Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: USP17L8 Sequence: fasta or formatted (530aa) NCBI GI: 169172880
Description:

PREDICTED: Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [385aa] PREDICTED: Inactive ubiquitin carboxyl-terminal hydrolase 17-like...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         39           2
 C cysteine            3.8         20           2
 D aspartate           4.5         24           2
 E glutamate           6.0         32           2
 F phenylalanine       2.5         13           1
 G glycine             5.1         27           2
 H histidine           4.5         24           2
 I isoleucine          2.5         13           1
 K lysine              5.8         31           2
 L leucine            10.8         57           2
 M methionine          2.6         14           1
 N asparagine          3.8         20           1
 P proline             5.7         30           2
 Q glutamine           7.2         38           2
 R arginine            4.7         25           2
 S serine              7.9         42           2
 T threonine           5.5         29           2
 V valine              5.3         28           1
 W tryptophan          1.3          7           1
 Y tyrosine            3.2         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... 
USP17L4               0.976   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd...
DUB3                  0.958   deubiquitinating enzyme 3 
USP17L3               0.947   PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17...
LOC100287327          0.932   PREDICTED: hypothetical protein XP_002342475 
LOC728373             0.929   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC100287513          0.929   PREDICTED: hypothetical protein XP_002342480 
LOC100287441          0.929   PREDICTED: hypothetical protein XP_002342478 
LOC100287178          0.929   PREDICTED: hypothetical protein XP_002342472 
LOC100287364          0.927   PREDICTED: hypothetical protein XP_002342476 
LOC728419             0.926   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728405             0.926   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728400             0.926   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728393             0.926   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728379             0.926   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728373             0.926   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728369             0.926   PREDICTED: similar to deubiquitinating enzyme 3 [Ho...
LOC100287404          0.926   PREDICTED: hypothetical protein XP_002342477 
USP17L5               0.925   PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17...
USP17                 0.925   ubiquitin specific peptidase 17 
LOC728379             0.925   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC100287478          0.921   PREDICTED: hypothetical protein XP_002342479 
LOC100288520          0.921   PREDICTED: hypothetical protein XP_002342486 
LOC100287205          0.918   PREDICTED: hypothetical protein XP_002342473 
LOC100287238          0.916   PREDICTED: hypothetical protein XP_002342474 
LOC100287144          0.912   PREDICTED: hypothetical protein XP_002342471 
USP17L7               0.908   PREDICTED: Inactive ubiquitin carboxyl-terminal hydr...
USP17L7               0.903   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd...
USP17L7               0.903   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd...
USP17L8               0.701   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press