Guide to the Human Genome
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Name: DYSFIP1 Sequence: fasta or formatted (154aa) NCBI GI: 56090539
Description:

dysferlin-interacting protein 1

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         13           2
 C cysteine            1.3          2           1
 D aspartate          11.0         17           2
 E glutamate           3.9          6           1
 F phenylalanine       2.6          4           1
 G glycine             6.5         10           1
 H histidine           3.2          5           1
 I isoleucine          5.2          8           1
 K lysine              3.2          5           1
 L leucine            11.7         18           2
 M methionine          1.9          3           1
 N asparagine          1.9          3           1
 P proline             5.2          8           1
 Q glutamine           2.6          4           1
 R arginine           11.0         17           4
 S serine              5.8          9           1
 T threonine           4.5          7           2
 V valine              5.2          8           1
 W tryptophan          0.6          1           1
 Y tyrosine            3.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dysferlin-interacting protein 1 
PPP1R12C              0.260   protein phosphatase 1, regulatory subunit 12C 
PPP1R12B              0.246   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.246   protein phosphatase 1, regulatory (inhibitor) subunit...
PPP1R12A              0.221   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.221   protein phosphatase 1, regulatory (inhibitor) subunit...
PPP1R16B              0.190   protein phosphatase 1 regulatory inhibitor subunit 1...
PPP1R16A              0.180   protein phosphatase 1, regulatory (inhibitor) subuni...
NRARP                 0.163   NOTCH-regulated ankyrin repeat protein 
ANKRD12               0.156   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.156   ankyrin repeat domain 12 isoform 1 
PPP1R12A              0.138   protein phosphatase 1, regulatory (inhibitor) subun...
ANKRD31               0.138   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.138   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.138   PREDICTED: ankyrin repeat domain 31 
PSMD10                0.135   proteasome 26S non-ATPase subunit 10 isoform 1 
PSMD10                0.135   proteasome 26S non-ATPase subunit 10 isform 2 
ANKRD11               0.135   ankyrin repeat domain 11 
TP53BP2               0.131   tumor protein p53 binding protein, 2 isoform 1 [Hom...
TP53BP2               0.131   tumor protein p53 binding protein, 2 isoform 2 
ANK2                  0.131   ankyrin 2 isoform 3 
ANK2                  0.131   ankyrin 2 isoform 2 
ANK2                  0.131   ankyrin 2 isoform 1 
ANKRD28               0.128   ankyrin repeat domain 28 
ANK1                  0.128   ankyrin 1 isoform 9 
ANK1                  0.128   ankyrin 1 isoform 1 
ANK1                  0.128   ankyrin 1 isoform 3 
ANK1                  0.128   ankyrin 1 isoform 2 
ANK1                  0.128   ankyrin 1 isoform 4 
TNNI3K                0.128   TNNI3 interacting kinase isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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