ++PP+L +RG+ + P A G +DPG R R+E G + ++P
Sbjct: 6 QPQQPPQLGPGAAARGMKRESELELPVPGAGGDGADPGLSKRPRTEEAAADGGGGMQNEP 65
Query: 365 QSKSKNTWYIDEVAEDPAKSLTEISTDFDRSSPPLQPPPVNSLTTENRFHSLPFSLTKMP 424
+ + + + + + T + ++ P PPP N + TE + +
Sbjct: 66 LTPGYHGFPARDSQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTE-------YGVPHTQ 118
Query: 425 NTNGSIGHSPLSL--SAQSVMEELNTAPVQESPPLAMPPGNSHGLEVGSLAEVKEN 478
+ G G L+L S Q+ E+ + +P ++ L G + S + EN
Sbjct: 119 DYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSEN 174
>gi|153792150 deubiquitinating enzyme 3 [Homo sapiens]
Length = 530
Score = 32.7 bits (73), Expect = 1.7
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 530 FVKLKSCRPDSRFASLQ--------PVSNQ--IERCNSLAFGGYLSEVVEENTPPKMEKE 579
F KL S RPD+ FA +Q P+S++ ++ C+ LA V + P K
Sbjct: 17 FSKLTSSRPDAAFAEIQRTSLPEKSPLSSEARVDLCDDLA------PVARQLAPRKKLPL 70
Query: 580 GLEIMIGKKKGIQGHYNSCYLDSTLFCL 607
G+Q N+CY +++L CL
Sbjct: 71 SSRRPAAVGAGLQNMGNTCYENASLQCL 98
>gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [Homo
sapiens]
Length = 1379
Score = 32.3 bits (72), Expect = 2.2
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 762 LFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPD--ISAGKIKQFCKTCNT 819
L +K E +LL D RQC C CYD PD + I CK ++
Sbjct: 617 LLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSS 676
Query: 820 QVHL 823
+ +L
Sbjct: 677 RQYL 680
>gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo
sapiens]
Length = 1560
Score = 32.3 bits (72), Expect = 2.2
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 762 LFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPD--ISAGKIKQFCKTCNT 819
L +K E +LL D RQC C CYD PD + I CK ++
Sbjct: 684 LLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSS 743
Query: 820 QVHL 823
+ +L
Sbjct: 744 RQYL 747
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,762,510
Number of Sequences: 37866
Number of extensions: 1928222
Number of successful extensions: 5696
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 5542
Number of HSP's gapped (non-prelim): 222
length of query: 953
length of database: 18,247,518
effective HSP length: 112
effective length of query: 841
effective length of database: 14,006,526
effective search space: 11779488366
effective search space used: 11779488366
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.