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Search of human proteins with 93102401
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|93102401 hypothetical protein LOC84326 isoform g [Homo
sapiens]
(185 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|93102401 hypothetical protein LOC84326 isoform g [Homo sapiens] 394 e-110
gi|93102391 hypothetical protein LOC84326 isoform b [Homo sapiens] 382 e-107
gi|93102387 hypothetical protein LOC84326 isoform a [Homo sapiens] 250 4e-67
gi|93102395 hypothetical protein LOC84326 isoform d [Homo sapiens] 134 4e-32
gi|93102393 hypothetical protein LOC84326 isoform c [Homo sapiens] 134 4e-32
gi|52630419 sterol regulatory element binding transcription fact... 34 0.082
gi|22547195 sterol regulatory element binding transcription fact... 34 0.082
gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo ... 33 0.11
gi|118572599 formin homology 2 domain containing 1 [Homo sapiens] 33 0.18
gi|61966923 forkhead box B2 [Homo sapiens] 32 0.31
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi... 32 0.41
gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens] 32 0.41
gi|150418009 transforming, acidic coiled-coil containing protein... 32 0.41
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi... 32 0.41
gi|209413756 synapsin III isoform IIIg [Homo sapiens] 31 0.53
gi|209413752 synapsin III isoform IIIa [Homo sapiens] 31 0.53
gi|4758316 ets variant gene 5 (ets-related molecule) [Homo sapiens] 31 0.53
gi|30795225 cell cycle exit and neuronal differentiation 1 [Homo... 31 0.53
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens] 31 0.69
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ... 31 0.69
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ... 31 0.69
gi|148839294 Ca2+-dependent activator protein for secretion 2 is... 31 0.69
gi|148839284 Ca2+-dependent activator protein for secretion 2 is... 31 0.69
gi|55743096 collagen, type XIV, alpha 1 [Homo sapiens] 31 0.69
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 30 0.91
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 30 1.5
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 29 2.0
gi|25777598 diacylglycerol kinase, delta 130kDa isoform 2 [Homo ... 29 2.0
gi|168229174 RNA binding motif protein 27 [Homo sapiens] 29 2.0
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 29 2.0
>gi|93102401 hypothetical protein LOC84326 isoform g [Homo sapiens]
Length = 185
Score = 394 bits (1012), Expect = e-110
Identities = 185/185 (100%), Positives = 185/185 (100%)
Query: 1 MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD
Sbjct: 1 MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
Query: 61 QRCLDSIAATTQAQGLTNVKAPLHLDVTWGWEHWGGILPQSLDLLLCINMAHVSPLRCTE 120
QRCLDSIAATTQAQGLTNVKAPLHLDVTWGWEHWGGILPQSLDLLLCINMAHVSPLRCTE
Sbjct: 61 QRCLDSIAATTQAQGLTNVKAPLHLDVTWGWEHWGGILPQSLDLLLCINMAHVSPLRCTE 120
Query: 121 EPRMGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEKLSPSFTPAHLHPCRRLCEA 180
EPRMGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEKLSPSFTPAHLHPCRRLCEA
Sbjct: 121 EPRMGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEKLSPSFTPAHLHPCRRLCEA 180
Query: 181 RTLPP 185
RTLPP
Sbjct: 181 RTLPP 185
>gi|93102391 hypothetical protein LOC84326 isoform b [Homo sapiens]
Length = 205
Score = 382 bits (981), Expect = e-107
Identities = 185/205 (90%), Positives = 185/205 (90%), Gaps = 20/205 (9%)
Query: 1 MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD
Sbjct: 1 MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
Query: 61 QRCLDSIAATTQAQGLTNVKAPLHLDVTWGWEHWGGILPQSLDLLLCINMAHVSPLRCTE 120
QRCLDSIAATTQAQGLTNVKAPLHLDVTWGWEHWGGILPQSLDLLLCINMAHVSPLRCTE
Sbjct: 61 QRCLDSIAATTQAQGLTNVKAPLHLDVTWGWEHWGGILPQSLDLLLCINMAHVSPLRCTE 120
Query: 121 --------------------EPRMGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPE 160
EPRMGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPE
Sbjct: 121 GLFRAAGHLLKPRALLITYGEPRMGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPE 180
Query: 161 KLSPSFTPAHLHPCRRLCEARTLPP 185
KLSPSFTPAHLHPCRRLCEARTLPP
Sbjct: 181 KLSPSFTPAHLHPCRRLCEARTLPP 205
>gi|93102387 hypothetical protein LOC84326 isoform a [Homo sapiens]
Length = 204
Score = 250 bits (639), Expect = 4e-67
Identities = 123/129 (95%), Positives = 124/129 (96%), Gaps = 1/129 (0%)
Query: 1 MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD
Sbjct: 1 MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
Query: 61 QRCLDSIAATTQAQGLTNVKAPLHLDVTWGWEHWGGILPQSLDLLLCINMAHVSPLRCTE 120
QRCLDSIAATTQAQGLTNVKAPLHLDVTWGWEHWGGILPQSLDLLLCINMAHVSPLRCT
Sbjct: 61 QRCLDSIAATTQAQGLTNVKAPLHLDVTWGWEHWGGILPQSLDLLLCINMAHVSPLRCT- 119
Query: 121 EPRMGASGH 129
E A+GH
Sbjct: 120 EGLFRAAGH 128
>gi|93102395 hypothetical protein LOC84326 isoform d [Homo
sapiens]
Length = 127
Score = 134 bits (337), Expect = 4e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Query: 1 MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD
Sbjct: 1 MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
Query: 61 QRCLD 65
QRCLD
Sbjct: 61 QRCLD 65
>gi|93102393 hypothetical protein LOC84326 isoform c [Homo
sapiens]
Length = 107
Score = 134 bits (337), Expect = 4e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Query: 1 MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD
Sbjct: 1 MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
Query: 61 QRCLD 65
QRCLD
Sbjct: 61 QRCLD 65
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 33.9 bits (76), Expect = 0.082
Identities = 34/124 (27%), Positives = 49/124 (39%), Gaps = 18/124 (14%)
Query: 50 PLAEWQPSDVDQRCLDSIAATTQAQGLTNVKAPLHLDVTWGWEHW-GGILPQSLDLLLCI 108
PL+ QP+ + S+ A + G+ PL + T + G +LPQS
Sbjct: 126 PLSPPQPAPTPLKMYPSMPAFSPGPGIKEESVPLSILQTPTPQPLPGALLPQSFPA---- 181
Query: 109 NMAHVSPLRCTEEPRMGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEKLSPSFTP 168
+P + + P +G SPPGG G P +QQ +P LP P P
Sbjct: 182 ----PAPPQFSSTPVLGYP--SPPGGFSTGSPPGN-------TQQPLPGLPLASPPGVPP 228
Query: 169 AHLH 172
LH
Sbjct: 229 VSLH 232
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 33.9 bits (76), Expect = 0.082
Identities = 34/124 (27%), Positives = 49/124 (39%), Gaps = 18/124 (14%)
Query: 50 PLAEWQPSDVDQRCLDSIAATTQAQGLTNVKAPLHLDVTWGWEHW-GGILPQSLDLLLCI 108
PL+ QP+ + S+ A + G+ PL + T + G +LPQS
Sbjct: 96 PLSPPQPAPTPLKMYPSMPAFSPGPGIKEESVPLSILQTPTPQPLPGALLPQSFPA---- 151
Query: 109 NMAHVSPLRCTEEPRMGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEKLSPSFTP 168
+P + + P +G SPPGG G P +QQ +P LP P P
Sbjct: 152 ----PAPPQFSSTPVLGYP--SPPGGFSTGSPPGN-------TQQPLPGLPLASPPGVPP 198
Query: 169 AHLH 172
LH
Sbjct: 199 VSLH 202
>gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo
sapiens]
Length = 963
Score = 33.5 bits (75), Expect = 0.11
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 126 ASGHSPPGGPGKGQWPAP 143
ASG +PPGGPG G+ PAP
Sbjct: 81 ASGSAPPGGPGPGRTPAP 98
>gi|118572599 formin homology 2 domain containing 1 [Homo sapiens]
Length = 1164
Score = 32.7 bits (73), Expect = 0.18
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 143 PGEDGGHASQQQMPDLPEKLSPSFTPAHLHPCRRLCEARTLPP 185
P E GGH +Q+ D PE + TP PC L R+L P
Sbjct: 471 PNEAGGHPDARQLWDSPETAPAARTPQSPAPCVLLRAQRSLAP 513
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 32.0 bits (71), Expect = 0.31
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 93 HWGGILPQSLDLLLCINMAHVSPLRCTEEPRMGASGHSPPGGPGKGQWPAPGEDGGHASQ 152
H G +P L ++ HV + A+ P GP G + P + H++
Sbjct: 297 HLGYPVPGQLGNVVSSVWPHVGVMDSVAAAAAAAAAAGVPVGPEYGAFGVPVKSLCHSAS 356
Query: 153 QQMPDLPEKLSPSFTPAHLHPCRRLCEARTLP 184
Q +P +P + P TPA L P L T+P
Sbjct: 357 QSLPAMPVPIKP--TPA-LPPVSALQPGLTVP 385
>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
sapiens]
Length = 678
Score = 31.6 bits (70), Expect = 0.41
Identities = 17/58 (29%), Positives = 22/58 (37%)
Query: 121 EPRMGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEKLSPSFTPAHLHPCRRLC 178
EPR G + PG GQW E G + +P+ PA P +R C
Sbjct: 168 EPRAGPANRLAGSPPGSGQWKPKVESGDPSLHPPPSPGTPSATPASPPASATPSQRQC 225
>gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens]
Length = 540
Score = 31.6 bits (70), Expect = 0.41
Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 9/90 (10%)
Query: 67 IAATTQAQGLTNVKAPLHLDVTWGWEHWGGILPQSLDLLLCINMAHVSPLRCTEEP---- 122
+AA + + L P W H +L + LD L I A +P C P
Sbjct: 65 VAALEEERELLRRAGPPGALDAWAEPHLERLLREKLDGLAKIRTAREAPSECVCPPGPPG 124
Query: 123 RMGASGH----SPPGGPGKGQWPAP-GEDG 147
R G G PPG G+ +P P G DG
Sbjct: 125 RRGKPGRRGDPGPPGQSGRDGYPGPLGLDG 154
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 31.6 bits (70), Expect = 0.41
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 124 MGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEKLSPSFTP 168
+G+ G P G PG+ P+P E G H + +Q ++ + P P
Sbjct: 475 LGSKGEHPEGDPGEVPAPSPQERGEHLNTEQSHEVQPGVPPPPLP 519
>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
sapiens]
Length = 650
Score = 31.6 bits (70), Expect = 0.41
Identities = 17/58 (29%), Positives = 22/58 (37%)
Query: 121 EPRMGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEKLSPSFTPAHLHPCRRLC 178
EPR G + PG GQW E G + +P+ PA P +R C
Sbjct: 168 EPRAGPANRLAGSPPGSGQWKPKVESGDPSLHPPPSPGTPSATPASPPASATPSQRQC 225
>gi|209413756 synapsin III isoform IIIg [Homo sapiens]
Length = 579
Score = 31.2 bits (69), Expect = 0.53
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 114 SPLRCTEEPRMGASGHSPP--GGPGKGQWPAPGEDGGHASQQQMPDLPEKLSP 164
SP + P++G PP GGP + Q P P G + Q+ P + LSP
Sbjct: 418 SPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSP 470
>gi|209413752 synapsin III isoform IIIa [Homo sapiens]
Length = 580
Score = 31.2 bits (69), Expect = 0.53
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 114 SPLRCTEEPRMGASGHSPP--GGPGKGQWPAPGEDGGHASQQQMPDLPEKLSP 164
SP + P++G PP GGP + Q P P G + Q+ P + LSP
Sbjct: 419 SPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSP 471
>gi|4758316 ets variant gene 5 (ets-related molecule) [Homo sapiens]
Length = 510
Score = 31.2 bits (69), Expect = 0.53
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 108 INMAHVSPLRCTEEPRMGASGHSPPGGPGKGQWPAPG-----EDGGHASQQQMPDLPEK- 161
++ H +PL + + SGH+P GP +G PAP E G +P P +
Sbjct: 141 LSPTHQNPLFPPPQATLPTSGHAPAAGPVQGVGPAPAPHSLPEPGPQQQTFAVPRPPHQP 200
Query: 162 -LSPSFTPAHLHPCRRLCEARTLPP 185
P P + +P + + + P
Sbjct: 201 LQMPKMMPENQYPSEQRFQRQLSEP 225
>gi|30795225 cell cycle exit and neuronal differentiation 1 [Homo
sapiens]
Length = 149
Score = 31.2 bits (69), Expect = 0.53
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 114 SPLRCTEEPRMGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLP-----EKLSPSFTP 168
SP T+ P++ PP GK P + A +QQ P P +K S P
Sbjct: 10 SPKPDTKVPQVTTEAKVPPAADGKAPLTKPSKKEAPAEKQQPPAAPTTAPAKKTSAKADP 69
Query: 169 AHLHPCRRLCEARTLP 184
A L+ L A T+P
Sbjct: 70 ALLNNHSNLKPAPTVP 85
>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 30.8 bits (68), Expect = 0.69
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 9/42 (21%)
Query: 111 AHVSPL--------RCTEEPRMGASGHSPPGGPGKGQWPAPG 144
+HV+P R E P +G GH PGG G G W PG
Sbjct: 184 SHVAPAGARPARGARAAEHPAVGGRGHG-PGGHGCGGWRWPG 224
>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
sapiens]
Length = 446
Score = 30.8 bits (68), Expect = 0.69
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 9/42 (21%)
Query: 111 AHVSPL--------RCTEEPRMGASGHSPPGGPGKGQWPAPG 144
+HV+P R E P +G GH PGG G G W PG
Sbjct: 333 SHVAPAGARPARGARAAEHPAVGGRGHG-PGGHGCGGWRWPG 373
>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
sapiens]
Length = 446
Score = 30.8 bits (68), Expect = 0.69
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 9/42 (21%)
Query: 111 AHVSPL--------RCTEEPRMGASGHSPPGGPGKGQWPAPG 144
+HV+P R E P +G GH PGG G G W PG
Sbjct: 333 SHVAPAGARPARGARAAEHPAVGGRGHG-PGGHGCGGWRWPG 373
>gi|148839294 Ca2+-dependent activator protein for secretion 2
isoform a [Homo sapiens]
Length = 1296
Score = 30.8 bits (68), Expect = 0.69
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 96 GILPQSLDLLLCINMAHVSPLRCTEEPRMGASGHSPPGGPGKGQWPAPG--EDGGHASQQ 153
G+ +S D+L+ + +P T E R A G + GG + P+P +G Q+
Sbjct: 14 GLEEESRDVLVAAGSSQRAPPAPTREGRRDAPGRAGGGGAARSVSPSPSVLSEGRDEPQR 73
Query: 154 QMPDLPEK 161
Q+ D E+
Sbjct: 74 QLDDEQER 81
Score = 27.3 bits (59), Expect = 7.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 125 GASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEKLS 163
G+S +PP +G+ APG GG + + + P LS
Sbjct: 27 GSSQRAPPAPTREGRRDAPGRAGGGGAARSVSPSPSVLS 65
>gi|148839284 Ca2+-dependent activator protein for secretion 2
isoform b [Homo sapiens]
Length = 1255
Score = 30.8 bits (68), Expect = 0.69
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 96 GILPQSLDLLLCINMAHVSPLRCTEEPRMGASGHSPPGGPGKGQWPAPG--EDGGHASQQ 153
G+ +S D+L+ + +P T E R A G + GG + P+P +G Q+
Sbjct: 14 GLEEESRDVLVAAGSSQRAPPAPTREGRRDAPGRAGGGGAARSVSPSPSVLSEGRDEPQR 73
Query: 154 QMPDLPEK 161
Q+ D E+
Sbjct: 74 QLDDEQER 81
Score = 27.3 bits (59), Expect = 7.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 125 GASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEKLS 163
G+S +PP +G+ APG GG + + + P LS
Sbjct: 27 GSSQRAPPAPTREGRRDAPGRAGGGGAARSVSPSPSVLS 65
>gi|55743096 collagen, type XIV, alpha 1 [Homo sapiens]
Length = 1796
Score = 30.8 bits (68), Expect = 0.69
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 98 LPQSLDLLLCINMAHVSPLRCTEEPRMGASGHSPPGGPG----KGQWPAPGEDG 147
LP D C ++ H T E +G +G PPGGPG KGQ PG G
Sbjct: 1435 LPGLRDDESCPDLPHSCSCSETNEVALGPAG--PPGGPGLRGPKGQQGEPGPKG 1486
Score = 28.5 bits (62), Expect = 3.4
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Query: 125 GASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEKLSPSFTPAHLHP 173
G SG S PG PG P P GH +P PS P + P
Sbjct: 1719 GPSGESRPGSPGPPGSPGPRGPPGHLG------VPGPQGPSGQPGYCDP 1761
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 30.4 bits (67), Expect = 0.91
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 125 GASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEK-LSPSFTPAHLHPCRRLCEARTL 183
GA G G G A G DGG A + PD PE P+ PA L +
Sbjct: 73 GAGDTDEEGAAGDGAAAAGGADGGAAPEPVPPDGPEAGAPPTLAPAVAPGSLPLLDPNAS 132
Query: 184 PP 185
PP
Sbjct: 133 PP 134
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 29.6 bits (65), Expect = 1.5
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 123 RMGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEKLSPSFTPAH 170
+ GA G PP PG+G P G+ G + P + S P H
Sbjct: 936 QQGAQGRIPPLNPGQGPGPNKGDSRGPPNHHMGPMSERRHEQSGGPEH 983
>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
Length = 1894
Score = 29.3 bits (64), Expect = 2.0
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 128 GHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEKLSPSFTPAHLHP 173
GHSP PG A A QQ P +P +++P P P
Sbjct: 962 GHSPKAQPGSTDRHASPARPPAARSQQHPSVPRRMTPGRAPQQQPP 1007
>gi|25777598 diacylglycerol kinase, delta 130kDa isoform 2 [Homo
sapiens]
Length = 1214
Score = 29.3 bits (64), Expect = 2.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 124 MGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPEKL 162
M A+ +PP GP + P P E+ + + P P+KL
Sbjct: 1 MAAAAGAPPPGPPQPPPPPPPEESSDSEPEAEPGSPQKL 39
>gi|168229174 RNA binding motif protein 27 [Homo sapiens]
Length = 1060
Score = 29.3 bits (64), Expect = 2.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 128 GHSPPGGPGKGQWPAPGEDGGHASQQQMP 156
G P GPG G P PG GH+ + +P
Sbjct: 338 GPGPGPGPGPGPGPGPGPGPGHSMRLPVP 366
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 29.3 bits (64), Expect = 2.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 122 PRMGASGHSPPGGPGKGQWPAPGEDGGHASQQQMP 156
P+ G H PP PGK + P P GG+ SQ P
Sbjct: 125 PQGGNQSHRPPPPPGKPERPPP--QGGNQSQGPPP 157
Score = 28.1 bits (61), Expect = 4.5
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 122 PRMGASGHSPPGGPGKGQWPAPGEDGGHASQQQMPDLPE 160
P+ G PP PGK + P P E S + P P+
Sbjct: 146 PQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQ 184
Score = 27.3 bits (59), Expect = 7.7
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 122 PRMGASGHSPPGGPGKGQWPAPGEDGGHASQ--QQMPDLPEKLSP 164
P+ G PP PGK + P P GG+ SQ P PE+ P
Sbjct: 83 PQGGNQSQGPPPHPGKPERPPP--QGGNQSQGTPPPPGKPERPPP 125
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,061,555
Number of Sequences: 37866
Number of extensions: 505758
Number of successful extensions: 2671
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 2504
Number of HSP's gapped (non-prelim): 194
length of query: 185
length of database: 18,247,518
effective HSP length: 96
effective length of query: 89
effective length of database: 14,612,382
effective search space: 1300501998
effective search space used: 1300501998
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.