Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ANKRD6 Sequence: fasta or formatted (722aa) NCBI GI: 55742857
Description:

ankyrin repeat domain 6

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2         81           3
 C cysteine            2.1         15           1
 D aspartate           4.3         31           2
 E glutamate           6.9         50           3
 F phenylalanine       1.1          8           2
 G glycine             5.1         37           1
 H histidine           3.7         27           1
 I isoleucine          2.4         17           2
 K lysine              7.6         55           2
 L leucine             9.8         71           3
 M methionine          1.2          9           1
 N asparagine          4.7         34           2
 P proline             4.7         34           4
 Q glutamine           7.2         52           2
 R arginine            7.2         52           3
 S serine              7.2         52           3
 T threonine           6.1         44           2
 V valine              5.8         42           2
 W tryptophan          0.4          3           1
 Y tyrosine            1.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 6 
ANK2                  0.081   ankyrin 2 isoform 3 
ANK2                  0.081   ankyrin 2 isoform 2 
ANK2                  0.081   ankyrin 2 isoform 1 
ANKDD1A               0.080   ankyrin repeat and death domain containing 1A 
ANK1                  0.080   ankyrin 1 isoform 9 
ANK1                  0.080   ankyrin 1 isoform 1 
ANK1                  0.080   ankyrin 1 isoform 3 
ANK1                  0.080   ankyrin 1 isoform 2 
ANK1                  0.080   ankyrin 1 isoform 4 
ANK3                  0.077   ankyrin 3 isoform 1 
KIDINS220             0.074   kinase D-interacting substrate of 220 kDa 
DAPK1                 0.074   death-associated protein kinase 1 
ANKRD44               0.073   ankyrin repeat domain 44 
EHMT1                 0.070   euchromatic histone-lysine N-methyltransferase 1 is...
ANKRD50               0.069   ankyrin repeat domain 50 
ANKRD29               0.068   ankyrin repeat domain 29 
ANKRD28               0.067   ankyrin repeat domain 28 
ANKRD52               0.066   ankyrin repeat domain 52 
ANKRD17               0.066   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.066   ankyrin repeat domain protein 17 isoform b 
ANKK1                 0.066   ankyrin repeat and kinase domain containing 1 
EHMT2                 0.066   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.066   euchromatic histone-lysine N-methyltransferase 2 is...
RIPK4                 0.064   ankyrin repeat domain 3 
ANKHD1                0.063   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.063   ANKHD1-EIF4EBP3 protein 
MIB1                  0.062   mindbomb homolog 1 
ANKHD1                0.062   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.062   ankyrin repeat and KH domain containing 1 isoform 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press