Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PPP1R16B Sequence: fasta or formatted (567aa) NCBI GI: 28626517
Description:

protein phosphatase 1 regulatory inhibitor subunit 16B

Referenced in:

Ankyrin Family
Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         52           3
 C cysteine            1.8         10           2
 D aspartate           5.8         33           1
 E glutamate           8.3         47           4
 F phenylalanine       1.4          8           1
 G glycine             5.8         33           2
 H histidine           3.4         19           1
 I isoleucine          3.5         20           1
 K lysine              6.0         34           2
 L leucine            11.3         64           3
 M methionine          2.6         15           1
 N asparagine          3.5         20           1
 P proline             4.6         26           2
 Q glutamine           4.4         25           2
 R arginine            6.3         36           2
 S serine              7.4         42           3
 T threonine           4.6         26           1
 V valine              5.5         31           2
 W tryptophan          1.6          9           1
 Y tyrosine            3.0         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1 regulatory inhibitor subunit 1... 
PPP1R16A              0.402   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.155   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.155   protein phosphatase 1, regulatory (inhibitor) subunit...
PPP1R12A              0.147   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.147   protein phosphatase 1, regulatory (inhibitor) subunit...
PPP1R12C              0.146   protein phosphatase 1, regulatory subunit 12C 
MYO16                 0.119   myosin heavy chain Myr 8 
PPP1R12A              0.105   protein phosphatase 1, regulatory (inhibitor) subun...
ANK1                  0.078   ankyrin 1 isoform 9 
TNKS2                 0.078   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANK3                  0.077   ankyrin 3 isoform 1 
TNKS                  0.076   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANK1                  0.070   ankyrin 1 isoform 1 
ANK1                  0.070   ankyrin 1 isoform 3 
ANK1                  0.070   ankyrin 1 isoform 2 
ANK1                  0.070   ankyrin 1 isoform 4 
ANKRD28               0.069   ankyrin repeat domain 28 
ANK2                  0.067   ankyrin 2 isoform 2 
ANK2                  0.067   ankyrin 2 isoform 1 
ANKRD50               0.067   ankyrin repeat domain 50 
ANK2                  0.067   ankyrin 2 isoform 3 
ANKK1                 0.064   ankyrin repeat and kinase domain containing 1 
DAPK1                 0.061   death-associated protein kinase 1 
RIPK4                 0.061   ankyrin repeat domain 3 
ANKRD44               0.059   ankyrin repeat domain 44 
PSMD10                0.059   proteasome 26S non-ATPase subunit 10 isoform 1 
TP53BP2               0.057   tumor protein p53 binding protein, 2 isoform 1 [Hom...
TP53BP2               0.057   tumor protein p53 binding protein, 2 isoform 2 
ANKRD52               0.056   ankyrin repeat domain 52 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press