CYLD 460

Name: CYLD	Sequence: fasta or formatted (953aa)		NCBI GI: 109637776
Description: ubiquitin carboxyl-terminal hydrolase CYLD isoform 2		Referenced in: Dynein and Dynactin NF-kappaB Pathway Ubiquitin and Related Protein Modifications
Other entries for this name: alt mRNA [953aa] ubiquitin carboxyl-terminal hydrolase CYLD isoform 2 alt prot [956aa] ubiquitin carboxyl-terminal hydrolase CYLD isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.9 37 2 C cysteine 3.3 31 1 D aspartate 5.5 52 3 E glutamate 8.0 76 2 F phenylalanine 4.9 47 2 G glycine 7.1 68 2 H histidine 1.7 16 2 I isoleucine 5.1 49 2 K lysine 6.6 63 3 L leucine 10.3 98 3 M methionine 2.0 19 1 N asparagine 4.1 39 1 P proline 6.2 59 3 Q glutamine 4.3 41 2 R arginine 4.5 43 2 S serine 8.0 76 3 T threonine 4.5 43 2 V valine 6.2 59 2 W tryptophan 0.9 9 1 Y tyrosine 2.9 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin carboxyl-terminal hydrolase CYLD isoform ... CYLD 1.000 ubiquitin carboxyl-terminal hydrolase CYLD isoform ... CYLD 0.997 ubiquitin carboxyl-terminal hydrolase CYLD isoform 1... CLIP2 0.011 CAP-GLY domain containing linker protein 2 isoform ... CLIP2 0.011 CAP-GLY domain containing linker protein 2 isoform 2... CLIP3 0.009 CAP-GLY domain containing linker protein 3 LOC100134138 0.008 PREDICTED: similar to mucin, partial LOC100133408 0.008 PREDICTED: similar to mucin DCTN1 0.008 dynactin 1 isoform 3 DCTN1 0.008 dynactin 1 isoform 1 LOC100287144 0.007 PREDICTED: hypothetical protein XP_002342471 CLIP1 0.007 restin isoform b CLIP1 0.007 restin isoform a CEP350 0.006 centrosome-associated protein 350 SASH1 0.006 SAM and SH3 domain containing 1 SETBP1 0.006 SET binding protein 1 isoform a TBCB 0.006 cytoskeleton associated protein 1 MLL2 0.005 myeloid/lymphoid or mixed-lineage leukemia 2 MUC16 0.004 mucin 16 SRRM2 0.004 splicing coactivator subunit SRm300 WNK1 0.004 WNK lysine deficient protein kinase 1 USP17L8 0.004 PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... ABI2 0.004 abl interactor 2 MUC12 0.004 PREDICTED: mucin 12 MUC3A 0.004 PREDICTED: mucin 3A, intestinal MUC12 0.004 PREDICTED: mucin 12, cell surface associated RBM9 0.004 RNA binding motif protein 9 isoform 5 DUB3 0.004 deubiquitinating enzyme 3 KDM5C 0.004 jumonji, AT rich interactive domain 1C isoform 2 [H... KDM5C 0.004 jumonji, AT rich interactive domain 1C isoform 1 [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.