CLIP3 9904

Name: CLIP3	Sequence: fasta or formatted (547aa)		NCBI GI: 18496983
Description: CAP-GLY domain containing linker protein 3		Referenced in: Dynein and Dynactin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 48 3 C cysteine 2.2 12 2 D aspartate 6.0 33 1 E glutamate 5.3 29 8 F phenylalanine 3.7 20 2 G glycine 8.2 45 2 H histidine 2.4 13 1 I isoleucine 2.7 15 1 K lysine 5.3 29 3 L leucine 8.6 47 2 M methionine 2.0 11 1 N asparagine 2.6 14 1 P proline 8.8 48 3 Q glutamine 4.2 23 2 R arginine 6.4 35 2 S serine 6.2 34 2 T threonine 5.9 32 2 V valine 7.9 43 2 W tryptophan 1.1 6 1 Y tyrosine 1.8 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CAP-GLY domain containing linker protein 3 CLIP4 0.430 CAP-GLY domain containing linker protein family, mem... CLIP1 0.135 restin isoform b CLIP1 0.135 restin isoform a CLIP2 0.133 CAP-GLY domain containing linker protein 2 isoform ... CLIP2 0.133 CAP-GLY domain containing linker protein 2 isoform 2... CEP350 0.059 centrosome-associated protein 350 KIF13B 0.048 kinesin family member 13B DCTN1 0.047 dynactin 1 isoform 3 DCTN1 0.046 dynactin 1 isoform 1 TBCB 0.041 cytoskeleton associated protein 1 TBCE 0.023 beta-tubulin cofactor E TBCE 0.023 beta-tubulin cofactor E EHMT2 0.022 euchromatic histone-lysine N-methyltransferase 2 is... EHMT2 0.022 euchromatic histone-lysine N-methyltransferase 2 is... NFKBIZ 0.020 nuclear factor of kappa light polypeptide gene enhan... NFKBIZ 0.020 nuclear factor of kappa light polypeptide gene enhan... ANKRD12 0.019 ankyrin repeat domain 12 isoform 2 ANKRD12 0.019 ankyrin repeat domain 12 isoform 1 ANKRD11 0.019 ankyrin repeat domain 11 PPP1R12B 0.018 protein phosphatase 1, regulatory (inhibitor) subuni... PPP1R12B 0.018 protein phosphatase 1, regulatory (inhibitor) subunit... ANKRD28 0.018 ankyrin repeat domain 28 TNKS2 0.018 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... TNKS 0.017 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... PPP1R12C 0.017 protein phosphatase 1, regulatory subunit 12C CYLD 0.016 ubiquitin carboxyl-terminal hydrolase CYLD isoform ... CYLD 0.016 ubiquitin carboxyl-terminal hydrolase CYLD isoform 1... CYLD 0.016 ubiquitin carboxyl-terminal hydrolase CYLD isoform ... ANK2 0.016 ankyrin 2 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.