Guide to the Human Genome
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Name: SPRYD3 Sequence: fasta or formatted (442aa) NCBI GI: 14249554
Description:

SPRY domain containing 3

Referenced in:

Ran and Rag

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         18           1
 C cysteine            2.0          9           1
 D aspartate           7.7         34           2
 E glutamate           7.9         35          11
 F phenylalanine       4.1         18           2
 G glycine            11.1         49           2
 H histidine           3.6         16           1
 I isoleucine          4.8         21           2
 K lysine              4.8         21           2
 L leucine             6.8         30           2
 M methionine          2.7         12           2
 N asparagine          2.9         13           1
 P proline             4.8         21           1
 Q glutamine           1.8          8           1
 R arginine            8.1         36           3
 S serine              6.6         29           1
 T threonine           2.9         13           1
 V valine              8.4         37           3
 W tryptophan          0.9          4           1
 Y tyrosine            4.1         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SPRY domain containing 3 
RANBP9                0.067   RAN binding protein 9 
RANBP10               0.067   RAN binding protein 10 
PPARGC1B              0.018   peroxisome proliferator-activated receptor gamma, co...
MYT1                  0.017   myelin transcription factor 1 
ACIN1                 0.016   apoptotic chromatin condensation inducer 1 
CHGA                  0.016   chromogranin A precursor 
CENPB                 0.015   centromere protein B 
EHMT2                 0.015   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.015   euchromatic histone-lysine N-methyltransferase 2 is...
TTBK1                 0.015   tau tubulin kinase 1 
MYST4                 0.015   MYST histone acetyltransferase (monocytic leukemia)...
CLSTN1                0.015   calsyntenin 1 isoform 1 
CLSTN1                0.015   calsyntenin 1 isoform 2 
RANGAP1               0.013   Ran GTPase activating protein 1 
DCAF8L2               0.013   DDB1 and CUL4 associated factor 8-like 2 
BAZ1B                 0.013   bromodomain adjacent to zinc finger domain, 1B [Homo...
SHROOM4               0.013   shroom family member 4 
PRG2                  0.013   plasticity-related protein 2 
SCAF1                 0.012   SR-related CTD-associated factor 1 
ZFHX3                 0.012   AT-binding transcription factor 1 
CHIC1                 0.012   cysteine-rich hydrophobic domain 1 
C1orf107              0.012   digestive-organ expansion factor homolog 
LOC100289089          0.012   PREDICTED: hypothetical protein XP_002343359 
BPTF                  0.012   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.012   bromodomain PHD finger transcription factor isoform ...
PELP1                 0.012   proline, glutamic acid and leucine rich protein 1 [...
RPGR                  0.012   retinitis pigmentosa GTPase regulator isoform C [Hom...
PRDM2                 0.012   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.012   retinoblastoma protein-binding zinc finger protein i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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