Guide to the Human Genome
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Name: CADPS2 Sequence: fasta or formatted (1255aa) NCBI GI: 148839284
Description:

Ca2+-dependent activator protein for secretion 2 isoform b

Referenced in:

Neurons

Other entries for this name:
alt prot [1296aa] Ca2+-dependent activator protein for secretion 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         89           3
 C cysteine            1.8         22           1
 D aspartate           5.8         73           2
 E glutamate           8.6        108           4
 F phenylalanine       4.5         56           2
 G glycine             4.9         62           4
 H histidine           2.4         30           2
 I isoleucine          4.1         52           2
 K lysine              6.8         85           2
 L leucine            10.8        136           2
 M methionine          2.6         33           1
 N asparagine          3.0         38           2
 P proline             3.7         46           2
 Q glutamine           6.0         75           2
 R arginine            5.7         72           2
 S serine              7.1         89           3
 T threonine           4.1         52           3
 V valine              6.5         82           2
 W tryptophan          1.3         16           2
 Y tyrosine            3.1         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ca2+-dependent activator protein for secretion 2 is... 
CADPS2                0.978   Ca2+-dependent activator protein for secretion 2 is...
CADPS                 0.789   Ca2+-dependent secretion activator isoform 2 
CADPS                 0.781   Ca2+-dependent secretion activator isoform 1 
CADPS                 0.778   Ca2+-dependent secretion activator isoform 3 
UNC13A                0.016   unc-13 homolog A 
UNC13C                0.013   unc-13 homolog C 
UNC13B                0.013   UNC13 (C. elegans)-like 
MYH8                  0.008   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH2                  0.006   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.006   myosin, heavy chain 2, skeletal muscle, adult [Homo...
CEP135                0.006   centrosome protein 4 
MLXIPL                0.005   Williams Beuren syndrome chromosome region 14 isofor...
GOLGA5                0.005   Golgi autoantigen, golgin subfamily a, 5 
MLXIPL                0.005   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.005   Williams Beuren syndrome chromosome region 14 isofor...
MYH1                  0.005   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MLXIPL                0.004   Williams Beuren syndrome chromosome region 14 isofor...
ACAP3                 0.004   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
CYTH3                 0.004   cytohesin 3 
CENPE                 0.004   centromere protein E 
MYH7B                 0.004   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
C14orf38              0.004   PREDICTED: hypothetical protein 
C14orf38              0.004   PREDICTED: hypothetical protein 
C14orf38              0.004   PREDICTED: hypothetical protein 
MYH6                  0.004   myosin heavy chain 6 
NDC80                 0.004   kinetochore associated 2 
NIN                   0.004   ninein isoform 4 
NIN                   0.004   ninein isoform 5 
NIN                   0.004   ninein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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