PAPD5 37494

Name: PAPD5	Sequence: fasta or formatted (442aa)		NCBI GI: 94536832
Description: PAP associated domain containing 5 isoform b		Referenced in: DNA Polymerases Polyadenylation
Other entries for this name: alt prot [489aa] PAP associated domain containing 5 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 20 2 C cysteine 1.1 5 1 D aspartate 5.9 26 1 E glutamate 5.0 22 3 F phenylalanine 3.6 16 2 G glycine 6.3 28 2 H histidine 2.0 9 1 I isoleucine 4.3 19 2 K lysine 7.5 33 2 L leucine 8.8 39 2 M methionine 2.0 9 1 N asparagine 4.8 21 2 P proline 5.0 22 1 Q glutamine 5.0 22 1 R arginine 5.0 22 1 S serine 10.4 46 4 T threonine 5.9 26 2 V valine 7.7 34 2 W tryptophan 1.1 5 1 Y tyrosine 4.1 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PAP associated domain containing 5 isoform b PAPD5 0.975 PAP associated domain containing 5 isoform a POLS 0.529 DNA polymerase sigma ZCCHC6 0.043 zinc finger, CCHC domain containing 6 PAPD4 0.039 PAP associated domain containing 4 PAPD4 0.039 PAP associated domain containing 4 PAPD4 0.039 PAP associated domain containing 4 ZCCHC11 0.027 zinc finger, CCHC domain containing 11 isoform a [Ho... ZCCHC11 0.027 zinc finger, CCHC domain containing 11 isoform b [Ho... ZCCHC11 0.027 zinc finger, CCHC domain containing 11 isoform c [Ho... TNRC18 0.012 trinucleotide repeat containing 18 SP1 0.012 Sp1 transcription factor isoform a SP1 0.012 Sp1 transcription factor isoform b PNN 0.012 pinin, desmosome associated protein AFF4 0.012 ALL1 fused gene from 5q31 DSPP 0.009 dentin sialophosphoprotein preproprotein SS18L1 0.009 SS18-like protein 1 KIAA0913 0.009 hypothetical protein LOC23053 TGOLN2 0.009 trans-golgi network protein 2 PACRGL 0.009 PARK2 co-regulated-like isoform 1 MUC21 0.009 mucin 21 PRPF40A 0.009 formin binding protein 3 KIAA1853 0.009 KIAA1853 protein SRRM2 0.009 splicing coactivator subunit SRm300 MUC17 0.008 mucin 17 KCNN2 0.008 small conductance calcium-activated potassium channe... SHANK2 0.008 SH3 and multiple ankyrin repeat domains 2 isoform 1... AFF3 0.008 AF4/FMR2 family, member 3 isoform 2 AFF3 0.008 AF4/FMR2 family, member 3 isoform 1 GPATCH8 0.008 G patch domain containing 8 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.