Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: THAP10 Sequence: fasta or formatted (257aa) NCBI GI: 9910354
Description:

THAP domain containing 10

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         25           3
 C cysteine            3.9         10           1
 D aspartate           5.8         15           1
 E glutamate           5.4         14           2
 F phenylalanine       3.1          8           1
 G glycine             5.8         15           2
 H histidine           3.1          8           1
 I isoleucine          2.7          7           1
 K lysine              5.1         13           1
 L leucine             5.8         15           2
 M methionine          0.8          2           1
 N asparagine          2.7          7           1
 P proline             5.8         15           1
 Q glutamine           5.1         13           1
 R arginine            8.9         23           1
 S serine              9.3         24           2
 T threonine           7.0         18           2
 V valine              7.0         18           1
 W tryptophan          1.6          4           1
 Y tyrosine            1.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   THAP domain containing 10 
THAP2                 0.042   THAP domain containing, apoptosis associated protein...
THAP3                 0.038   THAP domain containing, apoptosis associated protein...
THAP7                 0.024   THAP domain containing 7 isoform 2 
THAP7                 0.024   THAP domain containing 7 isoform 1 
THAP5                 0.020   THAP domain containing 5 isoform 1 
SDC1                  0.016   syndecan 1 precursor 
SDC1                  0.016   syndecan 1 precursor 
THAP8                 0.014   THAP domain containing 8 
MARCKS                0.012   myristoylated alanine-rich protein kinase C substra...
SLC38A10              0.012   solute carrier family 38, member 10 isoform a 
ZNF574                0.012   zinc finger protein 574 
C11orf48              0.012   hypothetical protein LOC79081 
FARP1                 0.010   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
ATXN2                 0.010   ataxin 2 
GLI1                  0.010   GLI family zinc finger 1 isoform 1 
THAP1                 0.010   THAP domain containing, apoptosis associated protein ...
LOC441617             0.010   PREDICTED: similar to hCG1820409 
LOC441617             0.010   PREDICTED: similar to hCG1820409 
AHCYL2                0.008   S-adenosylhomocysteine hydrolase-like 2 isoform b [...
AHCYL2                0.008   S-adenosylhomocysteine hydrolase-like 2 isoform a [H...
THAP11                0.008   THAP domain containing 11 
ARHGAP17              0.008   nadrin isoform 1 
ARHGAP17              0.008   nadrin isoform 2 
SMG7                  0.008   SMG-7 homolog isoform 1 
SMG7                  0.008   SMG-7 homolog isoform 4 
SMG7                  0.008   SMG-7 homolog isoform 2 
IKZF2                 0.008   helios isoform 1 
IKZF2                 0.008   helios isoform 2 
LOC100288691          0.008   PREDICTED: similar to hCG2040565 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press