DUB3 5398

Name: DUB3	Sequence: fasta or formatted (530aa)		NCBI GI: 153792150
Description: deubiquitinating enzyme 3		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 42 2 C cysteine 3.6 19 2 D aspartate 4.7 25 2 E glutamate 5.7 30 2 F phenylalanine 2.5 13 1 G glycine 5.1 27 2 H histidine 4.7 25 2 I isoleucine 2.5 13 1 K lysine 6.4 34 2 L leucine 10.6 56 2 M methionine 2.1 11 1 N asparagine 3.2 17 1 P proline 5.1 27 2 Q glutamine 7.4 39 2 R arginine 5.3 28 2 S serine 7.9 42 2 T threonine 5.8 31 2 V valine 5.3 28 1 W tryptophan 1.3 7 1 Y tyrosine 3.0 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 deubiquitinating enzyme 3 USP17L3 0.968 PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17... USP17L4 0.964 PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... USP17L8 0.963 PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... LOC100287327 0.946 PREDICTED: hypothetical protein XP_002342475 LOC728373 0.945 PREDICTED: similar to deubiquitinating enzyme DUB1 ... LOC100287513 0.945 PREDICTED: hypothetical protein XP_002342480 LOC100287441 0.945 PREDICTED: hypothetical protein XP_002342478 LOC100287178 0.945 PREDICTED: hypothetical protein XP_002342472 LOC100287364 0.943 PREDICTED: hypothetical protein XP_002342476 LOC100287404 0.941 PREDICTED: hypothetical protein XP_002342477 LOC728419 0.940 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728405 0.940 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728400 0.940 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728393 0.940 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728379 0.940 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728373 0.940 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728369 0.940 PREDICTED: similar to deubiquitinating enzyme 3 [Ho... USP17 0.940 ubiquitin specific peptidase 17 LOC728379 0.940 PREDICTED: similar to deubiquitinating enzyme DUB1 ... USP17L5 0.939 PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17... LOC100288520 0.936 PREDICTED: hypothetical protein XP_002342486 LOC100287478 0.935 PREDICTED: hypothetical protein XP_002342479 LOC100287205 0.934 PREDICTED: hypothetical protein XP_002342473 LOC100287238 0.931 PREDICTED: hypothetical protein XP_002342474 LOC100287144 0.926 PREDICTED: hypothetical protein XP_002342471 USP17L7 0.910 PREDICTED: Inactive ubiquitin carboxyl-terminal hydr... USP17L7 0.906 PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... USP17L7 0.906 PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... USP17L8 0.687 PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.