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Search of human proteins with 90186264
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|90186264 ankyrin repeat domain 55 isoform 2 [Homo sapiens]
(326 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|90186267 ankyrin repeat domain 55 isoform 1 [Homo sapiens] 667 0.0
gi|90186264 ankyrin repeat domain 55 isoform 2 [Homo sapiens] 667 0.0
gi|4506901 splicing factor, arginine/serine-rich 3 [Homo sapiens] 36 0.041
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap... 35 0.069
gi|154146193 splicing factor, arginine/serine-rich 130 [Homo sap... 35 0.069
gi|12746412 ankyrin repeat, family A (RFXANK-like), 2 [Homo sapi... 34 0.15
gi|21956645 myotrophin [Homo sapiens] 33 0.26
gi|5454052 stratifin [Homo sapiens] 33 0.34
gi|47132529 suppression of tumorigenicity 5 isoform 1 [Homo sapi... 33 0.34
gi|47132532 suppression of tumorigenicity 5 isoform 1 [Homo sapi... 33 0.34
gi|117676384 splicing factor, arginine/serine-rich 2, interactin... 32 0.59
gi|53729327 nuclear receptor subfamily 6, group A, member 1 isof... 32 0.59
gi|42475558 SMG-7 homolog isoform 1 [Homo sapiens] 32 0.77
gi|42476066 SMG-7 homolog isoform 4 [Homo sapiens] 32 0.77
gi|42476070 SMG-7 homolog isoform 2 [Homo sapiens] 32 0.77
gi|30425444 ankyrin repeat and kinase domain containing 1 [Homo ... 31 1.3
gi|116805348 trinucleotide repeat containing 6A [Homo sapiens] 31 1.3
gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens] 31 1.3
gi|153792633 hypothetical protein LOC26049 [Homo sapiens] 31 1.3
gi|53729325 nuclear receptor subfamily 6, group A, member 1 isof... 31 1.3
gi|169202389 PREDICTED: similar to mCG50504 [Homo sapiens] 31 1.7
gi|38787957 tensin like C1 domain containing phosphatase isoform... 31 1.7
gi|38787941 tensin like C1 domain containing phosphatase isoform... 31 1.7
gi|40807469 TRAF interacting protein [Homo sapiens] 31 1.7
gi|25777624 ankyrin repeat and BTB (POZ) domain containing 1 iso... 31 1.7
gi|4503843 adaptor-related protein complex 1, gamma 2 subunit [H... 30 2.2
gi|67782365 keratin 7 [Homo sapiens] 30 2.9
gi|215598574 ankyrin 1 isoform 9 [Homo sapiens] 30 2.9
gi|70780359 ankyrin 1 isoform 1 [Homo sapiens] 30 2.9
gi|70780357 ankyrin 1 isoform 3 [Homo sapiens] 30 2.9
>gi|90186267 ankyrin repeat domain 55 isoform 1 [Homo sapiens]
Length = 614
Score = 667 bits (1722), Expect = 0.0
Identities = 326/326 (100%), Positives = 326/326 (100%)
Query: 1 MDSNLRDINESTPLAYALYCGHTACVKLLSQESRTEPTRPPPSQSSRPQKKERRFNVLNQ 60
MDSNLRDINESTPLAYALYCGHTACVKLLSQESRTEPTRPPPSQSSRPQKKERRFNVLNQ
Sbjct: 289 MDSNLRDINESTPLAYALYCGHTACVKLLSQESRTEPTRPPPSQSSRPQKKERRFNVLNQ 348
Query: 61 IFCKNKKEEQRAHQKDPSRDRYREEDTSEVNDIITTFDSIVGTNCQEQPGDQVAMVEFKK 120
IFCKNKKEEQRAHQKDPSRDRYREEDTSEVNDIITTFDSIVGTNCQEQPGDQVAMVEFKK
Sbjct: 349 IFCKNKKEEQRAHQKDPSRDRYREEDTSEVNDIITTFDSIVGTNCQEQPGDQVAMVEFKK 408
Query: 121 KTSDNSKYLLPEKKPLARKGLPPIRTQSLPPITLGNNFLTASHRATSHAGLSSAPHHMAQ 180
KTSDNSKYLLPEKKPLARKGLPPIRTQSLPPITLGNNFLTASHRATSHAGLSSAPHHMAQ
Sbjct: 409 KTSDNSKYLLPEKKPLARKGLPPIRTQSLPPITLGNNFLTASHRATSHAGLSSAPHHMAQ 468
Query: 181 RSQKSRSEQDLLNNRTGCQMLLDNPWKSDSNQVFSYKVWTVSSSDKLLDRLLSVRPGHQE 240
RSQKSRSEQDLLNNRTGCQMLLDNPWKSDSNQVFSYKVWTVSSSDKLLDRLLSVRPGHQE
Sbjct: 469 RSQKSRSEQDLLNNRTGCQMLLDNPWKSDSNQVFSYKVWTVSSSDKLLDRLLSVRPGHQE 528
Query: 241 VSVPPHLRHLHNPSSGQNFQHLSPNRHKIRDLPFTRNNLAPLPDQKFLSGEPLRTNRVLP 300
VSVPPHLRHLHNPSSGQNFQHLSPNRHKIRDLPFTRNNLAPLPDQKFLSGEPLRTNRVLP
Sbjct: 529 VSVPPHLRHLHNPSSGQNFQHLSPNRHKIRDLPFTRNNLAPLPDQKFLSGEPLRTNRVLP 588
Query: 301 AIPSQRRHSTAAEESEHSANPTSDEN 326
AIPSQRRHSTAAEESEHSANPTSDEN
Sbjct: 589 AIPSQRRHSTAAEESEHSANPTSDEN 614
>gi|90186264 ankyrin repeat domain 55 isoform 2 [Homo sapiens]
Length = 326
Score = 667 bits (1722), Expect = 0.0
Identities = 326/326 (100%), Positives = 326/326 (100%)
Query: 1 MDSNLRDINESTPLAYALYCGHTACVKLLSQESRTEPTRPPPSQSSRPQKKERRFNVLNQ 60
MDSNLRDINESTPLAYALYCGHTACVKLLSQESRTEPTRPPPSQSSRPQKKERRFNVLNQ
Sbjct: 1 MDSNLRDINESTPLAYALYCGHTACVKLLSQESRTEPTRPPPSQSSRPQKKERRFNVLNQ 60
Query: 61 IFCKNKKEEQRAHQKDPSRDRYREEDTSEVNDIITTFDSIVGTNCQEQPGDQVAMVEFKK 120
IFCKNKKEEQRAHQKDPSRDRYREEDTSEVNDIITTFDSIVGTNCQEQPGDQVAMVEFKK
Sbjct: 61 IFCKNKKEEQRAHQKDPSRDRYREEDTSEVNDIITTFDSIVGTNCQEQPGDQVAMVEFKK 120
Query: 121 KTSDNSKYLLPEKKPLARKGLPPIRTQSLPPITLGNNFLTASHRATSHAGLSSAPHHMAQ 180
KTSDNSKYLLPEKKPLARKGLPPIRTQSLPPITLGNNFLTASHRATSHAGLSSAPHHMAQ
Sbjct: 121 KTSDNSKYLLPEKKPLARKGLPPIRTQSLPPITLGNNFLTASHRATSHAGLSSAPHHMAQ 180
Query: 181 RSQKSRSEQDLLNNRTGCQMLLDNPWKSDSNQVFSYKVWTVSSSDKLLDRLLSVRPGHQE 240
RSQKSRSEQDLLNNRTGCQMLLDNPWKSDSNQVFSYKVWTVSSSDKLLDRLLSVRPGHQE
Sbjct: 181 RSQKSRSEQDLLNNRTGCQMLLDNPWKSDSNQVFSYKVWTVSSSDKLLDRLLSVRPGHQE 240
Query: 241 VSVPPHLRHLHNPSSGQNFQHLSPNRHKIRDLPFTRNNLAPLPDQKFLSGEPLRTNRVLP 300
VSVPPHLRHLHNPSSGQNFQHLSPNRHKIRDLPFTRNNLAPLPDQKFLSGEPLRTNRVLP
Sbjct: 241 VSVPPHLRHLHNPSSGQNFQHLSPNRHKIRDLPFTRNNLAPLPDQKFLSGEPLRTNRVLP 300
Query: 301 AIPSQRRHSTAAEESEHSANPTSDEN 326
AIPSQRRHSTAAEESEHSANPTSDEN
Sbjct: 301 AIPSQRRHSTAAEESEHSANPTSDEN 326
>gi|4506901 splicing factor, arginine/serine-rich 3 [Homo sapiens]
Length = 164
Score = 36.2 bits (82), Expect = 0.041
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 20 CGHTACVKLLSQESRTEPTRPPPSQSSRPQKKERRFNVLNQIFCKNKKEEQRAHQKDPSR 79
CG V+L + E R+ PPPS RP+ RR + + ++ R+ + SR
Sbjct: 72 CGCRVRVELSNGEKRSRNRGPPPSWGRRPRDDYRRRSPPPRRRSPRRRSFSRSRSRSLSR 131
Query: 80 DRYREEDTS 88
DR RE S
Sbjct: 132 DRRRERSLS 140
>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 35.4 bits (80), Expect = 0.069
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 6/160 (3%)
Query: 30 SQESRTEPTRPPPSQSSRPQKKERRFNVLNQIFCKNKKEEQRAHQKDPSRDRYR-EEDTS 88
S++ R++ R S + ++ R + F + +KE+Q H K ++ + E T
Sbjct: 396 SEDERSD--RGSESSDTDDEELRHRIRQKQEAFWRKEKEQQLLHDKQMEEEKQQTERVTK 453
Query: 89 EVNDII-TTFDSIVGTNCQEQPGDQVAMVEFKKKTSDNSKYLLPEKKPLARKGLPPIRTQ 147
E+N+ I +S+ +E GD V E K+ ++ + L P+K+ ++ R+
Sbjct: 454 EMNEFIHKEQNSLSLLEAREADGDVVN--EKKRTPNETTSVLEPKKEHKEKEKQGRSRSG 511
Query: 148 SLPPITLGNNFLTASHRATSHAGLSSAPHHMAQRSQKSRS 187
S + +N T+S +T + S+ ++ S +S S
Sbjct: 512 SSSSGSSSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSS 551
>gi|154146193 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 35.4 bits (80), Expect = 0.069
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 6/160 (3%)
Query: 30 SQESRTEPTRPPPSQSSRPQKKERRFNVLNQIFCKNKKEEQRAHQKDPSRDRYR-EEDTS 88
S++ R++ R S + ++ R + F + +KE+Q H K ++ + E T
Sbjct: 396 SEDERSD--RGSESSDTDDEELRHRIRQKQEAFWRKEKEQQLLHDKQMEEEKQQTERVTK 453
Query: 89 EVNDII-TTFDSIVGTNCQEQPGDQVAMVEFKKKTSDNSKYLLPEKKPLARKGLPPIRTQ 147
E+N+ I +S+ +E GD V E K+ ++ + L P+K+ ++ R+
Sbjct: 454 EMNEFIHKEQNSLSLLEAREADGDVVN--EKKRTPNETTSVLEPKKEHKEKEKQGRSRSG 511
Query: 148 SLPPITLGNNFLTASHRATSHAGLSSAPHHMAQRSQKSRS 187
S + +N T+S +T + S+ ++ S +S S
Sbjct: 512 SSSSGSSSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSS 551
>gi|12746412 ankyrin repeat, family A (RFXANK-like), 2 [Homo
sapiens]
Length = 313
Score = 34.3 bits (77), Expect = 0.15
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 1 MDSNLRDINESTPLAYALYCGHTACVKLLSQESRTEPT 38
+D N D N TPL YA++ H CVK+L ES +PT
Sbjct: 239 VDVNEYDWNGGTPLLYAVHGNHVKCVKML-LESGADPT 275
>gi|21956645 myotrophin [Homo sapiens]
Length = 118
Score = 33.5 bits (75), Expect = 0.26
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 2 DSNLRDINESTPLAYALYCGHTACVKLLSQESRTEPTRPP 41
D N D + TPL A+Y GH +CVKLL + + + P
Sbjct: 60 DINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGP 99
>gi|5454052 stratifin [Homo sapiens]
Length = 248
Score = 33.1 bits (74), Expect = 0.34
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 26/120 (21%)
Query: 55 FNVLNQIFCKNKKEEQRAHQKDPSRDRYREEDTSEVNDIITTFDSIVGTNCQEQPGD--- 111
+ VL+ I + K E+ + +K P YRE+ +E+ + T ++ ++ ++ GD
Sbjct: 59 WRVLSSI--EQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAES 116
Query: 112 ----------------QVAMVEFKKKTSDNSKYLLPEKKPLARKGLPPIRTQSLPPITLG 155
+VA + KK+ D+++ E +++K +PP PI LG
Sbjct: 117 RVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTN-----PIRLG 171
>gi|47132529 suppression of tumorigenicity 5 isoform 1 [Homo
sapiens]
Length = 1137
Score = 33.1 bits (74), Expect = 0.34
Identities = 39/178 (21%), Positives = 59/178 (33%), Gaps = 36/178 (20%)
Query: 37 PTRPPPSQSSRPQKKERRFNVLNQIFCKNKKEEQRAHQKDPSRDRYREEDTSEVNDIITT 96
P PPP S+ RR K++ R H+K SR + ED S + + +
Sbjct: 416 PAAPPPLPSTPAPPVTRR-----------PKKDMRGHRKSQSRKSFEFEDASSLQSLYPS 464
Query: 97 FDSIVGTNCQEQPGDQVAM--------------------VEFKKKTSDNSKYLLPEKK-- 134
+ GT Q + G + + V+ K + + L E
Sbjct: 465 SPTENGTENQPKFGSKSTLEENAYEDIVGDLPKENPYEDVDLKSRRAGRKSQQLSENSLD 524
Query: 135 PLARKGLPPIRTQSLPPITLGNNFLTASHRATSHAGLSSAPHHMAQRSQKSRSEQDLL 192
L R P R + PP L L + ++ S H R K S D+L
Sbjct: 525 SLHRMWSPQDRKYNSPPTQLS---LKPNSQSLRSGNWSERKSHRLPRLPKRHSHDDML 579
>gi|47132532 suppression of tumorigenicity 5 isoform 1 [Homo
sapiens]
Length = 1137
Score = 33.1 bits (74), Expect = 0.34
Identities = 39/178 (21%), Positives = 59/178 (33%), Gaps = 36/178 (20%)
Query: 37 PTRPPPSQSSRPQKKERRFNVLNQIFCKNKKEEQRAHQKDPSRDRYREEDTSEVNDIITT 96
P PPP S+ RR K++ R H+K SR + ED S + + +
Sbjct: 416 PAAPPPLPSTPAPPVTRR-----------PKKDMRGHRKSQSRKSFEFEDASSLQSLYPS 464
Query: 97 FDSIVGTNCQEQPGDQVAM--------------------VEFKKKTSDNSKYLLPEKK-- 134
+ GT Q + G + + V+ K + + L E
Sbjct: 465 SPTENGTENQPKFGSKSTLEENAYEDIVGDLPKENPYEDVDLKSRRAGRKSQQLSENSLD 524
Query: 135 PLARKGLPPIRTQSLPPITLGNNFLTASHRATSHAGLSSAPHHMAQRSQKSRSEQDLL 192
L R P R + PP L L + ++ S H R K S D+L
Sbjct: 525 SLHRMWSPQDRKYNSPPTQLS---LKPNSQSLRSGNWSERKSHRLPRLPKRHSHDDML 579
>gi|117676384 splicing factor, arginine/serine-rich 2, interacting
protein [Homo sapiens]
Length = 1463
Score = 32.3 bits (72), Expect = 0.59
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 31 QESRTEPTRPPPSQSSRPQKKERRFNVLNQIFCKNKKEEQRAHQKDPSRDRYREEDTS 88
+ESR + P ++S+R +KK R + I + ++ + R+ ++D +R+ R E S
Sbjct: 825 KESRKSQSPSPKNESARGRKKSRSQSPKKDIARERRQSQSRSPKRDTTRESRRSESLS 882
>gi|53729327 nuclear receptor subfamily 6, group A, member 1 isoform
2 [Homo sapiens]
Length = 475
Score = 32.3 bits (72), Expect = 0.59
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 27/158 (17%)
Query: 133 KKPLARKGLPPIRTQSLPPITLGNNFLTASHRATSHAGLSSAPHHMAQRSQKSRSEQDLL 192
+K + G+P R +S+ P+ + + R S +H + S
Sbjct: 123 RKAIREDGMPGGRNKSIGPVQISEEEI---ERIMSGQEFEEEANHWSNHGDSDHSSP--- 176
Query: 193 NNRTGCQMLLDNPWKSDSNQVFSYKVWTVSSSDKLLDRLLSVRPGHQEVSVPPHLRHL-- 250
NR S+SNQ T+SS L+ ++ R + +SVPPH +++
Sbjct: 177 GNRA-----------SESNQPSPGS--TLSSRSVELNGFMAFREQYMGMSVPPHYQYIPH 223
Query: 251 ------HNPSSGQNFQHLSPNRHKIRDLPFTRNNLAPL 282
H+P Q + L P + + + +L PL
Sbjct: 224 LFSYSGHSPLLPQQARSLDPQSYSLIHQLLSAEDLEPL 261
>gi|42475558 SMG-7 homolog isoform 1 [Homo sapiens]
Length = 1137
Score = 32.0 bits (71), Expect = 0.77
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 300 PAIPSQRRHSTAAEESEHSANPTS 323
P++P+ HST A +S HS+NP+S
Sbjct: 988 PSLPASSDHSTPASQSPHSSNPSS 1011
>gi|42476066 SMG-7 homolog isoform 4 [Homo sapiens]
Length = 1049
Score = 32.0 bits (71), Expect = 0.77
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 300 PAIPSQRRHSTAAEESEHSANPTS 323
P++P+ HST A +S HS+NP+S
Sbjct: 900 PSLPASSDHSTPASQSPHSSNPSS 923
>gi|42476070 SMG-7 homolog isoform 2 [Homo sapiens]
Length = 1091
Score = 32.0 bits (71), Expect = 0.77
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 300 PAIPSQRRHSTAAEESEHSANPTS 323
P++P+ HST A +S HS+NP+S
Sbjct: 942 PSLPASSDHSTPASQSPHSSNPSS 965
>gi|30425444 ankyrin repeat and kinase domain containing 1 [Homo
sapiens]
Length = 765
Score = 31.2 bits (69), Expect = 1.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 2 DSNLRDINESTPLAYALYCGHTACVKLLSQE 32
D NL + TPL A Y GH + VKLL+ +
Sbjct: 486 DPNLHEAEGKTPLHVAAYFGHVSLVKLLTSQ 516
>gi|116805348 trinucleotide repeat containing 6A [Homo sapiens]
Length = 1962
Score = 31.2 bits (69), Expect = 1.3
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 34/133 (25%)
Query: 27 KLLSQESRTEPTRPPPSQSSRPQKKE--RRFNVLNQIFCKNKKEEQRAHQKDPSRDRYRE 84
+LL+Q+ R + R PS +RPQ+ + R +V Q+ Q++ Q DP+ ++
Sbjct: 1418 RLLAQQQRAQSQRSVPS-GNRPQQDQQGRPLSVQQQMM-------QQSRQLDPNLLVKQQ 1469
Query: 85 EDTSEVNDIITTFDSIVGTNCQEQPGDQVAMVEFKKKTSDNSKYLLPEKKPLARKGLPPI 144
S Q+QP Q AM F DN ++P P +KG PI
Sbjct: 1470 TPPS-----------------QQQPLHQPAMKSFL----DN---VMPHTTPELQKGPSPI 1505
Query: 145 RTQSLPPITLGNN 157
S PI L +N
Sbjct: 1506 NAFSNFPIGLNSN 1518
>gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens]
Length = 2769
Score = 31.2 bits (69), Expect = 1.3
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 244 PPHLRHLHNPSSGQNFQHLSPNRHKIRDLPFT-RNNLAPLPDQKFLSGEP 292
PP L H H P+ QH + + + + FT R+N +P P LSGEP
Sbjct: 180 PPPLSHAHTPN-----QHHAASINSLNRGNFTPRSNPSPAPTDHSLSGEP 224
>gi|153792633 hypothetical protein LOC26049 [Homo sapiens]
Length = 670
Score = 31.2 bits (69), Expect = 1.3
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Query: 225 DKLLDRLLSVRPGHQEVSVPPHLR--HLHNPSSGQNFQHLSPNRHKIRDLPFTRNNLAPL 282
D L D S GH + SV H R +L P G+ FQ + + D ++ +L
Sbjct: 306 DSLKDAFASTSEGHDKTSVSTHTRSGNLKRPKIGKRFQDSEFSSSQGEDEKTSQTSLTAS 365
Query: 283 PDQKFLSGEPLRTN-RVLPAIPSQRRHSTAAEESEHSANP 321
++ + P ++ L P QR E S+ A P
Sbjct: 366 INKLESTARPSESSEEFLEEEPEQRGIEFEDESSDRDARP 405
>gi|53729325 nuclear receptor subfamily 6, group A, member 1 isoform
1 [Homo sapiens]
Length = 480
Score = 31.2 bits (69), Expect = 1.3
Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 28/159 (17%)
Query: 133 KKPLARKGLPPIRTQSLPPITLGNNFLTASHRATSHAGLSSAPHHMAQRSQKSRSEQDLL 192
+K + G+P R +S+ P+ + + R S +H + S
Sbjct: 127 RKAIREDGMPGGRNKSIGPVQISEEEI---ERIMSGQEFEEEANHWSNHGDSDHSSP--- 180
Query: 193 NNRTGCQMLLDNPWKSDSNQVFSYKVWTVSSSDKL-LDRLLSVRPGHQEVSVPPHLRHL- 250
NR S+SNQ T+SSS + L+ ++ R + +SVPPH +++
Sbjct: 181 GNRA-----------SESNQPSPGS--TLSSSRSVELNGFMAFREQYMGMSVPPHYQYIP 227
Query: 251 -------HNPSSGQNFQHLSPNRHKIRDLPFTRNNLAPL 282
H+P Q + L P + + + +L PL
Sbjct: 228 HLFSYSGHSPLLPQQARSLDPQSYSLIHQLLSAEDLEPL 266
>gi|169202389 PREDICTED: similar to mCG50504 [Homo sapiens]
Length = 189
Score = 30.8 bits (68), Expect = 1.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 27 KLLSQESRTEPTRPPPSQSSRPQK 50
KL +E RT+P+RPPP + +R K
Sbjct: 108 KLHREEDRTDPSRPPPKEPTRGSK 131
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 30.8 bits (68), Expect = 1.7
Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 31/128 (24%)
Query: 147 QSLPPITLGNNFLTASHRATSHAGLSSAPHHMAQRSQKSRSEQDLLNNRTGCQMLLDNPW 206
Q+LPP+ L N TA R H G + + +H QRS RS L++ W
Sbjct: 80 QALPPVELRRN--TAPVRRIEHLGSTKSLNHSKQRSTLPRS--------FSLDPLMERRW 129
Query: 207 KSDSNQVFSYKVWTVSSSDKLLDRLLSVRPGHQEVSVPPHLRHLHNPSSGQNFQHLSPNR 266
D V ++++L RP Q H HL + H+ ++
Sbjct: 130 DLDLTYV----------TERILAAAFPARPDEQR-----HRGHL------RELAHVLQSK 168
Query: 267 HKIRDLPF 274
H+ + L F
Sbjct: 169 HRDKYLLF 176
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 30.8 bits (68), Expect = 1.7
Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 31/128 (24%)
Query: 147 QSLPPITLGNNFLTASHRATSHAGLSSAPHHMAQRSQKSRSEQDLLNNRTGCQMLLDNPW 206
Q+LPP+ L N TA R H G + + +H QRS RS L++ W
Sbjct: 90 QALPPVELRRN--TAPVRRIEHLGSTKSLNHSKQRSTLPRS--------FSLDPLMERRW 139
Query: 207 KSDSNQVFSYKVWTVSSSDKLLDRLLSVRPGHQEVSVPPHLRHLHNPSSGQNFQHLSPNR 266
D V ++++L RP Q H HL + H+ ++
Sbjct: 140 DLDLTYV----------TERILAAAFPARPDEQR-----HRGHL------RELAHVLQSK 178
Query: 267 HKIRDLPF 274
H+ + L F
Sbjct: 179 HRDKYLLF 186
>gi|40807469 TRAF interacting protein [Homo sapiens]
Length = 469
Score = 30.8 bits (68), Expect = 1.7
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 13/76 (17%)
Query: 17 ALYCGHTACVKLLSQESRTEPTRPPPSQSSRPQKK-----------ERRFNVLNQIFCKN 65
A++CGHT ++ L Q T P+R P + K+ + NVL+ F KN
Sbjct: 22 AIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIINKLFFDLAQEEENVLDAEFLKN 81
Query: 66 KKEEQRAH--QKDPSR 79
+ + RA QKD +
Sbjct: 82 ELDNVRAQLSQKDKEK 97
>gi|25777624 ankyrin repeat and BTB (POZ) domain containing 1
isoform 2 [Homo sapiens]
Length = 478
Score = 30.8 bits (68), Expect = 1.7
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 1 MDSNLRDINESTPLAYALYCGHTACV-KLLSQESRTE 36
++ N+RD +STPL YA CGH V LL+ +R E
Sbjct: 27 VEVNVRDKWDSTPLYYACLCGHEELVLYLLANGARCE 63
>gi|4503843 adaptor-related protein complex 1, gamma 2 subunit [Homo
sapiens]
Length = 785
Score = 30.4 bits (67), Expect = 2.2
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 11/77 (14%)
Query: 220 TVSSSDKLLDRLLSVRPGHQEVSVPPHLRHLHNPSSGQNFQHLSPNRHKIRDLPFTRNNL 279
T + +LLD L + +V PPHL +PS G HL DLP
Sbjct: 616 TEPQASQLLDLLDLLDGASGDVQHPPHL----DPSPGGALVHLL-------DLPCVPPPP 664
Query: 280 APLPDQKFLSGEPLRTN 296
AP+PD K E ++ N
Sbjct: 665 APIPDLKVFEREGVQLN 681
>gi|67782365 keratin 7 [Homo sapiens]
Length = 469
Score = 30.0 bits (66), Expect = 2.9
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 76 DPSRDRYREEDTSEVNDIITTFDSIVGTNCQEQPGDQVAMVEFKKKTSDNSKYLLPEKKP 135
DPS R R+E++ ++ + F S + D+V +E + K + LL E+K
Sbjct: 81 DPSLQRVRQEESEQIKTLNNKFASFI---------DKVRFLEQQNKLLETKWTLLQEQKS 131
Query: 136 LARKGLPPI 144
LP I
Sbjct: 132 AKSSRLPDI 140
>gi|215598574 ankyrin 1 isoform 9 [Homo sapiens]
Length = 1897
Score = 30.0 bits (66), Expect = 2.9
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 68 EEQRAHQKDPSRDRYREEDTSEVNDIITTFDSIV-GTNCQEQPGDQVAMVEF 118
E+ A RDR ++ +V + TF +V G Q PG+QV +F
Sbjct: 1805 EQPEAESSQADRDRRQQGQEEQVQEAKNTFTQVVQGNEFQNIPGEQVTEEQF 1856
>gi|70780359 ankyrin 1 isoform 1 [Homo sapiens]
Length = 1881
Score = 30.0 bits (66), Expect = 2.9
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 68 EEQRAHQKDPSRDRYREEDTSEVNDIITTFDSIV-GTNCQEQPGDQVAMVEF 118
E+ A RDR ++ +V + TF +V G Q PG+QV +F
Sbjct: 1764 EQPEAESSQADRDRRQQGQEEQVQEAKNTFTQVVQGNEFQNIPGEQVTEEQF 1815
>gi|70780357 ankyrin 1 isoform 3 [Homo sapiens]
Length = 1880
Score = 30.0 bits (66), Expect = 2.9
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 68 EEQRAHQKDPSRDRYREEDTSEVNDIITTFDSIV-GTNCQEQPGDQVAMVEF 118
E+ A RDR ++ +V + TF +V G Q PG+QV +F
Sbjct: 1764 EQPEAESSQADRDRRQQGQEEQVQEAKNTFTQVVQGNEFQNIPGEQVTEEQF 1815
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.127 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,426,065
Number of Sequences: 37866
Number of extensions: 697588
Number of successful extensions: 2671
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 2614
Number of HSP's gapped (non-prelim): 121
length of query: 326
length of database: 18,247,518
effective HSP length: 103
effective length of query: 223
effective length of database: 14,347,320
effective search space: 3199452360
effective search space used: 3199452360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.